-
1
-
-
0023221419
-
A small catalytic oligoribonucleotide
-
Uhlenbeck O.C. A small catalytic oligoribonucleotide. Nature. 328:1987;596-600.
-
(1987)
Nature
, vol.328
, pp. 596-600
-
-
Uhlenbeck, O.C.1
-
2
-
-
0024448572
-
Sequences required for self-catalysed cleavage of the satellite RNA of tobacco ringspot virus
-
Haseloff J., Gerlach W.L. Sequences required for self-catalysed cleavage of the satellite RNA of tobacco ringspot virus. Gene. 82:1989;43-52.
-
(1989)
Gene
, vol.82
, pp. 43-52
-
-
Haseloff, J.1
Gerlach, W.L.2
-
4
-
-
0030939002
-
The structure, function and application of the hammerhead ribozyme
-
Birikh K.R., Heaton P.A., Eckstein F. The structure, function and application of the hammerhead ribozyme. Eur. J. Biochem. 245:1997;1-16.
-
(1997)
Eur. J. Biochem
, vol.245
, pp. 1-16
-
-
Birikh, K.R.1
Heaton, P.A.2
Eckstein, F.3
-
5
-
-
0030668679
-
Chemical engineering of RNase resistant and catalytically active hammerhead ribozymes
-
Burlina F., Favre A., Fourrey J.L. Chemical engineering of RNase resistant and catalytically active hammerhead ribozymes. Bioorg. Med. Chem. 5:1997;1999-2010.
-
(1997)
Bioorg. Med. Chem
, vol.5
, pp. 1999-2010
-
-
Burlina, F.1
Favre, A.2
Fourrey, J.L.3
-
6
-
-
0028063567
-
Three-dimensional structure of a hammerhead ribozyme
-
Pley H.W., Flaherty K.M., McKay D.B. Three-dimensional structure of a hammerhead ribozyme. Nature. 372:1994;68-74.
-
(1994)
Nature
, vol.372
, pp. 68-74
-
-
Pley, H.W.1
Flaherty, K.M.2
McKay, D.B.3
-
7
-
-
0029073091
-
The crystal structure of an all-RNA hammerhead ribozyme: A proposed mechanism for RNA catalytic cleavage
-
Scott W.G., Finch J.T., Klug A. The crystal structure of an all-RNA hammerhead ribozyme: a proposed mechanism for RNA catalytic cleavage. Cell. 81:1995;991-1002.
-
(1995)
Cell
, vol.81
, pp. 991-1002
-
-
Scott, W.G.1
Finch, J.T.2
Klug, A.3
-
8
-
-
0030476765
-
Capturing the structure of a catalytic RNA intermediate: The hammerhead ribozyme
-
Scott W.G., Murray J.B., Arnold J., Stoddard B.L., Klug A. Capturing the structure of a catalytic RNA intermediate: the hammerhead ribozyme. Science. 274:1996;2065-2069.
-
(1996)
Science
, vol.274
, pp. 2065-2069
-
-
Scott, W.G.1
Murray, J.B.2
Arnold, J.3
Stoddard, B.L.4
Klug, A.5
-
9
-
-
0032489357
-
The structural basis of hammerhead ribozyme self-cleavage
-
Murray J.B., Terwey D.P., Maloney L., Karpeisky A., Usman N., Beigelman L., Scott W.G. The structural basis of hammerhead ribozyme self-cleavage. Cell. 92:1998;665-673.
-
(1998)
Cell
, vol.92
, pp. 665-673
-
-
Murray, J.B.1
Terwey, D.P.2
Maloney, L.3
Karpeisky, A.4
Usman, N.5
Beigelman, L.6
Scott, W.G.7
-
10
-
-
0028004021
-
Global conformation of a self-cleaving hammerhead RNA
-
Amiri K.M., Hagerman P.J. Global conformation of a self-cleaving hammerhead RNA. Biochemistry. 33:1994;13172-13177.
-
(1994)
Biochemistry
, vol.33
, pp. 13172-13177
-
-
Amiri, K.M.1
Hagerman, P.J.2
-
11
-
-
0027973506
-
A three-dimensional model for the hammerhead ribozyme based on fluorescence measurements
-
Tuschl T., Gohlke C., Jovin T.M., Westhof E., Eckstein F. A three-dimensional model for the hammerhead ribozyme based on fluorescence measurements. Science. 266:1994;785-789.
-
(1994)
Science
, vol.266
, pp. 785-789
-
-
Tuschl, T.1
Gohlke, C.2
Jovin, T.M.3
Westhof, E.4
Eckstein, F.5
-
12
-
-
0028962525
-
Ionic interactions and the global conformations of the hammerhead ribozyme
-
Bassi G.S., Mollegaard N.E., Murchie A.I., Von K.E., Lilley D.M. Ionic interactions and the global conformations of the hammerhead ribozyme. Nat. Struct. Biol. 2:1995;45-55.
-
(1995)
Nat. Struct. Biol
, vol.2
, pp. 45-55
-
-
Bassi, G.S.1
Mollegaard, N.E.2
Murchie, A.I.3
Von, K.E.4
Lilley, D.M.5
-
13
-
-
0030590218
-
The global conformation of an active hammerhead RNA during the process of self-cleavage
-
Amiri K.M., Hagerman P.J. The global conformation of an active hammerhead RNA during the process of self-cleavage. J. Mol. Biol. 261:1996;125-134.
-
(1996)
J. Mol. Biol
, vol.261
, pp. 125-134
-
-
Amiri, K.M.1
Hagerman, P.J.2
-
14
-
-
0029903452
-
The ion-induced folding of the hammerhead ribozyme: Core sequence changes that perturb folding into the active conformation
-
Bassi G.S., Murchie A.I., Lilley D.M. The ion-induced folding of the hammerhead ribozyme: core sequence changes that perturb folding into the active conformation. RNA. 2:1996;756-768.
-
(1996)
RNA
, vol.2
, pp. 756-768
-
-
Bassi, G.S.1
Murchie, A.I.2
Lilley, D.M.3
-
15
-
-
0031463467
-
Ion-induced folding of the hammerhead ribozyme: A fluorescence resonance energy transfer study
-
Bassi G.S., Murchie A., Walter F., Clegg R.M., Lilley D. Ion-induced folding of the hammerhead ribozyme: a fluorescence resonance energy transfer study. EMBO J. 16:1997;7481-7489.
-
(1997)
EMBO J
, vol.16
, pp. 7481-7489
-
-
Bassi, G.S.1
Murchie, A.2
Walter, F.3
Clegg, R.M.4
Lilley, D.5
-
16
-
-
0028244571
-
Multiple folded conformations of a hammerhead ribozyme domain under cleavage conditions
-
Woisard A., Fourrey J.L., Favre A. Multiple folded conformations of a hammerhead ribozyme domain under cleavage conditions. J. Mol. Biol. 239:1994;366-370.
-
(1994)
J. Mol. Biol
, vol.239
, pp. 366-370
-
-
Woisard, A.1
Fourrey, J.L.2
Favre, A.3
-
17
-
-
0029151232
-
Hammerhead ribozyme: A three dimensional model based on photo-crosslinking data
-
Laugaa P., Woisard A., Fourrey J.L., Favre A. Hammerhead ribozyme: a three dimensional model based on photo-crosslinking data. C.R. Acad. Sci. Life Sci. 318:1995;307-313.
-
(1995)
C.R. Acad. Sci. Life Sci
, vol.318
, pp. 307-313
-
-
Laugaa, P.1
Woisard, A.2
Fourrey, J.L.3
Favre, A.4
-
18
-
-
0030876444
-
Involvement of a specific metal ion in the transition of the hammerhead ribozyme to its catalytic conformation
-
Peracchi A., Beigelman L., Scott E.C., Uhlenbeck O.C., Herschlag D. Involvement of a specific metal ion in the transition of the hammerhead ribozyme to its catalytic conformation. J. Biol. Chem. 272:1997;26822-26826.
-
(1997)
J. Biol. Chem
, vol.272
, pp. 26822-26826
-
-
Peracchi, A.1
Beigelman, L.2
Scott, E.C.3
Uhlenbeck, O.C.4
Herschlag, D.5
-
19
-
-
84913011306
-
Hammerhead ribozyme tertiary folding : Intrinsic photolabeling studies
-
Woisard A., Favre A., Clivio P., Fourrey J.L. Hammerhead ribozyme tertiary folding : Intrinsic photolabeling studies. J. Am. Chem. Soc. 114:1992;10072-10074.
-
(1992)
J. Am. Chem. Soc
, vol.114
, pp. 10072-10074
-
-
Woisard, A.1
Favre, A.2
Clivio, P.3
Fourrey, J.L.4
-
20
-
-
0032192761
-
The hammerhead, hairpin and VS ribozymes are catalytically proficient in monovalent cations alone
-
Murray J.B., Seyhan A.A., Walter N.G., Burke J.M., Scott W.G. The hammerhead, hairpin and VS ribozymes are catalytically proficient in monovalent cations alone. Chem. Biol. 5:1998;587-595.
-
(1998)
Chem. Biol
, vol.5
, pp. 587-595
-
-
Murray, J.B.1
Seyhan, A.A.2
Walter, N.G.3
Burke, J.M.4
Scott, W.G.5
-
21
-
-
0026559243
-
Novel insight into the stereochemical pathway leading to (6-4) pyridimine-pyrimidone photoproducts in DNA
-
Clivio P., Fourrey J.L., Gasche J., Favre A. Novel insight into the stereochemical pathway leading to (6-4) pyridimine-pyrimidone photoproducts in DNA. Tetrahedron Lett. 33:1992;1615-1618.
-
(1992)
Tetrahedron Lett
, vol.33
, pp. 1615-1618
-
-
Clivio, P.1
Fourrey, J.L.2
Gasche, J.3
Favre, A.4
-
22
-
-
0002855274
-
4-thiouridine as an intrinsic photoaffinity probe of nucleic acid structure and interactions
-
H. Morrison. John Wiley and Sons, New York
-
Favre A. 4-thiouridine as an intrinsic photoaffinity probe of nucleic acid structure and interactions. Morrison H. Bioorganic photochemistry: photochemistry and the nucleic acids. 1990;379-425 John Wiley and Sons, New York.
-
(1990)
Bioorganic Photochemistry: Photochemistry and the Nucleic Acids
, pp. 379-425
-
-
Favre, A.1
-
23
-
-
0028807644
-
The roles of the conserved pyrimidine bases in hammerhead ribozyme catalysis: Evidence for a magnesium ion-binding site
-
Murray J.B., Adams C.J., Arnold J.R., Stockley P.G. The roles of the conserved pyrimidine bases in hammerhead ribozyme catalysis: evidence for a magnesium ion-binding site. Biochem. J. 312:1995;487-494.
-
(1995)
Biochem. J
, vol.312
, pp. 487-494
-
-
Murray, J.B.1
Adams, C.J.2
Arnold, J.R.3
Stockley, P.G.4
-
24
-
-
0001810342
-
Photocoupling of the intrinsic photoaffinity probe 4-thiouridine to nucleosides and oligonucleotides
-
Favre A., LemaigreDubreuil Y., Fourrey J.L. Photocoupling of the intrinsic photoaffinity probe 4-thiouridine to nucleosides and oligonucleotides. New J. Chem. 15:1991;593-599.
-
(1991)
New J. Chem
, vol.15
, pp. 593-599
-
-
Favre, A.1
Lemaigredubreuil, Y.2
Fourrey, J.L.3
-
25
-
-
0027163997
-
Folding of DNA substrate-hairpin ribozyme domains: Use of deoxy 4-thiouridine as an intrinsic photolabel
-
DosSantos V.D., Vianna A.L., Fourrey J.L., Favre A. Folding of DNA substrate-hairpin ribozyme domains: use of deoxy 4-thiouridine as an intrinsic photolabel. Nucleic Acids Res. 21:1993;201-207.
-
(1993)
Nucleic Acids Res
, vol.21
, pp. 201-207
-
-
Dossantos, V.D.1
Vianna, A.L.2
Fourrey, J.L.3
Favre, A.4
-
26
-
-
0029814112
-
RNA photolabeling mechanistic studies: X-ray crystal structure of the photoproduct formed between 4-thiothymidine and adenosine upon near UV irradiation
-
Saintomé C., Clivio P., Favre A., Fourrey J.L., Riche C. RNA photolabeling mechanistic studies: X-ray crystal structure of the photoproduct formed between 4-thiothymidine and adenosine upon near UV irradiation. J. Am. Chem. Soc. 118:1996;8142-8143.
-
(1996)
J. Am. Chem. Soc
, vol.118
, pp. 8142-8143
-
-
Saintomé, C.1
Clivio, P.2
Favre, A.3
Fourrey, J.L.4
Riche, C.5
-
27
-
-
0027732494
-
Evidence for the role of solvated metal hydroxide in the hammerhead cleavage mechanism
-
Dahm S.C., Derrick W.B., Uhlenbeck O.C. Evidence for the role of solvated metal hydroxide in the hammerhead cleavage mechanism. Biochemistry. 32:1993;13040-13045.
-
(1993)
Biochemistry
, vol.32
, pp. 13040-13045
-
-
Dahm, S.C.1
Derrick, W.B.2
Uhlenbeck, O.C.3
-
28
-
-
0029945037
-
Unexpected anisotropy in substrate cleavage rates by asymmetric hammerhead ribozymes
-
Hendry P., McCall M. Unexpected anisotropy in substrate cleavage rates by asymmetric hammerhead ribozymes. Nucleic Acids Res. 24:1996;2679-2684.
-
(1996)
Nucleic Acids Res
, vol.24
, pp. 2679-2684
-
-
Hendry, P.1
McCall, M.2
-
29
-
-
0030696653
-
An ultraviolet crosslink in the hammerhead ribozyme dependent on 2- thiocytidine or 4-thiouridine substitution
-
Wang L., Ruffner D.E. An ultraviolet crosslink in the hammerhead ribozyme dependent on 2- thiocytidine or 4-thiouridine substitution. Nucleic Acids Res. 25:1997;4355-4361.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 4355-4361
-
-
Wang, L.1
Ruffner, D.E.2
-
30
-
-
0014201799
-
Thiobases in Escherichia colitransfer RNA: 2-thiocytosine and 5-methylaminomethyl-2-thiouracil
-
Carbon J., David H., Studier M.H. Thiobases in Escherichia colitransfer RNA: 2-thiocytosine and 5-methylaminomethyl-2-thiouracil. Science. 161:1968;1146-1147.
-
(1968)
Science
, vol.161
, pp. 1146-1147
-
-
Carbon, J.1
David, H.2
Studier, M.H.3
-
31
-
-
0019800629
-
TRNA thiolated pyrimidines as targets for near-ultraviolet-induced synthesis of guanosine tetraphosphate in Escherichia coli
-
Thomas G., Thiam K., Favre A. tRNA thiolated pyrimidines as targets for near-ultraviolet-induced synthesis of guanosine tetraphosphate in Escherichia coli. Eur. J. Biochem. 119:1981;381-387.
-
(1981)
Eur. J. Biochem
, vol.119
, pp. 381-387
-
-
Thomas, G.1
Thiam, K.2
Favre, A.3
-
32
-
-
0032005336
-
Thionucleobases as intrinsic photoaffinity probes of nucleic acid structure and nucleic-acid-protein interactions
-
Favre A., Saintomé C., Fourrey J.L., Clivio P., Laugâa P. Thionucleobases as intrinsic photoaffinity probes of nucleic acid structure and nucleic-acid-protein interactions. J. Photochem. Photobiol. B. Biol. 42:1998;109-124.
-
(1998)
J. Photochem. Photobiol. B. Biol
, vol.42
, pp. 109-124
-
-
Favre, A.1
Saintomé, C.2
Fourrey, J.L.3
Clivio, P.4
Laugâa, P.5
-
33
-
-
0017010023
-
Intramolecular energy transfer in native tRNA at room temperature
-
Ballini J.P., Vigny P., Thomas G., Favre A. Intramolecular energy transfer in native tRNA at room temperature. Photochem. Photobiol. 24:1976;321-329.
-
(1976)
Photochem. Photobiol
, vol.24
, pp. 321-329
-
-
Ballini, J.P.1
Vigny, P.2
Thomas, G.3
Favre, A.4
-
34
-
-
0015497450
-
Conformational changes of transfer ribonucleic acid. Equilibrium phase diagrams
-
Cole P.E., Yang S.K., Crothers D.M. Conformational changes of transfer ribonucleic acid. Equilibrium phase diagrams. Biochemistry. 11:1972;4358-4368.
-
(1972)
Biochemistry
, vol.11
, pp. 4358-4368
-
-
Cole, P.E.1
Yang, S.K.2
Crothers, D.M.3
-
35
-
-
0030666652
-
A spermidine-induced conformational change of long-armed hammerhead ribozymes: Ionic requirements for fast cleavage kinetics
-
Hammann C., Hormes R., Sczakiel G., Tabler M. A spermidine-induced conformational change of long-armed hammerhead ribozymes: ionic requirements for fast cleavage kinetics. Nucleic Acids Res. 25:1997;4715-4722.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 4715-4722
-
-
Hammann, C.1
Hormes, R.2
Sczakiel, G.3
Tabler, M.4
-
36
-
-
0030849184
-
Evidence for a hydroxide ion bridging two magnesium ions at the active site of the hammerhead ribozyme
-
Hermann T., Auffinger P., Scott W.G., Westhof E. Evidence for a hydroxide ion bridging two magnesium ions at the active site of the hammerhead ribozyme. Nucleic Acids Res. 25:1997;3421-3427.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3421-3427
-
-
Hermann, T.1
Auffinger, P.2
Scott, W.G.3
Westhof, E.4
-
37
-
-
0029348087
-
Probing RNA tertiary structure: Interhelical crosslinking of the hammerhead ribozyme
-
Sigurdsson S.T., Tuschl T., Eckstein F. Probing RNA tertiary structure: interhelical crosslinking of the hammerhead ribozyme. RNA. 1:1995;575-583.
-
(1995)
RNA
, vol.1
, pp. 575-583
-
-
Sigurdsson, S.T.1
Tuschl, T.2
Eckstein, F.3
-
38
-
-
0032580975
-
Circular substrates of the hammerhead ribozyme shift the internal equilibrium further toward cleavage
-
Stage Z.T., Uhlenbeck O.C. Circular substrates of the hammerhead ribozyme shift the internal equilibrium further toward cleavage. Biochemistry. 37:1998;9386-9393.
-
(1998)
Biochemistry
, vol.37
, pp. 9386-9393
-
-
Stage, Z.T.1
Uhlenbeck, O.C.2
|