The solution structure of a locked nucleic acid (lna) hybridized to dna

Journal of Biomolecular Structure and Dynamics

Volumn 17, Issue 2, 1999, Pages 175-191

  Nielsen, Christina B ^a   Singh, Sanjay K ^b   Wengel, Jesper ^b   Jacobsen, Jens Peter ^a  

^a UNIVERSITY OF SOUTHERN DENMARK   (Denmark)

^b UNIVERSITY OF COPENHAGEN   (Denmark)

Author keywords

[No Author keywords available]

Indexed keywords

DNA HYBRID; NUCLEIC ACID;

ARTICLE; CONFORMATIONAL TRANSITION; DNA HELIX; DNA HYBRIDIZATION; MOLECULAR DYNAMICS; NUCLEIC ACID STRUCTURE; PRIORITY JOURNAL; PROTON NUCLEAR MAGNETIC RESONANCE; STRUCTURE ANALYSIS;

EID: 0032713003     PISSN: 07391102     EISSN: 15380254     Source Type: Journal    
DOI: 10.1080/07391102.1999.10508352     Document Type: Article

References (46)

1. Hélène, C., and Toulmé, J.-J., 1990. Biochem. Biophys. Acta., 1049:99–125.
2. Uhlmann, E., and Peyman, A., 1990. Chem. Rev., 90:543–584.
3. Koshkin, A. A., Singh, S. K., Nielsen, P., Rajwanshi, V. K., Kumar, R., Meldgaard, M., Olsen, C. E., and Wengel, J., 1998. Tetrahedron, 54:3607–3630.
4. Singh, S. K., Nielsen, P., Koshkin, A. A., and Wengel, J., 1998. Chem. Commun., 1998:455–456.
5. Singh, S. K., and Wengel, J., 1998. Chem. Commun.,:1247–1248.
6. Wengel, J., 1998. Acc. Chem. Res., 32:301–310.
7. Koshkin, A. A., Nielsen, P., Meldgaard, M., Rajwanshi, V. K., Singh, S. K., and Wengel, J., 1998. J. Am. Chem. Soc., 120:13252–13253.
8. Koshkin, A. A., Rajwanshi, V. K., and Wengel, J., 1998. Tetrahedron Lett., 39:4381–4384.
9. Singh, S. K., Kumar, R., and Wengel, J., 1998. J. Org. Chem., 63:10035–10039.
10. Wengel, J., Koshkin, A., Singh, S. K., Nielsen, P., Meldgaard, M., Rajwanshi, V. K., Kumar, R., Skouv, J., Nielsen, C. B., Jacobsen, J. P., Jacobsen, N., and Olsen, C. E., 1999. Nucleosides Nucleotides, 18:1365–1370.
11. Petersen, M., Nielsen, C. B., Nielsen, K. E., Jensen, G. A., Bondensgaard, K., Singh, S. K., Rajwanshi, V. K., Koshkin, A. A., Dahl, B. M., Wengel, J., and Jacobsen, J. P., 1999. J. Mol. Recognition, in press
12. Dickerson, R. E., Bansal, M., Calladine, C. R., Diekmann, S., Hunter, W. N., Kennard, O., von Kitzing, E., Nelson, H. C.M., Lavery, R., Olson, W. K., Saenger, W., Shakked, Z., Soumpasis, D. M., Tung, C.-S., Sklenar, H., Wang, A. H.J., and Zhurkin, V. B., 1989. EMBO J., 8:1–4.
13. Saenger, W., 1984. Principles of Nucleic Acid Structures; Springer Verlag.
14. Liu, H., Spielmann, H. P., Ulyanov, N. A., Wemmer, D. E., and James, T. L., 1995. J. Bio. NMR, 6:390–402.
15. Borgias, B. A., and James, T. L., 1990. J. Magn. Reson., 87:475–487.
16. Borgias, B. A., Gochin, M., Kerwood, D., and James, T. L., 1990. Progr. NMR Spectrosc., 22:83–100.
17. Jacobsen, J. P., Pedersen, J. B., Hansen, L. F., and Wemmer, D. E., 1995. Nucleic Acids Res., 23:753–760.
18. Spielmann, H. P., Wemmer, D. E., and Jacobsen, J. P., 1995. Biochemistry, 34:8542–8553.
19. Hansen, L. F., Jensen, L. K., and Jacobsen, J. P., 1996. Nucl. Acids. Res., 24:859–867.
20. Stoerk, D., Hamed, A. A., Pedersen, E. B., and Jacobsen, J. P., 1997. Bioconjugate Chem., 8:869–877.
21. Faridi, J., Nielsen, K. E., Stein, P. C., and Jacobsen, J. P., 1997. J. Biomol. Struc. Dyn., 15:321–332.
22. Jensen, L. K., Gotfredsen, C. H., Bondensgaard, K., and Jacobsen, J. P., 1998. Acta. Chem. Scand., 52:641–650.
23. Bunkenborg, J., Stidsen, M. M., and Jacobsen, J. P., 1999. Bioconjugate Chem., In Press
24. Jacobsen, J. P., Pedersen, J. B., Hansen, L. F., and Wemmer, D. E., 1995. Nucleic Acids Res., 23:753–760.
25. Stein, P. C., Jacobsen, J. P., and Spielmann, H. P., 1995. J. Magn. Res. Ser. B, 109:93–96.
26. Lavery, R., and Sklenar, H., 1989. J. Biomol. Struc. Dyn., 7:655–667.
27. Lavery, R., and Sklenar, H., 1988. J. Biomol. Struc. Dyn., 6:63–91.
28. Hare, D. R., Wemmer, D. E., Chou, S.-H., Drobny, G., and Reid, B. R., 1983. J. Mol. Biol., 171:319–336.
29. Wüthrich, K., 1986. NMR of Proteins and Nucleic Acids; John Wiley & Sons.
30. Feigon, J., Leupin, W., Denny, W. A., and Kearns, D. R., 1983. Biochemistry, 22:5943–5951.
31. Scheek, R. M., Russo, N., Boelens, R., and Kaptein, R., 1983. J. Am. Chem. Soc., 105:2914–2916.
32. Boelens, R., Scheek, R. M., Dijkstra, K., and Kaptein, R., 1985. J. Magn. Reson., 62:378–386.
33. Gotfredsen, C. H., Spielmann, H. P., Wengel, J., and Jacobsen, J. P., 1996. Bioconjugate Chem., 7:680–688.
34. Petersen, M., and Jacobsen, J. P., 1998. Bioconjugate Chem., 9:331–340.
35. Johansen, F., and Jacobsen, J. P., 1998. J. Biomol. Struc. Dyn., 16:205–222.
36. Mujeeb, A., Kerwin, S. M., Kenyon, G. L., and James, T. L., 1993. Biochemistry, 32:13419–13431.
37. Weisz, K., Shafer, R. H., Egan, W., and James, T. L., 1994. Biochemistry, 33:354–366.
38. Obika, S., Nanbu, D., Hari, Y., Mori, K., In, Y., Ishida, T., and Imanishi, T., 1997. Tetrahedron Lett., 38:8735
39. Baleja, J. D., pon, R. T., and Sykes, B. D., 1990. Biochemistry, 29:4828–4839.
40. Schmitz, U., Sethson, I., Egan, W. M., and James, T. L., 1992. J. Mol. Biol., 227:510–531.
41. Kintanar, A., Klevit, R. E., and Reid, B. R., 1987. Nucleic Acids Res., 15:5845–5862.
42. Spielmann, H. P., 1998. Unpublished results
43. Lubini, P., Zürcher, W., and Egli, M., 1994. Chemistry & Biology, 1:39–45.
44. Blommers, M. J.J., Pieles, U., and De Mesmaeker, A., 1994. Nucleic Acids Res., 22:4187–4194.
45. Propenda, M., Biala, E., Milecki, J., and Adamiak, R. W., 1997. Nucl. Acids. Res., 25:4589–4598.
46. Adamiak, D. A., Milecki, J., Propenda, M., Adamiak, R. W., Dauter, Z., and Rypniewski, W. R., 1997. Nucl. Acids. Res., 25:4599–4607.