Immune-associated nucleotide-1 (IAN-1) is a thymic selection marker and defines a novel gene family conserved in plants

Journal of Immunology

Volumn 163, Issue 9, 1999, Pages 4960-4969

  Poirier, Ghislaine M C ^a   Anderson, Graham ^a   Huvar, Arne ^b   Wagaman, Pamela C ^b   Shuttleworth, John ^a   Jenkinson, Eric ^a   Jackson, Michael R ^b   Peterson, Per A ^b   Erlander, Mark G ^b  

^a UNIVERSITY OF BIRMINGHAM   (United Kingdom)

^b J/J Pharmaceut Res/Development   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

NUCLEOTIDE DERIVATIVE;

AMINO ACID SEQUENCE; ANIMAL CELL; ARTICLE; CELL MATURATION; CONTROLLED STUDY; EMBRYO; EXPRESSED SEQUENCE TAG; GENE EXPRESSION; GENE ISOLATION; GENETIC CONSERVATION; GENETIC SELECTION; MARKER GENE; MOUSE; MULTIGENE FAMILY; NONHUMAN; NUCLEOTIDE SEQUENCE; PLANT; PRIORITY JOURNAL; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; T LYMPHOCYTE; THYMOCYTE;

AMINO ACID SEQUENCE; ANIMALS; ANTIGENS, CD3; BASE SEQUENCE; BIOLOGICAL MARKERS; CELL DIFFERENTIATION; CLONING, MOLECULAR; CONSERVED SEQUENCE; DNA, COMPLEMENTARY; GENES, PLANT; GTP-BINDING PROTEINS; LYMPHOCYTES; MICE; MICE, INBRED BALB C; MICE, INBRED C57BL; MICE, KNOCKOUT; MICE, TRANSGENIC; MOLECULAR SEQUENCE DATA; MULTIGENE FAMILY; ORGAN CULTURE TECHNIQUES; ORGAN SPECIFICITY; PLANT PROTEINS; RNA, MESSENGER; SEQUENCE HOMOLOGY, AMINO ACID; SIGNAL TRANSDUCTION; THYMUS GLAND;

EID: 0032737344     PISSN: 00221767     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (50)

1. - triple-negative adult mouse thymocytes defined by CD44 and CD25 expression. J. Immunol. 150:4244.
2. Fehling, H. J., and H. von Boehmer. 1997. Early αβ T cell development in the thymus of normal and genetically altered mice. Curr. Opin. Immunol. 9:263.
3. Kisielov, P., and H. von Boehmer. 1995. Development and selection of T cells: facts and puzzles. Adv. Immunol. 58:87.
4. Mallick, C. A., E. C. Dudley, J. L. Viney, M. J. Owen, and A. C. Hayday. 1993. Rearrangement and diversity of T cell receptor βchain genes in thymocytes: a critical role for the β chain in development. Cell 73:513.
5. +) thymocytes in normal and genetically modified mice. J. Immunol. 154:5103.
6. Ohashi, P. 1996. T cell selection and autoimmunity: flexibility and tuning. Curr. Opin. Immunol. 8:808.
7. + T cells in transgenic mice expressing a class II MHC-restricted antigen receptor. Nature 341:746.
8. Kisielov, P., H. S. Teh, H. Blüthmann, and H. Von Boehmer. 1988. Positive selection of antigen-specific T cells in thymus by restricting MHC molecules. Nature 335:730.
9. Fowlkes, B. J., and E. Schweighoffer. 1995. Positive selection of T cells. Curr. Opin. Immunol. 7:188.
10. Bendelac, A., P. Matzinger, R. A. Seder, W. E. Paul, and R. H. Schwartz. 1992. Activation events during thymic selection. J. Exp. Med. 175:731.
11. Huesmann, M., B. Scott, P. Kisielow, and H. von Boehmer. 1991. Kinetics and efficacy of positive selection in the thymus of normal and T cell receptor transgenic mice. Cell 66:533.
12. 1 defines a unique stage of human thymocytes development. J. Exp. Med. 179: 1573.
13. Liang, P., and A. B. Pardee. 1992. Differential display of eukaryotic messenger RNA by means of the polymerase chain reaction. Science 257:967.
14. Sha, W. C., C. A. Nelson, R. D. Newberry, D. M. Kranz, J. H. Russell, and D. Y. Loh. 1988. Selective expression of an antigen receptor on CD8-bearing T lymphocytes in transgenic mice. Nature 335:271.
15. + cytolytic cells. Nature 344: 742.
16. Bhat, N. K., K. L. Komschlies, S. Fujiwara, R. J. Fisher, B. J. Mathieson, T. A. Gregorio, H. A. Young, J. W. Kasik, K. Ozato, and T. Papas. 1989. Expression of ets genes in mouse thymocytes subsets and T cells. J. Immunol. 142:672.
17. Ebnet, K., C. N. Levelt, T. T. Tran, K. Eichmann, and M. M. Simon. 1995. Transcription of granzyme A and B genes is differentially regulated during lymphoid ontogeny. J. Exp. Med. 181:755.
18. Fisicaro, N., M. Katerelos, J. Williams, D. Power, A. D'Apice, and M. Pearse. 1995. Identification of genes down-regulated in the thymus by cyclosposrin-A: preliminary characterization of clone CSA-19. Mol. Immunol. 32:556.
19. Philpott, K. L., J. L. Viney, G. Kay, S. Rastan, E. M. Gardiner, S. Chae, A. C. Hayday, and M. J. Owen. 1992. Lymphoid development in mice congenitally lacking T cell receptor αβ-expressing cells. Science 256:1448.
20. Mombaerts, P., J. Iacomim, R. S. Johnson, K. Herrup, S. Tonegawa, and V. E. Papaioannou. 1992. Rag-1 deficient mice have no mature B and T lymphocytes. Cell 68:869.
21. Anderson, K. L., G. Anderson, R. H. Michell, E. J. Jenkinson, and J. J. T. Owen. 1996. Intracellular signaling pathways involved in the induction of apoptosis in immature thymic T lymphocytes. J. Immunol. 156:4083.
22. Galindo, J. E., G. M.-C. Poirier, H. Guo, A. Huvar, P. C. Wagaman, J. Zhu, J. Tench, J. S. Wan, and M. G. Erlander. 1998. Differential display of RNA. In DNA Markers: Protocols, Applications and Overviews. G. Anolles-Caetano, and P. Gresshoff, eds. John Wiley & Sons, New York, pp. 225-236.
23. Poirier, G. M., J. Pyati, J. S. Wan, and M. G. Erlander. 1997. Screening differentially expressed cDNA clones obtained by differential display using amplified RNA. Nucleic Acids Res. 25:913.
24. Simmons, D. M., J. L. Arriza, and L. W. Swanson. 1989. A complete protocol for in situ hybridization of messenger RNAs in brain and other tissues with radio-labeled single-stranded RNA probes. J. Histotechnol. 12:169.
25. Lupas, A., M. van Dyke, and J. Stock. 1991. Predicting coiled coils from protein sequences. Science 252:1162.
26. Berger, B., D. B. Wilson, E. Wolf, T. Tonchev, M. Milla, and P. S. Kim. 1995. Predicting coiled coils by use of pairwise residue correlations. Proc. Natl. Acad. Sci. USA 92:8259.
27. Wolf, W., P. S. Kim, and B. Berger. 1997. Multicoil: a program for predicting two-and three-stranded coiled coils. Protein Sci. 6:1179.
28. Nakai, K., and M. Kanehisa. 1992. A knowledge base for predicting protein localization sites in eukaryotic cells. Genomics 14:897.
29. Altschul, S. F., W. Gish, W. Miller, E. W. Myers, and D. J. Lipman. 1990. Basic local alignment search tool. J. Mol. Biol. 215:403.
30. Reuber, T. L., and F. M. Ausubel. 1996. Isolation of Arabidopsis genes that differentiate between resistance responses mediated by the RPS2 and RPM1 disease resistance genes. Plant Cell 8:241.
31. Krücken, J., H.-P. Schmitt-Wrede, U. Markmann-Mulish, and F. Wunderlich. 1997. Novel gene expressed in spleen cells mediating acquired testosterone-resistant immunity to Plasmodium chabaudi malaria. Biochem. Biophys. Res. Comman. 230:167.
32. Altschul, S. F., T. L. Madden, A. A. Schaffer, J. Zhang, Z. Zhang, W. Miller, and D. J. Lipman. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25:3389.
33. Nicholas, K. B., H. B. Nicholas, and D. W. I. Deerfield. 1997. GeneDoc: analysis and visualization of genetic variation. EMBNET. News 4:1.
34. Ahnn, J., P. E. March, H. E. Takiff, and M. Inouye. 1986. A GTP-binding protein of Escherichia coli has homology to yeast Ras proteins. Proc. Natl. Acad. Sci. USA 83:8849.
35. Kessler, F. B., G. Blobel, H. A. Patel, and D. J. Schnell. 1994. Identification of two GTP-binding proteins in the chloroplast protein import machinery. Science 266:1035.
36. Seedorf, M., K. Waegemann, and J. Soll 1995. A constituent of the chloroplast import complex represents a new type of GTP-binding protein. Plant J. 7:401.
37. Bourne, H. R., D. A. Sanders, and F. McCormick. 1991. The GTPase superfamily: conserved structure and molecular mechanism. Nature 349:117.
38. Levelt, C. N., P. Mombaerts, A. Iglesias, S. Tonegawa, and K. Eichmann. 1993. Restoration of early thymocyte differentiation in T-cell receptor ß-chain-deficient mutant mice by transmembrane signaling through CD3∈. Proc. Natl. Acad. Sci. USA 90:11401.
39. Traut, T. W. 1994. The functions and consensus motifs of nine types of peptide segments that form different type of nucleotides-binding sites. Eur. J. Biochem. 222:9.
40. Sander, C., and A. Valencia. 1995. Three-dimensional structure of ras and ras-related proteins. In Guidebook to the Small GTPases. L. Zerial, and L. A. Huber, eds. Oxford University Press, Oxford, p. 29.
41. Cheng, Y. S., C. E. Patterson, and P. Staeheli. 1991. Interferon-induced guanylate-binding proteins lack an N(T)KXD consensus motif and bind GMP in addition to GDP and GTP. Mol. Cell. Biol. 11:4717.
42. -/- mice in the absence of TCR βchain expression. Int. Immunol. 6:995.
43. Jacobs, H., D. Vandeputte, L. Tolkamp, E. de Vries, J. Borst, and A. Berns. 1994. CD3 components at the surface of pro-T cells can mediate pre-T cell development in vivo. Eur. J. Immunol. 24:934.
44. -/--immature thymocytes. Int. Immunol. 8:1159.
45. Kirberg, J., A. Berns, and H. von Boehmer. 1997. Peripheral T cell survival requires continual ligation of the T cell receptor to major histocompatibility complex-encoded molecules. J. Exp. Med. 186:1269.
46. Cory, S. 1995. Regulation of lymphocyte survival by the BCL-2 gene family. Annu. Rev. Immunol. 13:513.
47. Staskawicz, B. J., F. M. Ausubel, B. J. Baker, J. G. Ellis, and J. G. Jones. 1995. Molecular genetics of plant disease resistance. Science 268:661.
48. Mindrinos, M., F. Katagiri, G.-L. Yu, and F. M. Ausubel. 1994. The A. thaliana disease resistance gene RPS2 encodes a protein containing a nucleotide-binding site and leucine-rich repeats. Cell 78:1089.
49. van der Biezen, E. A., and J. D. G. Jones. 1998. The NB-ARC domain: a novel signaling motif shared by plant resistance gene products and regulators of cell death in animals. Curr. Biol. 8:R226.
50. L interacts with Apaf-1 and inhibits Apaf-1-dependent caspase-9 activation. Proc. Natl. Acad. Sci. USA 95:4386.