Localization and characterization of nucleotide sequences from the canine Y chromosome

Chromosome Research

Volumn 7, Issue 3, 1999, Pages 223-233

  Olivier, Michael ^a,c   Breen, Matthew ^b   Binns, Matthew M ^b   Lust, George ^a  

^a Department of Population Medicine and Diagnostic Sciences   (United States)

^b ANIMAL HEALTH TRUST   (United Kingdom)

^c STANFORD UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

Dog; FISH; Microsatellite; Y chromosome

Indexed keywords

DNA FRAGMENT; MICROSATELLITE DNA;

ARTICLE; BACTERIOPHAGE LAMBDA; CENTROMERE; CLONE; CONTROLLED STUDY; COSMID; DNA SEQUENCE; DOG; FEMALE; FLUORESCENCE IN SITU HYBRIDIZATION; GENE LIBRARY; MALE; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; WOLF; Y CHROMOSOME;

ANIMALS; CARNIVORA; CHROMOSOME MAPPING; DOGS; FEMALE; FOXES; IN SITU HYBRIDIZATION, FLUORESCENCE; MALE; MICROSATELLITE REPEATS; POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS, DNA; SPECIES SPECIFICITY; WOLVES; Y CHROMOSOME;

BACTERIOPHAGE LAMBDA; CANIDAE; CANIS; CANIS FAMILIARIS;

EID: 0033000596     PISSN: 09673849     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1009203500926     Document Type: Article

References (42)

1. Botstein D, White RL, Skolnick M, Davis RW (1980) Construction of a genetic linkage map in man using restriction fragment length polymorphisms. Am J Hum Genet 32: 314-331.
2. Bray-Ward P, Menninger J, Lieman J et al. (1996) Integration of the cytogenetic, genetic, and physical maps of the human genome by FISH imaging of CEPH YAC clones. Genomics 32: 1-14.
3. Breen M, Lindgren G, Binns MM et al. (1997) Genetical and physical assignments of equine microsatellites - first integration of anchored markers in horse genome mapping. Mamm Genome 8: 267-273.
4. Carpio CM, Ambady S, Ponce de Leon FA (1996) Bovine DNA polymorphisms uncovered by RAPD-PCR. Anim Biotechnol 7: 125-134.
5. Cheng S (1995) Longer PCR amplifications. In: Innis MA, Gelfand DH, Sninsky JJ, eds. PCR Strategies. San Diego, CA, USA: Academic Press, pp. 313-324.
6. Cheng S, Fockler C, Higuchi R (1994) Efficient amplification of long targets from human genomic DNA and cloned inserts. Proc Natl Acad Sci USA 91: 5695-5699.
7. Cooper G, Amos W, Hoffman D, Rubinsztein DC (1996) Network analysis of human Y microsatellite haplotypes. Hum Mol Genet 5: 1759-1766.
8. Cushwa WT, Dodds KG, Crawford AM, Medrano JF (1996) Identification and genetic mapping of random amplified polymorphic DNA (RAPD) markers to the sheep genome. Mamm Genome 7: 580-585.
9. de Knijff P, Kayser M, Caglia A et al. (1997) Chromosome Y microsatellites: population genetic and evolutionary aspects. Int J Leg Med 110: 134-140.
10. Durnam DM, Anders KR, Fisher L, O'Quigley J, Bryant EM, Thomas ED (1989) Analysis of the origin of marrow cells in bone marrow transplant recipients using a Y-chromosome-specific in situ hybridization assay. Blood 74: 2220-2226.
11. Ellis N, Goodfellow PN (1989) The mammalian pseudoautosomal region. Trends Genet 5: 406-410.
12. Fischer PE, Holmes NG, Dickens HF, Thomas R, Binns MM, Nacheva EP (1996) The application of FISH techniques for physical mapping in the dog (Canis familiaris). Mamm Genome 7: 37-41.
13. Fletcher S, Darragh D, Fan Y, Grounds MD, Fisher CJ, Beilharz MW (1993) Specific cloning of DNA fragments unique to the dog Y chromosome. Genet Anal Tech Applications 10: 77-83.
14. Freije D, Helms C, Watson MS, Doniskeller H (1992) Identification of a second pseudoautosomal region near the Xq and Yq telomeres. Science 258: 1784-1787.
15. Glaser B, Grutzner F, Willmann U et al. (1998) Simian Y chromosomes: species-specific rearrangements of DAZ, RBM, and TSPY versus contiguity of PAR and SRY. Mamm Genome 9: 226-231.
16. Gomolka M, Hundrieser J, Nürnberg P, Roewer L, Epplen JT, Epplen C (1994) Selected di-and tetranucleotide microsatellites from chromosomes 7, 12, 14, and Y in various Eurasian populations. Hum Genet 93: 592-596.
17. Gutiérrez-Adán A, Cushwa WT, Anderson GB, Medrano JF (1997) Ovine-specific Y-chromosome RAPD-SCAR marker for embryo sexing. Anim Genet 28: 135-138.
18. Harley VR, Goodfellow PN (1994) The biochemical role of SRY in sex determination. Mol Reprod Dev 39: 184-193.
19. Hillyard AL, Davisson MT, Doolittle DP et al. (1993) Locus map of mouse. In: O'Brien SJ, ed. Genetic Maps. 6th Edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.
20. Holmes NG, Mellersh CS, Humphreys SJ et al. (1993) Isolation and characterization of microsatellites from the canine genome. Anim Genet 24: 289-292.
21. Kayser M, Caglia A, Corach D et al. (1997) Evaluation of Y-chromosomal STRs: a multicenter study. Int J Leg Med 110: 125-133.
22. Kovar DJ, Rickords LF (1996) Rapid detection of a bovine Y-chromosome specific repeat sequence using fluorescence in-situ hybridization (FISH). Theriogenology 45: 234.
23. Langford CF, Fischer PE, Binns MM, Holmes NG, Carter NP (1996) Chromosome-specific paints from a high-resolution flow karyotype of the dog. Chrom Res 4: 115-123.
24. Lingaas F, Sørensen A, Juneja RK et al. (1997) Towards construction of a canine linkage map: establishment of 16 linkage groups. Mamm Genome 8: 218-221.
25. Mellersh CS, Langston AA, Acland GA et al. (1997) A linkage map of the canine genome. Genomics 46: 326-336.
26. Meyers-Wallen VN, Palmer VL, Acland GM, Hershfield B (1995) Sry-negative XX sex reversal in the American Cocker Spaniel dog. Mol Reprod Dev 41: 300-305.
27. Olivier M, Lust G (1998) Two DNA sequences characteristic of the canine Y chromosome. Anim Genet 29: 146-149.
28. Ostrander EA, Mapa FA, Yee M, Rine J (1995) One hundred and one simple sequence repeat-based markers for the canine genome. Mamm Genome 6: 192-195.
29. Page DC, Bicker K, Brown LG et al. (1987) Linkage, physical mapping, and DNA sequence analysis of pseudoautosomal loci on the human X and Y chromosome. Genomics 1: 243-256.
30. Rappold GA (1993) The pseudoautosomal regions of the human sex chromosomes. Hum Genet 92: 315-324.
31. Ried T, Baldini A, Rand TC, Ward DC (1992) Simultaneous visualization of seven different DNA probes by in situ hybridization using combinatorial fluorescence and digital imaging microscopy. Proc Natl Acad Sci USA 89: 1388-1392.
32. Roewer L, Arnemann J, Spurr NK, Grzeschik KH, Epplen JT (1992) Simple repeat sequences on the human Y chromosome are equally polymorphic as their autosomal counterparts. Hum Genet 89: 389-394.
33. Roewer L, Kayser M, Dieltjes P et al. (1996) Analysis of molecular variance (AMOVA) of Y-chromosome-specific microsatellites in two closely related human populations. Hum Mol Genet 5: 1029-1033.
34. Sambrook J, Fritsch EF, Maniatis T (1989) Molecular Cloning: A Laboratory Manual, 2nd Edn. Cold Spring Harbor, NY, USA: Cold Spring Harbor Laboratory.
35. Switonski M, Reimann N, Bosma AA et al. (1996) Report on the progress of standardization of the G-banded canine (Canis familiaris) karyotype. Chrom Res 4: 306-309.
36. Teale AJ, Wambugu J, Gwalisa PS, Stranzinger G, Bradley D, Kemp SJ (1995) A polymorphism in randomly amplified DNA that differentiates the Y chromosomes of Bos indicus and Bos taurus. Anim Genet 26: 243-248.
37. Vilà C, Savolainen P, Maldonado JE et al. (1997) Multiple and ancient origins of the domestic dog. Science 276: 1687-1689.
38. Wagner JL, Burnett RC, DeRose SA, Francisco LV, Storb R, Ostrander EA (1996) Histocompatibility testing of dog families with highly polymorphic microsatellite markers. Transplantation 62: 876-877.
39. White DA, Sweeney MC (1993) Detection of male cells in mixtures containing varying proportions of male and female cells by fluorescence in situ hybridization and G-banding. Cytometry 14: 9-15.
40. Whitfield LS, Hawkins, TL, Goodfellow PN, Sulston J (1995) 41 kilobases of analysed sequence from the pseudoautosomal and sex-determining regions of the short arm of the human Y chromosome. Genomics 27: 306-311.
41. Williams JGK, Kubelik AR, Livak KJ, Rafalski JA, Tingey SV (1990) DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucl Acid Res 18: 6531-6535.
42. n polymorphisms to determine the origin of blood cells after allogeneic canine marrow grafting. Transplantation 58: 701-706.