Genetical and physical assignments of equine microsatellites - First integration of anchored markers in horse genome mapping

Mammalian Genome

Volumn 8, Issue 4, 1997, Pages 267-273

  Breen, Matthew ^a,b   Lindgren, Gabriella ^c   Binns, Matthew M ^b   Norman, Julianne ^a   Irvin, Zlaka ^a   Bell, Kevin ^a   Sandberg, Kaj ^c   Ellegren, Hans ^c  

^a UNIVERSITY OF QUEENSLAND   (Australia)

^b ANIMAL HEALTH TRUST   (United Kingdom)

^c SWEDISH UNIVERSITY OF AGRICULTURAL SCIENCES   (Sweden)

Author keywords

[No Author keywords available]

Indexed keywords

MICROSATELLITE DNA;

ALLELE; ANIMAL; ARTICLE; CHROMOSOME BANDING PATTERN; CHROMOSOME MAP; FACTUAL DATABASE; FLUORESCENCE IN SITU HYBRIDIZATION; GENE LIBRARY; GENETIC LINKAGE; GENETICS; HORSE; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE;

ALLELES; ANIMALS; CHROMOSOME BANDING; CHROMOSOME MAPPING; DATABASES, FACTUAL; GENE LIBRARY; HORSES; IN SITU HYBRIDIZATION, FLUORESCENCE; LINKAGE (GENETICS); MICROSATELLITE REPEATS; MOLECULAR SEQUENCE DATA;

ANIMALIA; EQUIDAE; EQUUS CABALLUS; MAMMALIA;

EID: 0031109648     PISSN: 09388990     EISSN: None     Source Type: Journal    
DOI: 10.1007/s003359900407     Document Type: Article

References (38)

1. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215, 403-410
2. Andersson L, Juneja K, Sandberg K (1983) Gentic linkage between the loci for phosphohexose isomerase (PHI) and a serum protein (Xk) in horses. Anim Blood Groups Biochem Genet 14, 45-50.
3. Andersson L, Haley CS, Ellegren H, Knott SA, Johansson M, Andersson K, Andersson-Eklung L, Edfors-Lilja I, Fredholm M, Hansson I, Håkansson J, Lundström K (1994) Genetic mapping of quantitative trait loci for growth and fatness in pigs. Science 263, 1771-1774
4. Ansari HA, Hediger R, Fries R, Stanzinger G (1988) Chromosomal localisation of the major histocompatibility complex of the horse (ELA) by in situ hybridisation. Immunogenetics 28, 362-264
5. Bailey E, Graves KT, Cothran EG, Reid R, Lear TL, Ennis RB (1995) Synteny mapping horse microsatellite markers using a heterohybridoma panel. Anim Genet 26, 177-180
6. Bailey EC, Stormont C, Suzuki Y, Trommershausen-Smith A (1979) Linkage of loci controlling allogantigens on red blood cells and lymphocytes in the horse. Science 204, 1317-1319
7. Barendse W, Armitage SM, Kossarek LM, Shalom A, Kirkpatrick BW, Ryan AM, Clayton D, Li L, Neibergs HL, Zhang N, Grosse WM, Weiss J, Creighton P, McCarthy F, Ron M, Teale AJ, Fries R, McGraw RA, Moore SS, Georges M, Soller M, Womack JE, Hetzel DJS (1994) A genetic linkage map of the bovine genome. Nature Genet 6, 227-235
8. Breen M, Gill JJB (1991) The chromosomes of two horse x zebra hybrids, E. caballus x E. grevyi and E. burchelli. Hereditas 115, 169-175
9. Breen M, Arveiler B, Murray I, Gosden JR, Porteous DJ (1992) YAC mapping by FISH using Alu-PCR-generated probes. Genomics 13, 726-730
10. Breen M, Downs P, Irvin Z, Bell K (1994a) Six equine dinucleolide repeats: microsatellite MPZ002, 3, 4, 5, 6 and 7. Anim Genet 25, 124
11. Breen M, Downs P, Irvin Z, Bell K (1994b) Intragenetic amplification of horse microsatellite markers with emphasis on the Przewalski's horse (E. Przewalskii). Anim Genet, 25, 401-405
12. Burt DW, Bumstead N, Bitgood JJ, Ponce DeLeon FA, Crittenden LB (1995) Chicken genome mapping: a new era in avian genetics. Trends Gent 11, 190-194
13. Chowdhary BP, Harbitz I, Davies W, Gustavsson I (1992) Localisation of the calcium release channel in cattle and horse by in situ hybridisation: evidence of a conserved synteny with glucose phosphate isomerase. Anim Genet 23, 43-50
14. Crawford AM, Dodds KG, Ede AJ, Pierson CA, Montgomery GW, Garmonsway GH, Beattie AE, Davies K, Maddox JF, Kappes SW, Stone RT, Nguyen TC, Penty JM, Lord EA, Broom JE, Buitkamp J, Schwaiger W, Epplen JT, Matthew P, Matthews ME, Hulme DJ, Beh KJ, McGraw RA, Beattie CW (1995) An autosomal genetic linkage map of the sheep genome. Genetics 140, 703-724
15. Dietrich W, Katz H, Lincoln SE, Shin H-S, Friedman J, Dracopoli NC, Lander ES (1992) A genetic map of the mouse suitable for typing intraspecific crosses. Genetics 131, 423-447
16. Ellegren H, Johansson M, Sandberg K, Andersson L (1992) Cloning of highly polymorphic microsatellites in the horse. Anim Genet 23, 133-142
17. Ellegren H, Chowdhary BP, Johansson M, Marklung L, Fredholm M, Gustavsson I, Andersson L (1994) A primary linkage map of the procine genome reveals a low rate of genetic recombination. Genetics 137, 1089-1100
18. Ewen KR, Matthews ME (1994) VIAS-H17 and VIAS-H34: two new polymorphic equine microsatellite loci. Anim Genet 25, 63.
19. Georges M, Nielsen D, Mackinnon M, Mishra A, Okimoto R, Pasquino AT, Sargeant LS, Sorensen A, Steele MR, Zhao X (1995) Mapping quantitative trait loci controlling milk production in dairy cattle by exploiting progeny testing. Genetics 139, 907-920
20. Green P, Falls KA, Crooks S (1990) Documentation for CRI-MAP. version 2.4. (St Louis, Mo: Washington University School of Medicine).
21. Gu F, Harbitz I, Chowdhary BP, Chowdhary R, Gustavsson I (1992) Localisation of the 6-phosphogluconate dehydrogenase (PGD) gene in horses by in situ hybridisation. Hereditas 117, 93-95
22. Guérin G, Bertaud M, Amigues Y (1994) Characterization of seven new horse microsatellites: HMS1, HMS2, HMS3, HMS5, HMS6, HMS7 and HMS8. Anim Gent 25, 62
23. Harbitz I, Chowdhary BP, Saether H, Hauge JG, Gustavsson I (1990) A porcine genomic glucosephosphate isomerase probe detects a multiallelic restriction fragment length polymorphism assigned to chromosome 10pter in horse. Hereditas 112, 151-156
24. Makinen A, Chowdhary BP, Mahdy E, Andersson L, Gustavsson I (1989) Localisation of the equine major histocompatibility complex (ELA) to chromosome 20 by in situ hybridisation. Hereditas 110, 93-96
25. Marklund S, Ellegren H, Eriksson S, Sandberg K, Andersson L (1994) Parentage testing and linkage analysis in the horse using a set of highly polymorphic microsatellites. Anim Genet 25, 19-23
26. Millon LV, Bowling AT, Bickel LA (1993) Fluorescence in situ hybridization of C3 and 18S rDNA to horse chromosomes. Proceedings, 8th North American Colloquium on Domestic Animal Cytogenetics and Gene Mapping. Guelph, p 163
27. Montgomery GW, Crawford AM, Penty JM, Dodds KG, Ede AJ, Henry HM, Pierson CA, Lord EA, Galloway SM, Schmack AE, Sise JA, Swarbrick PA, Hanrahgan V, Buchanan FC, Hill DF (1993) The ovine Boorola fecundity gene (FecB) is linked to markers from a region of human chromosome 4q. Nature Genet 4, 410-414
28. Oakenfull EA, Buckle VJ, Clegg JB (1993) Localization of the horse (Equus caballus) α-globin gene complex to chromosome 13 by fluorescence in situ hybrisization. Cytogenet Cell Genet 62, 136-138
29. Rohrer GA, Alexander LJ, Keele JW, Smith TP, Beattie CW (1994) A microsatellite linkage map of the porcine genome. Genetics 136, 231-245
30. Sakagami M, Tozaki T, Mashima S, Hirota K, Mukoyama H (1995) Equine parentage testing by microsatellite locus at chromosome 1q2.1. Anim Genet 26, 123-124
31. Sandberg K (1974) Linkage between the K blood group locus and the 6-PGD locus in horses. Anim Blood Groups Biochem Genet 5, 137-141
32. Sandberg K, Andersson L (1992) Horse (Equus, caballus). In Genetic Maps 6th ed. (ed. SJ O'Brien, ed.) (Cold Spring Harbor, N.Y.: Cold Spring Harbor Laboratory Press), pp 4.276-8
33. Sandberg K, Juneja K (1978) Close linkage between the albumin and Gc loci in the horse. Anim Blood Groups Biochem Genet 9, 169-173
34. Tozaki T, Sakagami M, Mashima S, Hirota K, Mukoyama H (1995) ECA-3: equine (CA) repeat polymorphism at chromosome 2p1.3-4. Anim Genet 26, 282
35. Trommershausen-Smith A (1978) Linkage of tobiano coat spotting and albumin markers in a pony family. J Hered 69, 214-216
36. van Haeringen H, Bowling AT, Stott ML, Lenstra JA, Zwaagstra KA (1994) A highly polymorphic horse microsatellite locus VHL20. Anim Genet 25, 207
37. n polymorphisms. Genomics 7, 524-530
38. Weissenbach J, Gyapay G, Dib C, Vignal A, Morissette J, Millasseau P, Vaysseix G, Lathrop M (1992) A second-generation linkage map of the human genome. Nature 359, 794-801