Identification and genetic mapping of random amplified polymorphic DNA (RAPD) markers to the sheep genome

Mammalian Genome

Volumn 7, Issue 8, 1996, Pages 580-585

  Cushwa, W T ^a   Dodds, K G ^b   Crawford, A M ^c   Medrano, J F ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b INVERMAY AGRICULTURAL CENTRE   (New Zealand)

^c UNIVERSITY OF OTAGO   (New Zealand)

Author keywords

[No Author keywords available]

Indexed keywords

OVIS ARIES;

PRIMER DNA;

ANIMAL; ARTICLE; CHROMOSOME MAP; FEMALE; GENETIC MARKER; GENETIC POLYMORPHISM; GENETICS; GENOME; MALE; PEDIGREE; RANDOM AMPLIFIED POLYMORPHIC DNA; SHEEP;

ANIMALS; CHROMOSOME MAPPING; DNA PRIMERS; FEMALE; GENETIC MARKERS; GENOME; MALE; PEDIGREE; POLYMORPHISM, GENETIC; RANDOM AMPLIFIED POLYMORPHIC DNA TECHNIQUE; SHEEP;

EID: 0030213366     PISSN: 09388990     EISSN: None     Source Type: Journal    
DOI: 10.1007/s003359900173     Document Type: Article

References (30)

1. Antoniou, E., Urdaci, M., Skidmore, C. (1994). Isolation of bovine Y specific markers by RAPD. Proc. 5th World Congress Genet. Appl. Livestock Prod. 21, 117-119.
2. Archibald, A.L., Haley, C.S., Brown, J.F., Couperwhite, S., McQueen, H.A., et al. (1995). The PiGMaP consortium linkage map of the pig (Sus scrofa). Mamm. Genome 6, 157-175.
3. Arnau, J., Housego, A.P., Oliver, R.P. (1994). The use of RAPD markers in the genetic analysis of the plant pathogenic fungus Cladosporium fulvum. Curr. Genet. 25, 438-444.
4. Barendse, W., Armitage, S.M., Kossarek, L.M., Shalom, A., Kirkpatrick, B.W., Ryan, A.M., Clayton, D., Li, L., Neibergs, H.L., Zhang, N., Grosse, W.M., Weiss, J., Creighton, P., McCarthy, F., Ron, M., Teale, A.J., Fries, R., McGraw, R.A., Moore, S.S., Georges, M. Soller, M., Womack, J.E., Hetzel, D.J.S. (1994). A genetic linkage map of the bovine genome. Nature Genet. 6, 227-235.
5. Bishop, M.D., Kappes, S.M., Keele, J.W., Stone, R.T., Sunden, S.L.F., Hawkins, G.A., Toldo, S.S., Fries, R., Grosz, M.D., Yoo, J., Beattie, C.W. (1994). A genetic linkage map for cattle. Genetics 136, 619-639.
6. Botstein, D., White, R., Skolnick, M., Davis, R.W. (1980). Construction of a genetic linkage map in man using restriction fragment length polymorphisms. Am. J. Hum. Genet. 32, 314-331.
7. Burt, D.W., Albright, D.G., Williams, J.G.K., Ponce de Leon, F.A., Braun, M.J. (1995). Chicken genome mapping: a new era in avian genetics. Trends Genet. 11, 190-194.
8. Cheah, Y.-C., Nadeau, J.H., Pugh, S., Paigen, B. (1994). New murine polymorphisms detected by random amplified polymorphic DNA (RAPD) PCR and mapped by use of recombinant inbred strains. Mamm. Genome 5, 762-767.
9. Crawford, A.M., Montgomery, G.W., Pierson, C.A., Brown, T., Dodds, K.G., Sunden, S.L.F., Henry, H.M., Ede, A.J., Swarbrick, P.A., Berryman, T., Penty, J.M., Hill, D.F. (1994). Sheep linkage mapping: Nineteen linkage groups derived from analysis of paternal half-sib families. Genetics 137, 573-579.
10. Crawford, A.M., Dodds, K.G., Ede, A.J., Pierson, C.A., Montgomery, G.W., Garmonsway, H.G., Beattie, A.E., Davies, K., Maddox, J.F., Kappes, S.W., Stone, R.T., Nguyen, T.C., Penty, J.M., Lord, E.A., Broom, J.E., Buitkamp, J., Schwaiger, W., Epplen, J.T., Matthew, P., Matthews, M.E., Hulme, D.J., Beh, K.J., McGraw, R.A., Beattie, C.W. (1995). An autosomal genetic linkage map of the sheep genome. Genetics 140, 703-724.
11. Cushwa, W.T., Medrano, J.F. (1994). Identification of RAPD genetic markers in sheep. Proc. 5th World Congress Genet. Appl. Livestock Prod. 21, 133-136.
12. Cushwa, W.T., Medrano, J.F. (1996). Applications of the random amplified polymorphic DNA (RAPD) assay for genetic analysis of livestock species. Anim. Biotech. 7, 11-31.
13. Gwakisa, P.S., Kemp, S.J., Teale, A.J. (1994). Characterization of Zebu cattle breeds in Tanzania using random polymorphic DNA markers. Anim. Genet. 25, 89-94.
14. Hadrys, H., Balick, M., Schierwater, B. (1992). Applications of random amplified polymorphic DNA (RAPD) in molecular ecology. Mol. Ecol. 1, 55-63.
15. Kemp, S.J., Teale, A.J. (1994). Randomly primed PCR amplification of pooled DNA reveals polymorphism in a ruminant repetitive DNA sequence which differentiates Bos indicus and B. taurus. Anim. Genet. 25, 83-88.
16. Lander, E., Green, P. (1987). Construction of multi-locus genetic linkage maps in humans. Proc. Natl. Acad. Sci. USA 84, 2363-2367.
17. Levin, I., Crittenden, L.B., Dodgson, J.B. (1993). Genetic map of the chicken Z chromosome using random amplified polymorphic DNA (RAPD) markers. Genomics 16, 224-230.
18. Levin, I., Santangelo, L., Cheng, H., Crittenden, L.B., Dodgson, J.B. (1994). An autosomal genetic linkage map of the chicken. J. Hered. 85, 79-85.
19. Montgomery, G.W., Sise, J.A. (1990). Extraction of DNA from sheep white blood cells. N.Z. J. Agr. Res. 33, 437-441.
20. Nadeau, J., Bedigian, H., Bouchard, G., Denial, T., Kosowsky, M., Norberg, R., Pugh, S., Sargeant, E., Turner, R., Paigen, B. (1992). Multilocus markers for mouse genome analysis: PCR amplification based on single primers of arbitrary nucleotide sequence. Mamm. Genome 3, 55-64.
21. Ott, J. (1991). Analysis of Human Genetic Linkage, rev. ed. (Baltimore, London: The Johns Hopkins University Press).
22. Rohrer, G.A., Alexander, L.J., Keele, J.W., Smith, T.P., Beattie, C.W. (1994). A microsatellite linkage map of the porcine genome. Genetics 136, 231-245.
23. Serikawa, T., Montagutelli, X., Simon-Chazottes, D., Guénet, J. (1992). Polymorphisms revealed by PCR with single, short-sized, arbitrary primers are reliable markers for mouse and rat gene mapping. Mamm. Genome 3, 65-72.
24. Smith, J.J., Scott-Craig, J.S., Leadbetter, J.R., Bush, G.L., Roberts, D.L., Fulbright, D.W. (1994). Characterization of Random Amplified Polymorphic DNA (RAPD) products from Xanthomonas campestris and some comments on the use of RAPD products in phylogenetic analysis. Mol. Phylogenet. Evol. 3, 135-145.
25. Venugopal, G., Trivedi, H.N., Mohapatra, S.S. (1994). Arbitrary single short primers identify polymorphic DNA markers that distinguish inbred strains of mice. Biochem. Biophys. Res. Commun. 203, 659-665.
26. Wardell, B., Sudweeks, J., Meeker, N., Estes, S., Woodward, S., Teuscher, C. (1993). The identification of Y chromosome-linked markers with random sequence oligonucleotide primers. Mamm. Genome 4, 109-112.
27. Weber, J.L. (1990). Human DNA polymorphisms based on length variations in simple-sequence tandem repeats. In Genome Analysis Volume 1: Genetic and Physical Mapping, K.E. Davies, S.M. Tilghman, eds. (Cold Spring Harbor, N.Y.: Cold Spring Harbor Laboratory Press), pp. 159-181.
28. Wei, R., Dentine, M.R., Bitgood, J.J. (1994). Identification of RAPD markers in crosses between inbred lines of Rhode Island Red and White Leghorn. Proc. 5th World Congress Genet. Appl. Livestock Prod. 21, 41-44.
29. Williams, J., Kubelik, A., Livak, K., Rafalski, J.A., Tingey, S. (1990). DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res. 18, 6531-6535.
30. Woodward, S.R., Sudweeks, J., Teuscher, C. (1992). Random sequence oligonucleotide primers detect polymorphic DNA products that segregate in inbred strains of mice. Mamm. Genome 3, 73-78.