Coordination of tRNA nuclear export with processing of tRNA

RNA

Volumn 5, Issue 4, 1999, Pages 539-549

  Lipowsky, Gerd ^a   Bischoff, F Ralf ^b   Izaurralde, Elisa ^c   Kutay, Ulrike ^a   Schäfer, Stefan ^d   Gross, Hans J ^d   Beier, Hildburg ^d   Görlich, Dirk ^a  

^a UNIVERSITY OF HEIDELBERG   (Germany)

^b GERMAN CANCER RESEARCH CENTER DKFZ   (Germany)

^c UNIVERSITY OF GENEVA   (Switzerland)

^d UNIVERSITY OF WÜRZBURG   (Germany)

Author keywords

Exportin t; Nuclear pore complex; Nuclear transport; tRNA; tRNA maturation

Indexed keywords

TRANSFER RNA;

ANIMAL CELL; ARTICLE; CELL NUCLEUS; CELL NUCLEUS TRANSPLANTATION; EUKARYOTE; NONHUMAN; OOCYTE; PRIORITY JOURNAL; PROKARYOTE; RNA PROCESSING; RNA SPLICING; RNA SYNTHESIS; RNA TRANSLATION; XENOPUS;

ANIMALIA; EUKARYOTA; PROKARYOTA;

EID: 0032899187     PISSN: 13558382     EISSN: None     Source Type: Journal    
DOI: 10.1017/S1355838299982134     Document Type: Article

References (48)

1. Abelson J, Trotta CR, Li H. 1998. tRNA splicing. J Biol Chem 273:12685-12688.
2. Akama K, Nass A, Junker V, Beier H. 1997. Characterization of nuclear tRNA(Tyr) introns: Their evolution from red algae to higher plants. FEBS Lett 417:213-218.
3. Arts GJ, Fornerod M, Mattaj IW. 1998a. Identification of a nuclear export receptor for tRNA. Curr Biol 8:305-314.
4. Arts GJ, Kuersten S, Romby P, Ehresmann B, Mattaj IW. 1998b. The role of exportin-t in selective nuclear export of mature tRNA. EMBO J 17:7430-7441.
5. Belfort M, Weiner A. 1997. Another bridge between kingdoms: tRNA splicing in archaea and eukaryotes. Cell 89:1003-1006.
6. Bertrand E, Houser-Scott F, Kendall A, Singer RH, Engelke DR. 1998. Nucleolar localization of early tRNA processing. Genes & Dev 12:2463-2468.
7. Bischoff FR, Krebber H, Smirnova E, Dong WH, Ponstingl H. 1995. Coactivation of RanGTPase and inhibition of GTP dissociation by Ran GTP binding protein RanBP1. EMBO J 14:705-715.
8. Björk GR. 1995. Biosynthesis and function of modified nucleosides. In: Söll D, RajBhandary UL, eds. tRNA: Structure, biosynthesis, and function. Washington, DC: ASM Press. pp 165-206.
9. Boelens WC, Palacios I, Mattaj IW. 1995. Nuclear retention of RNA as a mechanism for localization. RNA 1:273-283.
10. Dahlberg JE, Lund E. 1998. Functions of the GTPase Ran in RNA export from the nucleus. Curr Opin Cell Biol 10:400-408.
11. De Robertis EM, Black P, Nishikura K. 1981. Intranuclear location of the tRNA splicing enzymes. Cell 23:89-93.
12. Deutscher MP. 1995. tRNA processing nucleases. In: Söll D, RajBhandary UL, eds. tRNA: Structure, biosynthesis, and function. Washington, DC: ASM Press. pp 51-66.
13. Dirheimer G, Keith G, Dumas P, Westhof E. 1995. Primary, secondary, and tertiary structures of tRNA. In: Söll D, RajBhandary UL, eds. tRNA: Structure, biosynthesis, and function. Washington, DC: ASM Press. pp 93-126.
14. Floer M, Blobel G. 1996. The nuclear transport factor karyopherin β binds stoichiometrically to Ran-GTP and inhibits the Ran GTPase activating protein. J Biol Chem 271:5313-5316.
15. Fornerod M, Ohno M, Yoshida M, Mattaj IW. 1997. Crm1 is an export receptor for leucine-rich nuclear export signals. Cell 90:1051-1060.
16. Görlich D, Panté N, Kutay U, Aebi U, Bischoff FR. 1996. Identification of different roles for RanGDP and RanGTP in nuclear protein import. EMBO J 15:5584-5594.
17. Hellmuth K, Lau DM, Bischoff FR, Kunzler M, Hurt E, Simos G. 1998. Yeast los1p has properties of an exportin-like nucleocytoplasmic transport factor for tRNA. Mol Cell Biol 18:6374-6386.
18. Hopper AK, Schultz LD, Shapiro RA. 1980. Processing of intervening sequences: A new yeast mutant which fails to excise intervening sequences from precursor tRNAs. Cell 19:741-751.
19. Hurt DJ, Wang SS, Lin YH, Hopper AK. 1987. Cloning and characterization of LOS1, a Saccharomyces cerevisiae gene that affects tRNA splicing. Mol Cell Biol 7:1208-1216.
20. Izaurralde E, Adam SA. 1998. Transport of macromolecules between the nucleus and the cytoplasm. RNA 4:351-364.
21. Izaurralde E, Kutay U, von Kobbe C, Mattaj IW, Görlich D. 1997. The asymmetric distribution of the constituents of the Ran system is essential for transport into and out of the nucleus. EMBO J 16:6535-6547.
22. Jarmolowski A, Boelens WC, Izaurralde E, Mattaj IW. 1994. Nuclear export of different classes of RNA is mediated by specific factors. J Cell Biol 124:627-635.
23. Kutay U, Bischoff FR, Kostka S, Kraft R, Görlich D. 1997. Export of importin alpha from the nucleus is mediated by a specific nuclear transport factor. Cell 90:1061-1071.
24. Kutay U, Lipowsky G, Izaurralde E, Bischoff FR, Schwarzmaier P, Hartmann E, Görlich D. 1998. Identification of a tRNA-specific nuclear export receptor. Mol Cell 1:359-369.
25. Lee CP, RajBhandary UL. 1991. Mutants of Escherichia coli initiator tRNA that suppress amber codons in Saccharomyces cerevisiae that are aminoacylated with tyrosine by yeast extracts. Proc Natl Acad Sci USA 88:11378-11382.
26. Lee MC, Knapp G. 1985. Transfer RNA splicing in Saccharomyces cerevisiae. Secondary and tertiary structures of the substrates. J Biol Chem 260:3108-3115.
27. Lund E, Dahlberg JE. 1998. Proofreading and aminoacylation of tRNAs before export from the nucleus. Science 282:2082-2085.
28. Mattaj IW, Englmeier L. 1998. Nucleocytoplasmic transport: The soluble phase. Ann Rev Biochem 67:265-306.
29. Melton DA, De Robertis EM, Cortese R. 1980. Order and intracellular location of the events involved in the maturation of a spliced tRNA. Nature 284:143-148.
30. Nishikura K, De Robertis EM. 1981. RNA processing in microinjected Xenopus oocytes. Sequential addition of base modifications in the spliced transfer RNA. J Mol Biol 145:405-420.
31. Pederson T. 1998. The plurifunctional nucleolus. Nucleic Acids Res 26:3871-3876.
32. Quinn CL, Tao N, Schimmel P. 1995. Species-specific microhelix aminoacylation by a eukaryotic pathogen tRNA synthetase dependent on a single base pair. Biochemistry 34:12489-12495.
33. Raba M, Limburg K, Burghagen M, Katze JR, Simsek M, Heckman JE, Rajbhandary UL, Gross HJ. 1979. Nucleotide sequence of three isoaccepting lysine tRNAs from rabbit liver and SV40-transformed mouse fibroblasts. Eur J Biochem 97:305-318.
34. Sarkar S, Hopper AK. 1998. tRNA nuclear export in Saccharomyces cerevisiae: In situ hybridization analysis. Mol Biol Cell 9:3041-3055.
35. Schäfer S, Heumann H, Gross HJ. 1997. Mammalian tRNA(Lys)3 and pre-tRNA(Lys)3 variants as primers and inhibitors of viral cDNA synthesis by HIV reverse transcriptase in vitro. Nucleic Acids Symp Ser 291-292.
36. Simos G, Tekotte H, Grosjean H, Segref A, Sharma K, Tollervey D, Hurt EC. 1996. Nuclear pore proteins are involved in the biogenesis of functional tRNA. EMBO J 15:2270-2284.
37. Sprague KU. 1995. Transcription of eukaryotic tRNA genes. In: Söll D, RajBhandary UL, eds. tRNA: Structure, biosynthesis, and function. Washington, DC: ASM Press. pp 31-50.
38. Sprinzl M, Hartmann T, Weber J, Blank J, Zeidler R. 1989. Compilation of tRNA sequences and sequences of tRNA genes. Nucleic Acids Res 17 (Suppl):1-172.
39. Stade K, Ford CS, Guthrie C, Weis K. 1997. Exportin 1 (Crm1p) is an essential nuclear export factor. Cell 90:1041-1050.
40. Stange N, Beier H. 1987. A cell-free plant extract for accurate pre-tRNA processing, splicing and modification. EMBO J 6:2811-2818.
41. Swerdlow H, Guthrie C. 1984. Structure of intron-containing tRNA precursors: Analysis of solution conformation using chemical and enzymatic probes. J Biol Chem 259:5197-5207.
42. j by point mutagenesis. Cell 43:415-422.
43. Weber U, Beier H, Gross HJ. 1996. Another heritage from the RNA world: Self-excision of intron sequence from nuclear pre-tRNAs. Nucleic Acids Res 24:2212-2219.
44. Westaway SK, Abelson J. 1995. Splicing of tRNA precursors. In: Söll D, RajBhandary UL, eds. tRNA: Structure, biosynthesis, and function. Washington, DC: ASM Press. pp 79-92.
45. Zasloff M. 1983. tRNA transport from the nucleus in a eukaryotic cell: Carrier-mediated translocation process. Proc Natl Acad Sci USA 80:6436-6440.
46. j. Nature 300:81-84.
47. Zasloff M, Santos T, Hamer DH. 1982b. tRNA precursor transcribed from a mutant human gene inserted into a SV40 vector is processed incorrectly. Nature 295:533-535.
48. Zerfass K, Beier H. 1992. Pseudouridine in the anticodon GψA of plant cytoplasmic tRNA(Tyr) is required for UAG and UAA suppression in the TMV-specific context. Nucleic Acids Res 20:5911-5918.