-
2
-
-
0015749250
-
Refinement of the Structure of B-DNA and Implications for the Analysis of X-Ray Diffraction Data from Fibers of Biopolymers
-
Arnott, S., and Hukins, D. W. L. (1973) Refinement of the Structure of B-DNA and Implications for The Analysis of X-Ray Diffraction Data from Fibers of Biopolymers. J. Mol. Biol. 81, 93-105.
-
(1973)
J. Mol. Biol.
, vol.81
, pp. 93-105
-
-
Arnott, S.1
Hukins, D.W.L.2
-
3
-
-
0025339406
-
Solution Structure of Phage λ Half-Operator DNA by Use of NMR, Restrained Molecular Dynamics, and NOE-Based Refinement
-
Baleja, J. D., Pon, R. T., and Sykes, B. D. (1990) Solution Structure of Phage λ Half-Operator DNA by Use of NMR, Restrained Molecular Dynamics, and NOE-Based Refinement. Biochemistry 29, 4828-4839.
-
(1990)
Biochemistry
, vol.29
, pp. 4828-4839
-
-
Baleja, J.D.1
Pon, R.T.2
Sykes, B.D.3
-
4
-
-
0027078718
-
In Vitro Evolution of Intrinsically Bent DNA
-
Beutel, B. A., and Gold, L. (1992) In Vitro Evolution of Intrinsically Bent DNA. J. Mol. Biol. 228, 803-812.
-
(1992)
J. Mol. Biol.
, vol.228
, pp. 803-812
-
-
Beutel, B.A.1
Gold, L.2
-
5
-
-
0027971706
-
An Approach to the Structure Determination of Nucleic Acid Analogues Hybridized to RNA. NMR Studies of a Duplex between 2′-OMe RNA and an Oligonucleotide Containing a Single Amide Backbone Modification
-
Blommers, M. J. J., Pieles, U., and De Mesmaeker, A. (1994) An Approach to the Structure Determination of Nucleic Acid Analogues Hybridized to RNA. NMR Studies of a Duplex Between 2′-OMe RNA and an Oligonucleotide Containing a Single Amide Backbone Modification. Nucleic Acids Res. 22, 4187-4194.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4187-4194
-
-
Blommers, M.J.J.1
Pieles, U.2
De Mesmaeker, A.3
-
6
-
-
0000146208
-
1H NMR Spectra of Oligonucleotides by Two-Dimensional NMR Spectroscopy. Application to a lac Operator Fragment
-
1H NMR Spectra of Oligonucleotides by Two-Dimensional NMR Spectroscopy. Application to a lac Operator Fragment. J. Magn. Reson. 62, 378-386.
-
(1985)
J. Magn. Reson.
, vol.62
, pp. 378-386
-
-
Boelens, R.1
Scheek, R.M.2
Dijkstra, K.3
Kaptein, R.4
-
7
-
-
0000425457
-
MARDIGRAS - A Procedure for Matrix Analysis of Relaxation for Discerning Geometry of an Aqueous Structure
-
Borgias, B. A., and James, T. L. (1990) MARDIGRAS - A Procedure for Matrix Analysis of Relaxation for Discerning Geometry of an Aqueous Structure. J. Magn. Reson. 87, 475-487.
-
(1990)
J. Magn. Reson.
, vol.87
, pp. 475-487
-
-
Borgias, B.A.1
James, T.L.2
-
8
-
-
11244279679
-
Relaxation Matrix Analysis of 2D NMR Data
-
Borgias, B. A., Gochin, M., Kerwood, D. J., and James, T. L. (1990) Relaxation Matrix Analysis of 2D NMR Data. Progr. NMR Spectrosc. 22, 83-100.
-
(1990)
Progr. NMR Spectrosc.
, vol.22
, pp. 83-100
-
-
Borgias, B.A.1
Gochin, M.2
Kerwood, D.J.3
James, T.L.4
-
9
-
-
0024454946
-
Definitions and Nomenclature of Nucleic acid Structure Parameters
-
Dickerson, R. E., Bansal, M., Calladine, C. R., Diekmann, S., Hunter, W. N., Kennard, O., von Kitzing, E., Nelson, H. C. M., Lavery, R., Olson, W. K., Saenger, W., Shakked, Z., Soumpasis, D. M., Tung, C.-S., Sklenar, H., Wang, A. H.-J., and Zhurkin, V. B. (1989) Definitions and Nomenclature of Nucleic acid Structure Parameters. EMBO J. 8, 1-4.
-
(1989)
EMBO J.
, vol.8
, pp. 1-4
-
-
Dickerson, R.E.1
Bansal, M.2
Calladine, C.R.3
Diekmann, S.4
Hunter, W.N.5
Kennard, O.6
Von Kitzing, E.7
Nelson, H.C.M.8
Lavery, R.9
Olson, W.K.10
Saenger, W.11
Shakked, Z.12
Soumpasis, D.M.13
Tung, C.-S.14
Sklenar, H.15
Wang, A.H.-J.16
Zhurkin, V.B.17
-
10
-
-
0027364174
-
PNA Hybridizes to Complementary Oligonucleotides Obeying the Watson-Crick Hydrogen-Bonding Rules
-
Egholm, M., Buchardt, O., Christensen, L., Behrens, C., Freier, S. M., Driver, D. A., Berg, R. H., Kim, S. K., Norden, B., and Nielsen, P. E. (1993) PNA Hybridizes to Complementary Oligonucleotides Obeying the Watson-Crick Hydrogen-Bonding Rules. Nature 365, 566-568.
-
(1993)
Nature
, vol.365
, pp. 566-568
-
-
Egholm, M.1
Buchardt, O.2
Christensen, L.3
Behrens, C.4
Freier, S.M.5
Driver, D.A.6
Berg, R.H.7
Kim, S.K.8
Norden, B.9
Nielsen, P.E.10
-
11
-
-
0025996763
-
Molecular Structure of a DNA Decamer Containing an Anticancer Nucleoside Arabinosylcytosine: Conformational Perturbation by Arabinosylcytosine in B-DNA
-
Gao, Y.-G., Van der Marel, G. A., Van Boom, J. H., and Wang, A. H.-J. (1991) Molecular Structure of a DNA Decamer Containing an Anticancer Nucleoside Arabinosylcytosine: Conformational Perturbation by Arabinosylcytosine in B-DNA. Biochemistry 30, 9922-9931.
-
(1991)
Biochemistry
, vol.30
, pp. 9922-9931
-
-
Gao, Y.-G.1
Van Der Marel, G.A.2
Van Boom, J.H.3
Wang, A.H.-J.4
-
12
-
-
0028060389
-
Novel Oligodeoxynucleotide Analogues Containing a 2′-O-Methylarabinonucleoside
-
Gotfredsen, C. H., Jacobsen, J. P., and Wengel, J. (1994) Novel Oligodeoxynucleotide Analogues Containing a 2′-O-Methylarabinonucleoside. Tetrahedron Lett. 35, 6941-6944.
-
(1994)
Tetrahedron Lett.
, vol.35
, pp. 6941-6944
-
-
Gotfredsen, C.H.1
Jacobsen, J.P.2
Wengel, J.3
-
13
-
-
0030221260
-
Synthesis and Proporties of α- and β-Oligonucleotides Containing α- and β-1-(2-O-Methyl-D-arabinofuranosyl)thymine
-
Gotfredsen, C. H., Jacobsen, J. P., and Wengel, J. (1996) Synthesis and Proporties of α- and β-Oligonucleotides Containing α- and β-1-(2-O-Methyl-D-arabinofuranosyl)thymine. Bioorg. Med. Chem. 4, 1217-1225.
-
(1996)
Bioorg. Med. Chem.
, vol.4
, pp. 1217-1225
-
-
Gotfredsen, C.H.1
Jacobsen, J.P.2
Wengel, J.3
-
14
-
-
0026389037
-
Solvent Signal Suppression in NMR
-
Guéron, M., Plateau, P., and Decorps, M. (1991) Solvent Signal Suppression In NMR. Progr. NMR Spectrosc. 23, 135-209.
-
(1991)
Progr. NMR Spectrosc.
, vol.23
, pp. 135-209
-
-
Guéron, M.1
Plateau, P.2
Decorps, M.3
-
15
-
-
0019332380
-
Nucleoside Conformation is Determined by the Electronegativity of the Sugar Substituent
-
Guschlbauer, W., and Jankowski, K. (1980) Nucleoside Conformation is Determined by the Electronegativity of the Sugar Substituent. Nucleic Acids Res. 8, 1421-1433.
-
(1980)
Nucleic Acids Res.
, vol.8
, pp. 1421-1433
-
-
Guschlbauer, W.1
Jankowski, K.2
-
16
-
-
0021105577
-
Assignment of the Non-Exchangeable Proton Resonances of d(C-G-C-G-A-A-T-T-C-G-C-G) Using Two-Dimensional Nuclear Magnetic Resonance Methods
-
Hare, D. R., Wemmer, D. E., Chou, S.-H., Drobny, G., and Reid, B. R. (1983) Assignment of the Non-Exchangeable Proton Resonances of d(C-G-C-G-A-A-T-T-C-G-C-G) Using Two-Dimensional Nuclear Magnetic Resonance Methods. J. Mol. Biol. 171, 319-336.
-
(1983)
J. Mol. Biol.
, vol.171
, pp. 319-336
-
-
Hare, D.R.1
Wemmer, D.E.2
Chou, S.-H.3
Drobny, G.4
Reid, B.R.5
-
17
-
-
0025339373
-
Specific Regulation of Gene Expression by Antisense, Sense and Antigene Nucleic Acids
-
Hélène, C., and Toulmé, J.-J. (1990) Specific Regulation of Gene Expression by Antisense, Sense and Antigene Nucleic Acids. Biochim. Biophys. Acta 1049, 99-125.
-
(1990)
Biochim. Biophys. Acta
, vol.1049
, pp. 99-125
-
-
Hélène, C.1
Toulmé, J.-J.2
-
18
-
-
0023651145
-
Synthesis and Hybridization Studies on Two Complementary Nona(2′-O-methyl)ribonucleotides
-
Inoue, H., Hayase, Y., Imura, A., Iwai, S., Miura, K., and Ohtsuka, E. (1987) Synthesis and Hybridization Studies on Two Complementary Nona(2′-O-methyl)ribonucleotides. Nucleic Acids Res. 15, 6131-6147.
-
(1987)
Nucleic Acids Res.
, vol.15
, pp. 6131-6147
-
-
Inoue, H.1
Hayase, Y.2
Imura, A.3
Iwai, S.4
Miura, K.5
Ohtsuka, E.6
-
19
-
-
0028043181
-
Synthesis of 3′-C-Hydroxymethylthymidine: Introduction of a Novel Classs of Deoxynucleosides and Oligodeoxynucleotides
-
Jørgensen, P. N., Stein, P. C., and Wengel, J. (1994). Synthesis of 3′-C-Hydroxymethylthymidine: Introduction of a Novel Classs of Deoxynucleosides and Oligodeoxynucleotides. J. Am. Chem. Soc. 116, 2231-2232.
-
(1994)
J. Am. Chem. Soc.
, vol.116
, pp. 2231-2232
-
-
Jørgensen, P.N.1
Stein, P.C.2
Wengel, J.3
-
20
-
-
0023663548
-
Two-Dimensional NMR Investigation of a Bent DNA Fragment: Assignment of the Proton Resonances and Preliminary Structure Analysis
-
Kintanar, A., Klevit, R. E., and Reid, B. R. (1987) Two-Dimensional NMR Investigation of a Bent DNA Fragment: Assignment of the Proton Resonances and Preliminary Structure Analysis. Nucleic Acids Res. 15, 5845-5862.
-
(1987)
Nucleic Acids Res.
, vol.15
, pp. 5845-5862
-
-
Kintanar, A.1
Klevit, R.E.2
Reid, B.R.3
-
21
-
-
0024058085
-
The Definition af Generalized Helicoidal Parameters and of Axis Curvature for Irregular Nucleic Acids
-
Lavery, R., and Sklenar, H. (1988) The Definition af Generalized Helicoidal Parameters and of Axis Curvature for Irregular Nucleic Acids. J. Biomol. Struct. Dyn. 6, 63-91.
-
(1988)
J. Biomol. Struct. Dyn.
, vol.6
, pp. 63-91
-
-
Lavery, R.1
Sklenar, H.2
-
22
-
-
0024539180
-
Defining the Structure of Irregular Nucleic Acids: Conventions and Principles
-
Lavery, R., and Sklenar, H. (1989) Defining the Structure of Irregular Nucleic Acids: Conventions and Principles. J. Biomol. Struct. Dyn. 7, 655-667.
-
(1989)
J. Biomol. Struct. Dyn.
, vol.7
, pp. 655-667
-
-
Lavery, R.1
Sklenar, H.2
-
23
-
-
0027204049
-
Oligodeoxynuceleotides Containing 2′-O-Modified Adenosine: Synthesis and Effects on Stability of DNA:RNA Duplexes
-
Lesnik, E. A., Guinosso, C. J., Kawasaki, A. M., Sasmor, H., Zounes, M., Cummins, L. L., Ecker, D. J., Cook, P. D., and Freier, S. M. (1993) Oligodeoxynuceleotides Containing 2′-O-Modified Adenosine: Synthesis and Effects on Stability of DNA:RNA Duplexes. Biochemistry 32, 7832-7838.
-
(1993)
Biochemistry
, vol.32
, pp. 7832-7838
-
-
Lesnik, E.A.1
Guinosso, C.J.2
Kawasaki, A.M.3
Sasmor, H.4
Zounes, M.5
Cummins, L.L.6
Ecker, D.J.7
Cook, P.D.8
Freier, S.M.9
-
24
-
-
0029450044
-
Interproton Distances Bounds from 2D-NOE intensities: Effect of Experimental Noise and Peak Integrations Errors
-
Liu, H., Spielmann, H. P., Ulyanov, N. A., Wemmer, D. E., and James, T. L. (1995) Interproton Distances Bounds from 2D-NOE intensities: Effect of Experimental Noise and Peak Integrations Errors. J. Biomol. NMR 6, 390-402.
-
(1995)
J. Biomol. NMR
, vol.6
, pp. 390-402
-
-
Liu, H.1
Spielmann, H.P.2
Ulyanov, N.A.3
Wemmer, D.E.4
James, T.L.5
-
25
-
-
0028500180
-
Stabilizing effects of the RNA 2′-substituent: Crystal Structure of an Oligodeoxynucleotide Duplex Containing 2′-O-Methylated Adenosines
-
Lubini, P., Zürcher, W., and Egli, M. (1994) Stabilizing effects of the RNA 2′-substituent: Crystal Structure of an Oligodeoxynucleotide Duplex Containing 2′-O-Methylated Adenosines. Chem. Biol. 1, 39-45.
-
(1994)
Chem. Biol.
, vol.1
, pp. 39-45
-
-
Lubini, P.1
Zürcher, W.2
Egli, M.3
-
26
-
-
0027751258
-
Solution Structure of a Conserved DNA Sequence from the HIV-1 Genome: Restrained Molecular Dynamics Simulation with Distance and Torsion Angle Restraints Derived from Two-Dimensional NMR Spectra
-
Mujeeb, A., Kerwin, S. M., Kenyon, G. L., and James, T. L. (1993) Solution Structure of a Conserved DNA Sequence from the HIV-1 Genome: Restrained Molecular Dynamics Simulation with Distance and Torsion Angle Restraints Derived from Two-Dimensional NMR Spectra. Biochemistry 32, 13419-13431.
-
(1993)
Biochemistry
, vol.32
, pp. 13419-13431
-
-
Mujeeb, A.1
Kerwin, S.M.2
Kenyon, G.L.3
James, T.L.4
-
28
-
-
0028892069
-
Nuclear Magnetic Resonance and Nucleic Acids
-
T. L. James, Ed. Academic Press, New York
-
Schmitz, U., and James, T. L. (1996) Nuclear Magnetic Resonance and Nucleic Acids. In Methods in Enzymology (T. L. James, Ed.) Vol. 261, pp 3-44, Academic Press, New York.
-
(1996)
Methods in Enzymology
, vol.261
, pp. 3-44
-
-
Schmitz, U.1
James, T.L.2
-
29
-
-
0026758712
-
Solution Structure of a DNA Octamer Containing the Pribnow Box via Restrained Molecular Dynamics Simulation with Distance and Torsional Angle Constraints Derived from Two-Dimensional Nuclear Magnetic Resonance Spectral Fitting
-
Schmitz, U., Sethson, I., Egan, W. M., and James, T. L. (1992) Solution Structure of a DNA Octamer Containing the Pribnow Box via Restrained Molecular Dynamics Simulation with Distance and Torsional Angle Constraints Derived from Two-Dimensional Nuclear Magnetic Resonance Spectral Fitting. J. Mol. Biol. 227, 510-531.
-
(1992)
J. Mol. Biol.
, vol.227
, pp. 510-531
-
-
Schmitz, U.1
Sethson, I.2
Egan, W.M.3
James, T.L.4
-
30
-
-
0028020868
-
Solution Structure of a DNA Dodecamer Containing the Anti-Neoplastic Agent Arabinosylcytosine: Combined Use of NMR, Restrained Molecular Dynamics, and Full Relaxation Matrix Refinement
-
Schweitzer, B. I., Mikita, T., Kellogg, G. W., Gardner, K. H., and Beardsley, G. P. (1994) Solution Structure of a DNA Dodecamer Containing the Anti-Neoplastic Agent Arabinosylcytosine: Combined Use of NMR, Restrained Molecular Dynamics, and Full Relaxation Matrix Refinement. Biochemistry 33, 11460-11475.
-
(1994)
Biochemistry
, vol.33
, pp. 11460-11475
-
-
Schweitzer, B.I.1
Mikita, T.2
Kellogg, G.W.3
Gardner, K.H.4
Beardsley, G.P.5
-
31
-
-
0024519705
-
Highly Efficient Chemical Synthesis of 2′-O-Methyloligoribonucleotides and Tetrabiotinylated Derivatives; Novel Probes that are Resistant to Degradation by RNA or DNA Specific Nucleases
-
Sproat, B. S., Lamond, A. I., Beijer, B., Neuner, P., and Ryder, U. (1989) Highly Efficient Chemical Synthesis of 2′-O-Methyloligoribonucleotides and Tetrabiotinylated Derivatives; Novel Probes that are Resistant to Degradation by RNA or DNA Specific Nucleases. Nucleic Acids Res. 17, 3373-3386.
-
(1989)
Nucleic Acids Res.
, vol.17
, pp. 3373-3386
-
-
Sproat, B.S.1
Lamond, A.I.2
Beijer, B.3
Neuner, P.4
Ryder, U.5
-
32
-
-
0001619710
-
A Liniar Relationship Betweeen Electronegativity of 2′-Substituents and Conformation of Adenine Nucleosides
-
Uesugi, S., Miki, H., Ikehara, M., Iwahashi, H., and Kyogoku, Y. (1979) A Liniar Relationship Betweeen Electronegativity of 2′-Substituents and Conformation of Adenine Nucleosides. Tetrahedron Lett. 42, 4073-4076.
-
(1979)
Tetrahedron Lett.
, vol.42
, pp. 4073-4076
-
-
Uesugi, S.1
Miki, H.2
Ikehara, M.3
Iwahashi, H.4
Kyogoku, Y.5
-
33
-
-
11944267365
-
Antisense Oligonucleotides: A New Therapeutic Principle
-
Uhlmann, E., and Peyman, A. (1990) Antisense Oligonucleotides: A New Therapeutic Principle. Chem. Rev. 90, 543-584.
-
(1990)
Chem. Rev.
, vol.90
, pp. 543-584
-
-
Uhlmann, E.1
Peyman, A.2
-
34
-
-
0028013525
-
Solution Structure of the Octamer Motif in Immunoglobulin Genes via Restrained Molecular Dynamics Calculations
-
Weisz, K., Shafer, R. H., Egan, W., and James, T. L. (1994) Solution Structure of the Octamer Motif in Immunoglobulin Genes via Restrained Molecular Dynamics Calculations. Biochemistry 33, 354-366.
-
(1994)
Biochemistry
, vol.33
, pp. 354-366
-
-
Weisz, K.1
Shafer, R.H.2
Egan, W.3
James, T.L.4
-
35
-
-
36849135534
-
Spin Relaxation Processes in a Two-Proton System Undergoing Anisotropie Reorientation
-
Woessner, D. E. (1962) Spin Relaxation Processes in a Two-Proton System Undergoing Anisotropie Reorientation. J. Chem. Phys. 36, 1-4.
-
(1962)
J. Chem. Phys.
, vol.36
, pp. 1-4
-
-
Woessner, D.E.1
-
37
-
-
0011205264
-
Structure of an Alternating-B DNA Helix and Its Relationship to A-tract DNA
-
Yoon, C., Privé, G. G., Goodsell, D. S., and Dickerson, R. E. (1988) Structure of an Alternating-B DNA Helix and Its Relationship to A-tract DNA. Proc. Natl. Acad. Sci. U.S.A. 85, 6332-6336.
-
(1988)
Proc. Natl. Acad. Sci. U.S.A.
, vol.85
, pp. 6332-6336
-
-
Yoon, C.1
Privé, G.G.2
Goodsell, D.S.3
Dickerson, R.E.4
-
38
-
-
0026649309
-
Alternative Structures for Alternating Poly(dA-dT) Tracts: The Structure of the B-DNA Decamer C-G-A-T-A-T-A-T-C-G
-
Yuan, H., Quintana, J., and Dickerson, R. E. (1992) Alternative Structures for Alternating Poly(dA-dT) Tracts: The Structure of the B-DNA Decamer C-G-A-T-A-T-A-T-C-G. Biochemistry 31, 8009-8021.
-
(1992)
Biochemistry
, vol.31
, pp. 8009-8021
-
-
Yuan, H.1
Quintana, J.2
Dickerson, R.E.3
|