Solution structure and peptide binding studies of the C-terminal Src homology 3-like domain of the diphtheria toxin repressor protein

Proceedings of the National Academy of Sciences of the United States of America

Volumn 96, Issue 11, 1999, Pages 6119-6124

  Wang, Guangshun ^a,b   Wylie, Gregory P ^a   Twigg, Pamela D ^a   Caspar, Donald L D ^a   Murphy, John R ^c   Logan, Timothy M ^a,b  

^a FLORIDA STATE UNIVERSITY   (United States)

^b FLORIDA STATE UNIVERSITY   (United States)

^c BOSTON UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DIPHTHERIA TOXIN; IRON; REPRESSOR PROTEIN;

ARTICLE; CARBOXY TERMINAL SEQUENCE; DIMERIZATION; DNA BINDING; GENE EXPRESSION; IRON TRANSPORT; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN CONFORMATION; PROTON NUCLEAR MAGNETIC RESONANCE; SEQUENCE HOMOLOGY; STRUCTURE ANALYSIS;

AMINO ACID SEQUENCE; BACTERIAL PROTEINS; BINDING SITES; CONSERVED SEQUENCE; DNA-BINDING PROTEINS; GRAM-POSITIVE BACTERIA; IRON; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; NUCLEAR MAGNETIC RESONANCE, BIOMOLECULAR; PEPTIDE FRAGMENTS; PROTEIN STRUCTURE, SECONDARY; RECOMBINANT PROTEINS; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY, AMINO ACID; SOLUTIONS; SRC HOMOLOGY DOMAINS;

BACTERIA (MICROORGANISMS); EUKARYOTA; POSIBACTERIA; PROKARYOTA;

EID: 0033057129     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.96.11.6119     Document Type: Article

References (49)

1. Tao, X., Schiering, N., Zeng, H.-Y., Ringe, D. & Murphy, J. R. (1994) Mol. Microbiol. 14, 191-197.
2. Pappenheimer, A. M. (1977) Annu. Rev. Biochem. 46, 69-94.
3. Schmitt, M. P. (1997) Infect. Immun. 65, 4634-4641.
4. Oguiza, J. A., Tao, X., Marcos, A. T., Martin, J. F. & Murphy, J. R. (1995) J. Bacteriol. 177, 465-467.
5. Schmitt, M. P., Predich, M., Doukhan, L., Smith, I. & Holmes, R. K. (1995) Infect. Immun. 63, 4284-4289.
6. Qiu, X., Verlinde, C. L. M. J., Zhang, S., Schmitt, M. P., Holmes, R. K. & Hol, W. G. J. (1995) Structure (London) 3, 87-100.
7. Schiering, N., Tao, X., Zeng, H.-Y., Murphy, J. R., Petsko, G. A. & Ringe D. (1995) Proc. Natl. Acad. Sci. USA 92, 9843-9850.
8. Ding, X., Zeng, H., Schiering, N., Ringe, D. & Murphy, J. R. (1996) Nat. Struct. Biol. 3, 382-387.
9. Qiu, X., Pohl, E., Holmes, R. K. & Hol, W. G. J. (1996) Biochemistry 35, 12292-12302.
10. Pohl, E., Holmes, R. K. & Hol, W. G. J. (1998) J. Biol. Chem. 273, 22420-22427.
11. White, A., Ding, X., vanderSpek, J. C, Murphy, J. R. & Ringe, D. (1998) Nature (London) 394, 502-506.
12. Sun, L., vanderSpek, J. C. & Murphy, J. R. (1998) Proc. Natl. Acad. Sci. USA 95, 14985-14990.
13. Schmitt, M. P. & Holmes, R. K. (1993) Mol. Microbiol. 9, 173-181.
14. Twigg, P. D., Wylie, G. P., Wang, G., Murphy, J. R., Caspar, D. L. D. & Logan, T. M. (1999) J. Biomol. NMR 13, 197-198.
15. Zhang, O., Kay, L. E., Olivier, J. P. & Forman-Kay, J. D. (1994) J. Biomol. NMR 4, 845-858.
16. Vuister, G., Clore, G. M., Gronenborn, A. M., Powers, R., Garret, D. S., Tschudin, R. & Bax, A. (1993) J. Magn. Reson. 101, 210-213.
17. Callihan, D., West, J., Kumar, S., Schweitzer, B. I. & Logan, T. M. (1996) J. Magn. Reson. 112, 82-85.
18. Kuboniwa, H., Grzesiek, S., Delagio, F. & Bax, A. (1994) J. Biomol. NMR 4, 871-878.
19. Kay, L. E. & Bax, A. (1990) J. Magn. Reson. 86, 110-126.
20. Farrow, N. A., Muhandiram, R., Singer, A. U., Pascal, S. M., Kay, C. M., Gish, G., Shoelson, S. E., Pawson, T., Forman-Kay, J. D. & Kay, L. E. (1994) Biochemistry 33, 5984-6003.
21. Delaglio, F., Grzesiek, S., Vuister, G. W., Zhu, G., Pfeifer, J. & Bax, A. (1995) J. Biomol. NMR 6, 277-293.
22. Johnson, B. A. & Blevins, R. A. (1994) J. Biomol. NMR 4, 603-614.
23. Brünger, A. T. (1992) X-PLOR:A System for X-Ray Crystallography and NMR (Yale Univ. Press, New Haven), Version 3.1.
24. Fletcher, C. M., Jones, D. N. M., Diamond, R. & Neuhaus, D. (1996) J. Biomol. NMR 8, 292-310.
25. Wuthrich, K. (1986) NMR of Proteins and Nucleic Acids (Wiley, New York).
26. Briercheck, D. M., Wood, T. C., Allison, T. J., Richardson, J. P. & Rule, G. S. (1998) Nat. Struct. Biol. 5, 393-399.
27. Koradi, R., Billeter, M. & Wuthrich, K. (1996) J. Mol. Graphics 14, 51-55.
28. Laskowski, R. A., Rullmann, J. A. C., MacArthur, M. W., Kaptein, R. & Thornton, J. M. (1996) J. Biomol. NMR. 8, 477-486.
29. Kay, L. E., Keifer, P. & Saarinen, T. (1992) J. Am. Chem. Soc. 114, 10663-10665.
30. Wishart, D. S. & Sykes, B. D. (1994) J. Biomol. NMR 4, 171-180.
31. Nilges, M., Clore, G. M. & Gronenborn, A. M. (1988) FEBS Lett. 229, 317-324.
32. Feng, S., Chen, J. K., Yu, H., Simon, J. A. & Schreiber, S. L. (1994) Science 266, 1241-1247.
33. Lim, W. A., Richards, F. M. & Fox, R. O. (1994) Nature (London) 372, 375-379.
34. Saraste, M. & Musacchio, A. (1994) Nat. Struct. Biol. 1, 835-837.
35. Viguera, A. R., Arrondo, J. L. R., Musacchio, A., Saraste, M. & Serrano, L. (1994) Biochemstry 33, 10925-10933.
36. Wittekind, M., Mapelli, C., Farmer, B. T. II, Suen, K.-L., Goldfarb, V., Tsao, J., Lavoie, T., Barbacid, M., Meyers, C. A. & Mueller, L. (1994) Biochemistry 33, 13531-13539.
37. Yu, H., Chen, J. K., Feng, S., Dalgarno, D. C., Brauer, A. W. & Schreiber, S. L. (1994) Cell 76, 933-945.
38. Shuker, S. B., Hajduk, P. J., Meadows, R. P. & Fesik, S. W. (1996) Science 274, 1531-1534.
39. Tao, X., Boyd, J. & Murphy, J. R. (1992) Proc. Natl. Acad. Sci. USA 89, 5897-5901.
40. Tao, X., Zeng, H. Y. & Murphy, J. R. (1995) Proc. Natl. Acad. Sci. USA 92, 6803-6807.
41. Wang, Z., Schmitt, M. P. & Holmes, R. K. (1994) Infect. Immun. 62, 1600-1608.
42. Tao, X. & Murphy, J. R. (1994) Proc. Natl. Acad. Sci. USA 91, 9646-9650.
43. Sicheri, F., Maorefi, I. & Kuriyan, J. (1997) Nature (London) 385, 602-609.
44. Xu, W., Harrison, S. C. & Eck, M. L. (1997) Nature (London) 385, 595-602.
45. Andreotti, A. H., Bunnell, S. C., Feng, S., Berg, L. J. & Screiber, S. L. (1997) Nature (London) 385, 93-97.
46. Pohl, E., Holmes, R. K. & Hol, W. G. J. (1999) J. Mol. Biol. 285, 1145-1156.
47. Johnson, P. E., Joshi, M. D., Tomme, P., Kilburn, D. G. & McIntosh, L. P. (1996) Biochemistry 35, 14381-14394.
48. Goranson-Siekierke, J., Pohl, E., Hol, W. G. J. & Holmes, R. K. (1999) Infect. Immun. 67, 1806-1811.
49. Pohl, E., Qiu, W., Must, L. M., Holmes, R. K. & Hol, W. G. J. (1997) Protein Sci. 6, 1114-1118.