13C spin relaxation measurements in RNA: Sensitivity and resolution improvement using spin-state selective correlation experiments

Journal of Biomolecular NMR

Volumn 14, Issue 3, 1999, Pages 241-252

  Boisbouvier, Jérôme ^a   Brutscher, Bernhard ^a   Simorre, Jean Pierre ^a   Marion, Dominique ^a  

^a INSTITUT DE BIOLOGIE STRUCTURALE   (France)

Author keywords

13C relaxation; Conformational exchange; Cross correlation; CSA; Nucleic acids; TROSY

Indexed keywords

NUCLEIC ACID; NUCLEIC ACID BASE; RNA; THEOPHYLLINE DERIVATIVE;

ANISOTROPY; ARTICLE; CONFORMATIONAL TRANSITION; CORRELATION FUNCTION; PRIORITY JOURNAL; PROTON NUCLEAR MAGNETIC RESONANCE; RNA CONFORMATION; SPECTRAL SENSITIVITY; SPECTROMETRY;

EID: 0032842695     PISSN: 09252738     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1008365712799     Document Type: Article

References (47)

1. Akke, M. and Palmer III, A.G. (1996) J. Am. Chem. Soc., 118, 911-912.
2. Akke, M., Fiala, R., Jiang, F., Patel, D. and Palmer III, A.G. (1997) RNA, 3, 702-709.
3. Allen, F.H., Kennard, O., Watson, D.G., Brammer, L., Orpen, A.G. and Taylor, R. (1987) J. Chem. Soc. Perkin. Trans. II, S1-S19.
4. Andersson, P., Annila, A. and Otting, G. (1998) J. Magn. Reson., 133, 364-367.
5. Bloom, M., Reeves, L.W. and Wells, E.J. (1965) J. Chem. Phys., 42, 1615-1624.
6. Borer, P.N., LaPlante, S.R., Kumar, A., Zanatta, N., Martin, A., Hakkinen, A. and Levy, G.C. (1994) Biochemistry, 33, 2441-2450.
7. Brutscher, B., Brüschweiler, R. and Ernst, R.R. (1997) Biochemistry, 36, 13043-13053.
8. Brutscher, B., Boisbouvier, J., Pardi, A., Marion, D. and Simorre, J.-P. (1998) J. Am. Chem. Soc., 120, 11845-11851.
9. Gate, J.H., Gooding, A.R., Podell, E., Zhou, K., Golden, B.L., Kundrot, C.E., Cech, T.R. and Doudna, J.A. (1996) Science, 273, 1678-1685.
10. Cavanagh, J., Fairbrother, W.J., Palmer III, A.G. and Skelton, N.J. (1996) Protein NMR Spectroscopy, Academic Press Inc., San Diego, CA.
11. Cordier, F., Dingley, A.J. and Grzesiek, S. (1999) J. Biomol. NMR, 13, 175-180.
12. Deverell, C., Morgan, R.E. and Strange, J.H. (1970) Mol. Phys., 4, 553-559.
13. Dietrich, W., Rüdel, C.H. and Neumann, M. (1991) J. Magn. Reson., 91, 1-11.
14. Fushman, D. and Cowburn, D. (1998) J. Am. Chem. Soc., 120, 7109-7110.
15. Fushman, D., Tjandra, N. and Cowburn, D. (1998) J. Am. Chem. Soc., 120, 10947-10952.
16. Goldman, M. (1984) J. Magn. Reson., 60, 437-452.
17. Ishima, R., Wingfield, P.T., Stahl, S.J., Kaufman, J.D. and Torchia, D.A. (1998) J. Am. Chem. Soc., 120, 10534-10542.
18. Jenison, R.D., Gill, S.C., Pardi, A. and Polisky, B. (1994) Science, 263, 1425-1429.
19. Kay, L.E., Torchia, D.A. and Bax, A. (1989) Biochemistry, 28, 8972-8979.
20. Kay, L.E., Nicholson, L.K., Delaglio, F., Bax, A. and Torchia, D.A. (1992) J. Magn. Reson., 97, 359-375.
21. Kojima, C., Ono, A., Kainosho, M. and James, T.L. (1998) J. Magn. Reson., 135, 310-333.
22. Kroenke, C.D., Loria, J.P., Lee, L.K., Rance, M. and Palmer III, A.G. (1998) J. Am. Chem. Soc., 120, 7905-7915.
23. Legault, P. and Pardi, A. (1994) J. Magn. Reson., B103, 82-86.
24. Legault, P., Li, J., Mogridge, J., Kay, L.E. and Greenblatt, J. (1998) Cell, 93, 289-299.
25. Liu, H., Tonelli, M. and James, T. L. (1996) J. Magn. Reson., B111, 85-89.
26. Loria, J.P., Rance, M. and Palmer III, A.G. (1999) J. Am. Chem. Soc., 121, 2331-2332.
27. Meiboom, S. and Gill, D. (1958) Rev. Sci. Instrum., 29, 688-691.
28. Meissner, A., Duus, J.Ø. and Sørensen, O.W. (1997) J. Magn. Reson., 128, 92-97.
29. Ottiger, M., Delaglio, F. and Bax, A. (1998) J. Magn. Reson., 131, 373-378.
30. Palmer III, A.G., Cavanagh, J., Wright, P. and Rance, M. (1991) J. Magn. Reson., 93, 151-170.
31. Paquet, F., Gaudin, F. and Lancelot, G. (1996) J. Biomol NMR, 8, 252-260.
32. Peng, J.W. and Wagner, G. (1995) Biochemistry, 34, 16733-16752.
33. Pervushin, K., Riek, R., Wider, G. and Wüthrich, K. (1997) Proc. Natl. Acad. Sci. USA, 94, 12366-12371.
34. Pervushin, K., Wider, G. and Wüthrich, K. (1998a) J. Biomol. NMR, 12, 345-348.
35. Pervushin, K., Riek, R., Wider, G. and Wüthrich, K. (1998b) J. Am. Chem. Soc., 120, 6394-6400.
36. Phan, I.Q.H., Boyd, J. and Campbell, I.D. (1996) J. Biomol. NMR, 8, 369-378.
37. Rance, M., Loria, J.P. and Palmer III, A.G. (1999) J. Magn. Reson., 136, 92-101.
38. Shaka, A.J., Freeman, R. and Barker, P.B. (1985) J. Magn. Reson., 64, 547-552.
39. Sitkoff, D. and Case, D. (1998) Prog. NMR Spectr., 32, 165-190.
40. Spielmann, H.P. (1998) Biochemistry, 37, 16863-16876.
41. Veeman, W. (1984) Prog. NMR Spectrosc., 16, 193-235.
42. Wand, A.J., Bieber, R.J., Urbauer, J.L., McEvoy, R.P. and Gan, Z. (1995) J. Magn. Reson., B108, 173-175.
43. Wang, A.C., Kim, S.G., Flynn, P., Chou, S.H., Orban, J. and Reid, B. (1992) Biochemistry, 31, 3940-3946.
44. Williamson, J.R. and Boxer, S.G. (1989) Biochemistry, 28, 2819-2831.
45. Yamazaki, T., Muhandiram, R. and Kay, L.E. (1994) J. Am. Chem. Soc., 116, 8266-8278.
46. Zimmermann, G.R., Jenison, R.D., Wick, C.L., Simorre, J.-P. and Pardi, A. (1997) Nat. Struct. Biol., 4, 644-649.
47. Zimmermann, G.R., Shields, T.P., Jenison, R.D., Wick, C.L. and Pardi, A. (1998) Biochemistry, 37, 9186-9192.