Cloning of cell-specific secreted and surface proteins by subtractive antibody screening

Nature Biotechnology

Volumn 16, Issue 6, 1998, Pages 581-586

  Scherer, Philipp E ^a,e   Bickel, Perry E ^a,b   Kotler, Mariana ^a,c   Lodish, Harvey F ^a,d  

^a WHITEHEAD INSTITUTE FOR BIOMEDICAL RESEARCH   (United States)

^b MASSACHUSETTS GENERAL HOSPITAL   (United States)

^c MASSACHUSETTS INSTITUTE OF TECHNOLOGY   (United States)

^d ALBERT EINSTEIN COLLEGE OF MEDICINE   (United States)

^e WASHINGTON UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

Adipocyte; Differential expression

Indexed keywords

CELL SURFACE PROTEIN; COMPLEMENTARY DNA;

ADIPOCYTE; ANIMAL CELL; ARTICLE; CELL DIFFERENTIATION; CONTROLLED STUDY; DNA LIBRARY; GENE EXPRESSION REGULATION; GENE ISOLATION; MOLECULAR CLONING; MOUSE; NONHUMAN; PRIORITY JOURNAL; PROTEIN DETERMINATION;

3T3 CELLS; ADIPOCYTES; AMINO ACID SEQUENCE; ANIMALS; ANTIBODY SPECIFICITY; CELL LINE; CLONING, MOLECULAR; COLLAGEN; IMMUNE SERA; MEMBRANE PROTEINS; MICE; MOLECULAR SEQUENCE DATA; PRECIPITATION; REPRODUCIBILITY OF RESULTS;

ANIMALIA;

EID: 0031810251     PISSN: 10870156     EISSN: None     Source Type: Journal    
DOI: 10.1038/nbt0698-581     Document Type: Article

References (47)

1. Barr, V.A., Malide, D., Zarnowski, M.J., Taylor, S.I., and Cushman, S.W. 1997. Insulin stimulates both leptin secretion and production by rat white adipose tissue. Endocrinology 138:4463-4472.
2. Kitagawa, K., Rosen, B.S., Spiegelman, B.M., üenhard, G.E., and Tanner, LI. 1989. Insulin stimulates the acute release of adipsin from 3T3-L1 adipocytes. Biochim. Biophys. Acta. 1014:83-89.
3. Scherer, P.E., Williams, S., Fogliano, M., Baldini, G., and Lodish, H.F. 1995. A novel serum protein similar to C1q, produced exclusively in adipocytes. J. Biol. Chem. 270:26745-26749.
4. Sapperstein, S.K., Walter, D.M., Grosvenor, A.R., Heuser, U.E., and Waters, M.G. 1995. p115 is a general vesicular transport factor related to the yeast endoplasmic reticulum to Golgi transport factor Usolp. Proc. Natl. Acad. Sci. USA 92:522-526.
5. Spiegelman, B.M. and Ginty, C.A. 1983. Fibronectin modulation of cell shape and lipogenic gene expression in 3T3-adipocytes. Cell 35:657-666.
6. Cianflone, K. and Maslowska, M. 1995. Differentiation-induced production of ASP in human adipocytes. Eur. J. Clin. Invest. 25:817-825.
7. Lane, T.F. and Sage, E.H. 1994. The biology of SPARC, a protein that modulates cell-matrix interactions. EASES J. 8:163-173.
8. Prowse, K.R. and Baumann, H. 1990. Molecular characterization and acute phase expression of the multiple Mus caroli alpha 1-acid glycoprotein (AGP) genes. Differences in glucocorticoid stimulation and regulatory elements between the rat and mouse AGP genes. J. Biol. Chem. 265:10201-10209.
9. Chu, M.-L., Zhang, R.-Z., Pan, T., Stokes, D., Conway, D., Kuo, H.-J. et al. 1990. Mosaic structure of globular domains in the human type VI collagen a3 chain: . similarity to von Willebrand Factor, fibronectin, actin, salivary proteins and apro-tinin type protease inhibitors. EMBOJ. (9)2:385-393.
10. Engvall, E., Hessle, H., and Klier, G. 1986. Molecular assembly, secretion, and matrix deposition of type VI collagen. J. Cell. Biol. 102:703-710.
11. Misra, K.B., Kim, K.C., Cho, S., Low, M.G., and Bensadoun, A. 1994. Purification and characterization of adipocyte heparan sulfate proteoglycans with affinity for lipoprotein lipase. J. Biol. Chem. 269:23838-23844.
12. Olivecrona, T., Chernick, S.S., Bengtsson-Olivecrona, G., Garrison, M., and Scow, R.O. 1987. Synthesis and secretion of lipoprotein lipase in 3T3-L1 adipocytes. Demonstration of inactive forms of lipase in cells. J. Biol. Chem. 262:10748-10759.
13. Mu, D., Medzihradszky, K.F., Adams, G.W., Mayer, P., Mines, W.M. et al. 1994. Primary structures for a mammalian cellular and serum copper amine oxidase. J. Biol. Chem. 269:9926-9932.
14. Barrand, M.A. and Callingham, B.A. 1984. Solubilization and some properties of a semicarbazide-sensitive amine oxidase in brown adipose tissue of the rat. Biochem. J. 222:467-475.
15. Raimondi, L, Pirisino, R., Ignesti, G., Capecchi, S., Banchelli, G., and Buffoni, F. 1991. Semicarbazide-sensitive amine oxidase activity (SSAO) of rat epididymal white adipose tissue. Biochem. Pharmacol. 41:467-470.
16. McKnight, G.L, Reasoner, J., Gilbert, T., Sundquist, K.O., Hokland, B., McKernan, P.A. et al. 1992. Cloning and expression of a cellular high density lipoprotein-binding protein that is up-regulated by cholesterol loading of cells. J. Biol. Chem. 267:12131-12141.
17. Schmidt, C., Henkel, B., Poschl, E., Zorbas, H., Purschke, W.G., Gloe, T.R., and Muller, P.K. 1992. Complete cDNA sequence of chicken vigilin, a novel protein with amplified and evolutionary conserved domains. Eur. J. Biochem. 206:625-634.
18. Hokland, B., Mendez, A. J., and Oram, J.F. 1992. Cellular localization and characterization of proteins that bind high density lipoprotein. J. Lipid. Res. 33:1335-1342.
19. Chiu, D.S., Oram, J.F., LeBoeuf, R.C., Alpers, C.E.. and O'Brien, K.D. 1997. Highdensity lipoprotein-binding protein (HBP)/vigilin is expressed in human atherosclerotic lesions and colocalizes with apolipoprotein E. /Arteriöse/er. Thromb. Vase. Biol. 17:2350-2358.
20. Kruse, C., Grunweller, A., Notbohm, H., Kugler, S., Purschke, W.G., and Muller, P.K. 1996. Evidence for a novel cytoplasmic tRNA-protein complex containing the KH-multidomain protein vigilin. Biochem. J. 320:247-252.
21. Dodson, R.E. and Shapiro, D.J. 1997. Vigilin, a ubiquitous protein with 14 K homology domains, is the estrogen-inducible vitellogenin mRNA 3'-untranslated region-binding protein. J. Blol. Chem. 272:12249-12252.
22. Kugler, S., Grunweller, A., Probst, C., Künger, M., Muller, P.K., and Kruse, C. 1996. Vigilin contains a functional nuclear localisation sequence and is present in both the cytoplasm and the nucleus. FEBS Le. 382:330-334.
23. Seulberger, H., Unger, C.M., and Risau, W. 1992. HT7, Neurothelin, Basigin, gp42 and OX-47-many names for one developmentally regulated immuno-globulinlike surface glycoprotein on blood-brain barrier endothelium, epithelial tissue barriers and neurons. Neurosci. Lett. 140:93-97.
24. Seulberger, H., Lottspeich, R, and Risau, W. 1990. The inducible blood-brain barrier specific molecule HT7 is a novel immunoglobulin-like cell surface glycoprotein. EMBO J. 9:2151-2158.
25. Biswas, C., Zhang, Y, De Castro, R., Guo, H., Nakamura, T., Kataoka, H., and Nabeshima, K. 1995. The human tumor cell-derived collagenase stimulatory factor (renamed EMMPRIN) is a member of the immunoglobulin superfamily. Cancer Research 55:434-439.
26. Nehme, C.L., Fayos, B.E., and Bartles, J.R. 1995. Distribution of the integral plasma membrane glycoprotein CE9 (MRC OX-47) among rat tissues and its induction by diverse stimuli of metabolic activation. Biochem. J. 310:693-698.
27. Jiang, H.P. and Serrera, G. 1992. Isolation and characterization of a full-length cDNA coding for an adipose differentiation-related protein. Proc. Natl. Acad. Sei USA 89:7856-7860.
28. Onishi, M., Kinoshita, S., Morikawa, Y., Shibuya, A., Phillips, J., Lanier, L.L. et al. 1996. Applications of retrovirus-mediated expression cloning. Exp. Hematol. 24:324-329.
29. Seed, B. and Aruffo, A. 1987. Molecular cloning of the CD2 antigen, the T-cell erythrocyte receptor, by a rapid immunoselection procedure. Proc. Natl. Acad. Sci. USA 84:3365-3369.
30. Kitamura, T., Onishi, M., Kinoshita, S., Shibuya, A., Miyajima, A., and Nolan, G.P. 1995. Efficient screening of retroviral cDNA expression libraries. Proc. Natl. Acad. Sci. USA 92:9146-9150.
31. Heid, H.W., Schnolzer, M., and Keenan, T.W. 1996. Adipocyte differentiationrelated protein is secreted into milk as a constituent of milk lipid globule membrane. Biochem. J. 320:1025-1030.
32. Tashiro, K., Tada, H., Heilker, R., Shirozu, M., Nakano, T., and Honjo, T. 1993. Signal sequence trap: a cloning strategy for secreted proteins and type I membrane proteins. Science 261:600-603.
33. Klein. R.D., Gu, Q., Goddard, A. and Rosenthal, A. 1996. Selection for genes encoding secreted proteins and receptors. Proc. Watt Acad. Sci. USA 93:7108-7113.
34. Sagerstrom, C.G., Sun, B.I., and Sive, H.L 1997. Subtractive cloning: past, present, and future. Annu. Rev. Biochem. 66:751-783.
35. Liang, P. and Pardee, A.B. 1992. Differential display of eukaryotic messenger RNA by means of the polymerase chain reaction. Science 257:967-971.
36. Matthew, W.O. and Sandrock, A.W. Jr. 1987. Cyclophosphamide treatment used to manipulate the immune response for the production of monoclonal antibodies. Journal of Immunological Methods 100:73-82.
37. Brooks, P.C., Lin, J.M.. French, D.L, and Quigley, J.P. 1993. Subtractive immunization yields monoclonal antibodies that specifically inhibit metastasis. J. Cell. B/oJ. 122:1351-1359.
38. de Kruif, J., Terstappen, L., Boel, E., and Logtenberg, T. 1995. Rapid selection of cell subpopulation-specific human monoclonal antibodies from a synthetic phage antibody library. Proc Natl Acad Sei USA 92:3938-3942.
39. Van Ewijk, W., de Kruif, J., Germeraad, W.T., Berendes, P., Ropke, C., Platenburg, P.P. and Logtenberg, T. 1997. Subtractive isolation of phage-displayed singlechain antibodies to thymic stromal cells by using intact thymic fragments. Proc. Wa. Acad. Sci. USA 94:3903-3908.
40. D'Andréa, A.D., Lodish, H.F., and Wong, G.G. 1989. Expression cloning of the murine erythropoietin receptor. Cell 57:277-285.
41. Frost, S.O. and Lane, M.D. 1985. Evidence for the involvement of vicinal sulfhydryl groups in insulin-activated hexose transport by 3T3-L1 adipocytes. J. B/oJ. Chem. 260:2646-2652.
42. Frangioni, J.V. and Neel, B.C. 1993. Solubilization and purification of enzymatically active GST (pGEX) fusion proteins. Anal. Biochem. 210:179-187.
43. Bickel, P.E., Scherer, P.E., Schnitzer, J.E., Oh, R, Lisanti, M.P., and Lodish, H.F. 1997. Flotillin and epidermal surface antigen define a new family of caveolaeassociated integral membrane proteins. J. B/oJ. Chem. 272:13793-13802.
44. Piper, R.C., Hess, L.J., and James, D.E. 1991. Differential sorting of two glucose transporters expressed in insulin-sensitive cells. Am. J. Physiol. 260:C570-580.
45. Laemmli, U.K. 1970. Cleavage of structural proteins during the assembly of the head of Bacteriophage T4. Nature 227:680-685.
46. Altschul, S.F., Gish, W., Miller, W., Myers, E.W., and Lipman, D.J. 1990. Basic local alignment search tool. J. Mol. B/oJ. 215:403-410.
47. Fuchs, R. 1994. Predicting protein function: a versatile tool for the Apple Macintosh. Comput. Appl. Biosci. 10:171-178.