-
1
-
-
0343569210
-
Structure of human rhinovirus proteinase reveals a typsin-like polypeptide fold, RNA-binding site, and means for cleaving percusin polyprotein
-
Matthews, D.A., et al., & Worland, S. (1994). Structure of human rhinovirus proteinase reveals a typsin-like polypeptide fold, RNA-binding site, and means for cleaving percusin polyprotein. Cell 77, 1-20.
-
(1994)
Cell
, vol.77
, pp. 1-20
-
-
Matthews, D.A.1
Worland, S.2
-
2
-
-
0028567137
-
Molecular evolution and domain structure of plasminogen-related growth factors (HGF/S and HGF1/MSP)
-
Donate, L.E., Gherardi, E., Srinivasan, N., Sowdhamini, R., Aparicio, S. & Blundell, T.L. (1994). Molecular evolution and domain structure of plasminogen-related growth factors (HGF/S and HGF1/MSP). Protein Sci. 3, 2378-2394.
-
(1994)
Protein Sci.
, vol.3
, pp. 2378-2394
-
-
Donate, L.E.1
Gherardi, E.2
Srinivasan, N.3
Sowdhamini, R.4
Aparicio, S.5
Blundell, T.L.6
-
3
-
-
0027050011
-
Sequence-structure matching in globular proteins: Application to supersecondary and tertiary structure determination
-
Godzik, A. & Skolnick, J. (1992). Sequence-structure matching in globular proteins: application to supersecondary and tertiary structure determination. Proc. Natl Acad. Sci. USA 89, 12098-12102.
-
(1992)
Proc. Natl Acad. Sci. USA
, vol.89
, pp. 12098-12102
-
-
Godzik, A.1
Skolnick, J.2
-
4
-
-
0030067191
-
Assigning amino acid sequences to 3-dimensional protein folds
-
Fischer, D., Rice, D., Bowie, J.U. & Eisenberg, D. (1996). Assigning amino acid sequences to 3-dimensional protein folds. FASEB J. 10, 126-136.
-
(1996)
FASEB J.
, vol.10
, pp. 126-136
-
-
Fischer, D.1
Rice, D.2
Bowie, J.U.3
Eisenberg, D.4
-
6
-
-
0025183708
-
Basic local alignment search tool
-
Altschul, S.F., Gish, W., Miller, W., Myers, E.W. & Lipman, D.J. (1990). Basic local alignment search tool. J. Mol. Biol. 215, 403-410.
-
(1990)
J. Mol. Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
7
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S.F., et al., & Lipman, D.J. (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25, 3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Lipman, D.J.2
-
8
-
-
0023989064
-
Improved tools for biological sequence comparison
-
Pearson, W.R. & Lipman, D.J. (1988). Improved tools for biological sequence comparison. Proc. Natl Acad. Sci. USA 85, 2444-2448.
-
(1988)
Proc. Natl Acad. Sci. USA
, vol.85
, pp. 2444-2448
-
-
Pearson, W.R.1
Lipman, D.J.2
-
9
-
-
0010612316
-
-
Biocomputing Research Unit, University of Edinburgh, Edinburgh
-
Sturrock, S.S. & Colins, J.F. (1993). MPsrch version 1.3. Biocomputing Research Unit, University of Edinburgh, Edinburgh.
-
(1993)
MPsrch Version 1.3
-
-
Sturrock, S.S.1
Colins, J.F.2
-
10
-
-
0029916915
-
The PROSITE database, its status in 1995
-
Bairoch, A. Bucher, P. & Hofmann, K. (1995). The PROSITE database, its status in 1995. Nucleic Acids Res. 24, 189-196.
-
(1995)
Nucleic Acids Res.
, vol.24
, pp. 189-196
-
-
Bairoch, A.1
Bucher, P.2
Hofmann, K.3
-
11
-
-
0026410103
-
Automated assembly of protein blocks for database searching
-
Henikoff, S. & Henikoff, J.G. (1991). Automated assembly of protein blocks for database searching. Nucleic Acids Res. 19, 6565-6572.
-
(1991)
Nucleic Acids Res.
, vol.19
, pp. 6565-6572
-
-
Henikoff, S.1
Henikoff, J.G.2
-
12
-
-
0028246722
-
PRINTS - A protein motif fingerprint database
-
Attwood, T.K. & Beck, M.E. (1994). PRINTS - a protein motif fingerprint database. Protein Eng. 7, 841-848.
-
(1994)
Protein Eng.
, vol.7
, pp. 841-848
-
-
Attwood, T.K.1
Beck, M.E.2
-
13
-
-
0030752032
-
Novel developments with the PRINTS protein fingerprint database
-
Attwood, T.K., Beck, M.E., Bleasby, A.J. Degtyaranko, K., Michie, A.D. & Parry-Smith, D.J. (1997). Novel developments with the PRINTS protein fingerprint database. Nucleic Acids Res. 25, 212-217.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 212-217
-
-
Attwood, T.K.1
Beck, M.E.2
Bleasby, A.J.3
Degtyaranko, K.4
Michie, A.D.5
Parry-Smith, D.J.6
-
14
-
-
0032483312
-
Method for prediction of protein function from sequence using the sequence-to-structure-to-function paradigm with application to glutaredoxins/thioredoxins and T1 ribonucleases
-
Fetrow, J.S. & Skolnick, J. (1998). Method for prediction of protein function from sequence using the sequence-to-structure-to-function paradigm with application to glutaredoxins/thioredoxins and T1 ribonucleases. J. Mol. Biol. 281, 949-968.
-
(1998)
J. Mol. Biol.
, vol.281
, pp. 949-968
-
-
Fetrow, J.S.1
Skolnick, J.2
-
15
-
-
0030874881
-
Upases and alpha/beta hydrolase fold
-
Schrag, J.D. & Cygler, M. (1997). Upases and alpha/beta hydrolase fold. Methods Enzymol. 284, 85-107.
-
(1997)
Methods Enzymol.
, vol.284
, pp. 85-107
-
-
Schrag, J.D.1
Cygler, M.2
-
16
-
-
0026540411
-
The α/β hydrolase fold
-
Ollis, D.L, et al., & Goldman, A. (1992). The α/β hydrolase fold. Protein Eng. 5, 197-211.
-
(1992)
Protein Eng.
, vol.5
, pp. 197-211
-
-
Ollis, D.L.1
Goldman, A.2
-
17
-
-
0031866670
-
aCHEdb: The database system for ESTHER, α/β fold family of proteins and the cholinesterase gene server
-
Cousin, X., Hotelier, T., Giles, K., Toutant, J.P. & Chatonnet, A. (1998). aCHEdb: the database system for ESTHER, α/β fold family of proteins and the cholinesterase gene server. Nucleic Acids Res. 26, 226-228.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 226-228
-
-
Cousin, X.1
Hotelier, T.2
Giles, K.3
Toutant, J.P.4
Chatonnet, A.5
-
18
-
-
0025778840
-
Atomic structure of acetylcholinesterase from Torpedo californica: A prototypic acetylcholine-binding protein
-
Sussman, J.L., et al., & Silman, I. (1991). Atomic structure of acetylcholinesterase from Torpedo californica: a prototypic acetylcholine-binding protein. Science 253, 872-879.
-
(1991)
Science
, vol.253
, pp. 872-879
-
-
Sussman, J.L.1
Silman, I.2
-
19
-
-
0030589190
-
A pancreatic lipase with a phospholipase A1 activity: Crystal structure of a chimeric pancreatic lipase-related protein 2 from guinea pig
-
Withers-Martinez, C., Carriere, F., Verger, R., Bourgeois, D. & Cambillau, C. (1996). A pancreatic lipase with a phospholipase A1 activity: crystal structure of a chimeric pancreatic lipase-related protein 2 from guinea pig. Structure 4, 1363-1374.
-
(1996)
Structure
, vol.4
, pp. 1363-1374
-
-
Withers-Martinez, C.1
Carriere, F.2
Verger, R.3
Bourgeois, D.4
Cambillau, C.5
-
20
-
-
0030765455
-
Dali/FSSP classification of three-dimensional protein folds
-
Holm, L. & Sander, C. (1997). Dali/FSSP classification of three-dimensional protein folds. Nucleic Acids Res. 25, 231-234.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 231-234
-
-
Holm, L.1
Sander, C.2
-
21
-
-
0030586027
-
Mechanism of cyanogenesis: The crystal structure of hydroxynitrile lyase from Hevea brasiliensis
-
Wagner, U.G., Hasslacher, M., Griengl, H., Schwab, H. & Kratky, C. (1996). Mechanism of cyanogenesis: the crystal structure of hydroxynitrile lyase from Hevea brasiliensis. Structure 4, 811-822.
-
(1996)
Structure
, vol.4
, pp. 811-822
-
-
Wagner, U.G.1
Hasslacher, M.2
Griengl, H.3
Schwab, H.4
Kratky, C.5
-
22
-
-
0025734772
-
Crystal structure of haloalkane dehalogenase: An enzyme to detoxify halogenated alkanes
-
Franken, S.M., Rozeboom, HJ., Kalk, K.H. & Dijkstra, B.W. (1991). Crystal structure of haloalkane dehalogenase: an enzyme to detoxify halogenated alkanes. EMBO J. 10, 1297-1302.
-
(1991)
EMBO J.
, vol.10
, pp. 1297-1302
-
-
Franken, S.M.1
Rozeboom, H.J.2
Kalk, K.H.3
Dijkstra, B.W.4
-
23
-
-
0031746105
-
Fold prediction by a hierarchy of sequence, threading, and modeling methods
-
Jaroszewski, L., Rychlewski, L., Zhang, B. & Godzik, A. (1998). Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 7, 1431-1440.
-
(1998)
Protein Sci.
, vol.7
, pp. 1431-1440
-
-
Jaroszewski, L.1
Rychlewski, L.2
Zhang, B.3
Godzik, A.4
-
24
-
-
15444350252
-
The complete genome sequence of Escherichia coli K-12
-
Blattner, F.R., et al., & Shao, Y. (1997). The complete genome sequence of Escherichia coli K-12. Science 277, 1453-1474.
-
(1997)
Science
, vol.277
, pp. 1453-1474
-
-
Blattner, F.R.1
Shao, Y.2
-
25
-
-
0028483211
-
The metal-ion-free oxidoreductase from Streptomyces aureofaciens has an α/β hydrolase fold
-
Hecht, H.J., Sobek, H., Haag, T., Reifer, O. & van Pee, K.-H. (1994). The metal-ion-free oxidoreductase from Streptomyces aureofaciens has an α/β hydrolase fold. Nat. Struct. Biol. 1, 532-537.
-
(1994)
Nat. Struct. Biol.
, vol.1
, pp. 532-537
-
-
Hecht, H.J.1
Sobek, H.2
Haag, T.3
Reifer, O.4
Van Pee, K.-H.5
-
26
-
-
0030800827
-
Identification of important motifs in protein sequences: Program MULTIM and its applications to lipase-related sequences
-
Petersen, S.B., Drablos, F., Petersen, M.T. & Petersen, E.I. (1997). Identification of important motifs in protein sequences: program MULTIM and its applications to lipase-related sequences. Methods Enzymol. 284, 61-85.
-
(1997)
Methods Enzymol.
, vol.284
, pp. 61-85
-
-
Petersen, S.B.1
Drablos, F.2
Petersen, M.T.3
Petersen, E.I.4
-
27
-
-
0029973830
-
Derivation of 3-D coordinate templates for searching structural databases: Application to Ser-His-Asp catalytic triads in the serine proteinases and upases
-
Wallace, A.C., Laskowski, R.A. & Thornton, J.M. (1996). Derivation of 3-D coordinate templates for searching structural databases: application to Ser-His-Asp catalytic triads in the serine proteinases and upases. Protein Sci. 5, 1001-1013.
-
(1996)
Protein Sci.
, vol.5
, pp. 1001-1013
-
-
Wallace, A.C.1
Laskowski, R.A.2
Thornton, J.M.3
-
28
-
-
0030724039
-
TESS: A geometric hashing algorithm for deriving 3D coordinate templates for searching structural databases. Application to enzyme active sites
-
Wallace, A.C., Borkakoti, N. & Thornton, J.M. (1997). TESS: a geometric hashing algorithm for deriving 3D coordinate templates for searching structural databases. Application to enzyme active sites. Protein Sci. 6, 2308-2323.
-
(1997)
Protein Sci.
, vol.6
, pp. 2308-2323
-
-
Wallace, A.C.1
Borkakoti, N.2
Thornton, J.M.3
-
29
-
-
0029046744
-
An assessment of amino acid exchange matrices in aligning protein sequences: The twilight zone revisited
-
Vogt, G., Etzold, T. & Argos, P. (1995). An assessment of amino acid exchange matrices in aligning protein sequences: the twilight zone revisited. J. Mol. Biol. 249, 816-831.
-
(1995)
J. Mol. Biol.
, vol.249
, pp. 816-831
-
-
Vogt, G.1
Etzold, T.2
Argos, P.3
-
30
-
-
0028914722
-
Structural basis of substrate specificity in the serine proteases
-
Perona, J.J. & Craik, C.S. (1995). Structural basis of substrate specificity in the serine proteases. Protein Sci. 4, 337-360.
-
(1995)
Protein Sci.
, vol.4
, pp. 337-360
-
-
Perona, J.J.1
Craik, C.S.2
-
31
-
-
0030470263
-
Dynamics of Fusarium solani cutinase investigated through structural comparison among different crystal forms of its variants
-
Longhi, S., et al., & Cambillau, C. (1996). Dynamics of Fusarium solani cutinase investigated through structural comparison among different crystal forms of its variants. Proteins 26, 442-458.
-
(1996)
Proteins
, vol.26
, pp. 442-458
-
-
Longhi, S.1
Cambillau, C.2
-
32
-
-
0026244229
-
MOLSCRIPT, a program to produce both detailed and schematic plots of protein structures
-
Kraulis, P.J. (1991). MOLSCRIPT, a program to produce both detailed and schematic plots of protein structures. J. Appl. Crystallogr. 24, 946-950.
-
(1991)
J. Appl. Crystallogr.
, vol.24
, pp. 946-950
-
-
Kraulis, P.J.1
-
33
-
-
0030610593
-
Crystal structure of Kex1deltap, a prohormone-processing carboxypeptidase from Saccharomyces cerevisiae
-
Shilton, B.H., Thomas, D.Y. & Cygler, M. (1997). Crystal structure of Kex1deltap, a prohormone-processing carboxypeptidase from Saccharomyces cerevisiae. Biochemistry 36, 9002-9012.
-
(1997)
Biochemistry
, vol.36
, pp. 9002-9012
-
-
Shilton, B.H.1
Thomas, D.Y.2
Cygler, M.3
-
34
-
-
0031574909
-
Atomic resolution (1.0 Å) crystal structure of Fusarium solani cutinase: Stereochemical analysis
-
Longhi, S., Czjzek, M., Lamzin, V., Nicolas, A. & Cambillau, C. (1997). Atomic resolution (1.0 Å) crystal structure of Fusarium solani cutinase: stereochemical analysis. J. Mol. Biol. 268, 779-799.
-
(1997)
J. Mol. Biol.
, vol.268
, pp. 779-799
-
-
Longhi, S.1
Czjzek, M.2
Lamzin, V.3
Nicolas, A.4
Cambillau, C.5
-
35
-
-
0030596528
-
Crystal structure of a bacterial lipase from Chromobacterium viscosum ATCC 6918 refined at 1.6 angstroms resolution
-
Lang, D., et al., & Schomburg, D. (1996). Crystal structure of a bacterial lipase from Chromobacterium viscosum ATCC 6918 refined at 1.6 angstroms resolution. J. Mol. Biol. 259, 704-717.
-
(1996)
J. Mol. Biol.
, vol.259
, pp. 704-717
-
-
Lang, D.1
Schomburg, D.2
-
36
-
-
0025160881
-
Refined structure of dienelactone hydrolase at 1.8 Å
-
Pathak, D. & Ollis, D.L. (1990). Refined structure of dienelactone hydrolase at 1.8 Å. J. Mol. Biol. 214, 497-525.
-
(1990)
J. Mol. Biol.
, vol.214
, pp. 497-525
-
-
Pathak, D.1
Ollis, D.L.2
-
37
-
-
0024278449
-
Crystallization of haloalkane dehalogenase from Xanthobacter autotrophicus GJ10
-
Rozeboom, H.J., Kingma, J., Janssen, D.B. & Dijkstra, B.W. (1988). Crystallization of haloalkane dehalogenase from Xanthobacter autotrophicus GJ10. J. Mol. Biol. 200, 611-612.
-
(1988)
J. Mol. Biol.
, vol.200
, pp. 611-612
-
-
Rozeboom, H.J.1
Kingma, J.2
Janssen, D.B.3
Dijkstra, B.W.4
-
38
-
-
0028773288
-
The sequence, crystal structure determination and refinement of two crystal forms of lipase B from Candida antarctica
-
Uppenberg, J., Hansen, MX, Patkar, S. & Jones, T.A. (1994). The sequence, crystal structure determination and refinement of two crystal forms of lipase B from Candida antarctica. Structure 2, 293-308.
-
(1994)
Structure
, vol.2
, pp. 293-308
-
-
Uppenberg, J.1
Hansen, M.X.2
Patkar, S.3
Jones, T.A.4
-
39
-
-
0028141817
-
Structure of a myristoyl-ACP-specific thioesterase from Vibrio harveyi
-
Lawson, D.M., et al., & Derewenda, Z.S. (1994). Structure of a myristoyl-ACP-specific thioesterase from Vibrio harveyi. Biochemistry 33, 9382-9388.
-
(1994)
Biochemistry
, vol.33
, pp. 9382-9388
-
-
Lawson, D.M.1
Derewenda, Z.S.2
-
40
-
-
0031015343
-
Structure of acetylcholinesterase complexed with the nootropic alkaloid, (-)-huperzine a
-
Raves, M.L., Harel, M., Pang, Y.P., Silman, I., Kozikowski, A.P. & Sussman, J.L. (1997). Structure of acetylcholinesterase complexed with the nootropic alkaloid, (-)-huperzine A. Nat. Struct Biol. 4, 57-63.
-
(1997)
Nat. Struct Biol.
, vol.4
, pp. 57-63
-
-
Raves, M.L.1
Harel, M.2
Pang, Y.P.3
Silman, I.4
Kozikowski, A.P.5
Sussman, J.L.6
-
41
-
-
0026786234
-
The crystal and molecular structure of the Rhizomucor miehei triacylglyceride lipase at 1.9 A resolution
-
Derewenda, Z.S., Derewenda, U. & Dodson, G.G. (1992). The crystal and molecular structure of the Rhizomucor miehei triacylglyceride lipase at 1.9 A resolution. J. Mol. Biol. 227, 818-839.
-
(1992)
J. Mol. Biol.
, vol.227
, pp. 818-839
-
-
Derewenda, Z.S.1
Derewenda, U.2
Dodson, G.G.3
-
42
-
-
0029645906
-
Three-dimensional structure of the human 'protective protein': Structure of the precursor form suggests a complex activation mechanism
-
Rudenko, G., Bonten, E., d'Azzo, A. & Hol, W.G. (1995). Three-dimensional structure of the human 'protective protein': structure of the precursor form suggests a complex activation mechanism. Structure 3, 1249-1259.
-
(1995)
Structure
, vol.3
, pp. 1249-1259
-
-
Rudenko, G.1
Bonten, E.2
D'Azzo, A.3
Hol, W.G.4
|