-
1
-
-
0027967593
-
Graphtheoretic approach to the identification of three-dimensional amino acid side-chains in protein structures
-
Artymiuk PJ, Poirrette AR, Grindley HM, Rice DW, Willett P. 1994. Graphtheoretic approach to the identification of three-dimensional amino acid side-chains in protein structures. J Mol Biol 243:327-344.
-
(1994)
J Mol Biol
, vol.243
, pp. 327-344
-
-
Artymiuk, P.J.1
Poirrette, A.R.2
Grindley, H.M.3
Rice, D.W.4
Willett, P.5
-
3
-
-
0000913086
-
A fast algorithm for rendering space-filling molecular pictures
-
Bacon DJ, Anderson WF. 1988. A fast algorithm for rendering space-filling molecular pictures. J Mol Graph 6:219-220.
-
(1988)
J Mol Graph
, vol.6
, pp. 219-220
-
-
Bacon, D.J.1
Anderson, W.F.2
-
4
-
-
0028071564
-
The SWISS-PROT protein sequence data bank: Current status
-
Bairoch A, Boeckmann B. 1994. The SWISS-PROT protein sequence data bank: Current status. Nucleic Acids Res 22:3578-3580.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 3578-3580
-
-
Bairoch, A.1
Boeckmann, B.2
-
5
-
-
0028111863
-
PROSITE: Recent developments
-
Bairoch A, Bucher P. 1994. PROSITE: Recent developments. Nucleic Acids Res 22:3583-3589.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 3583-3589
-
-
Bairoch, A.1
Bucher, P.2
-
6
-
-
0027972854
-
Classification of serine proteases derived from steric comparisons of their active site geometry, part II: Ser, His, Asp arrangements in proteolytic and non-proteolytic proteins
-
Barth A, Frost K, Wahab M, Brandt W, Schlader HD, Franke R. 1994. Classification of serine proteases derived from steric comparisons of their active site geometry, part II: Ser, His, Asp arrangements in proteolytic and non-proteolytic proteins. Drug Design and Discovery 12:89-111.
-
(1994)
Drug Design and Discovery
, vol.12
, pp. 89-111
-
-
Barth, A.1
Frost, K.2
Wahab, M.3
Brandt, W.4
Schlader, H.D.5
Franke, R.6
-
7
-
-
0027772480
-
Classification of serine proteases derived from steric comparisons of their active sites
-
Barth A, Wahab M, Brandt W, Frost K. 1993. Classification of serine proteases derived from steric comparisons of their active sites. Drug Design and Discovery 10:297-317.
-
(1993)
Drug Design and Discovery
, vol.10
, pp. 297-317
-
-
Barth, A.1
Wahab, M.2
Brandt, W.3
Frost, K.4
-
8
-
-
0017411710
-
The Protein Data Bank: A computer-based archival file for macromolecular structures
-
Bernstein FC, Koetzle TF, Williams GJB, Mejer EF Jr, Brice MD, Rodgers JR, Kennard O, Shimanouchi T, Tasumi M. 1977. The Protein Data Bank: A computer-based archival file for macromolecular structures. J Mol Biol 112:535-542.
-
(1977)
J Mol Biol
, vol.112
, pp. 535-542
-
-
Bernstein, F.C.1
Koetzle, T.F.2
Williams, G.J.B.3
Mejer Jr., E.F.4
Brice, M.D.5
Rodgers, J.R.6
Kennard, O.7
Shimanouchi, T.8
Tasumi, M.9
-
9
-
-
0003450992
-
-
Nomenclature Committee of the International Union of Biochemistry. London: Academic Press
-
Bielka H, Dixon HBF, Karlson P, Liebecq C, Sharon N, Van Lenten EJ, Velick SF, Vliegenthart JFG, Webb EC 1992. E. C. Enzyme Nomenclature 1992: Recommendations of the Nomenclature Committee of the International Union of Biochemistry and Molecular Biology on the nomenclature and classification of enzymes. Nomenclature Committee of the International Union of Biochemistry. London: Academic Press.
-
(1992)
E. C. Enzyme Nomenclature 1992: Recommendations of the Nomenclature Committee of the International Union of Biochemistry and Molecular Biology on the Nomenclature and Classification of Enzymes
-
-
Bielka, H.1
Dixon, H.B.F.2
Karlson, P.3
Liebecq, C.4
Sharon, N.5
Van Lenten, E.J.6
Velick, S.F.7
Vliegenthart, J.F.G.8
Webb, E.C.9
-
10
-
-
33847799412
-
Structure and mechanism of chymotrypsin
-
Blow DM. 1976. Structure and mechanism of chymotrypsin. Acc Chem Res 9:145-152.
-
(1976)
Acc Chem Res
, vol.9
, pp. 145-152
-
-
Blow, D.M.1
-
11
-
-
85021471503
-
More of the catalytic triad
-
Blow DM. 1990. More of the catalytic triad. Nature 221:331-340.
-
(1990)
Nature
, vol.221
, pp. 331-340
-
-
Blow, D.M.1
-
12
-
-
0014689979
-
Role of a buried acid group in the mechanism of action of chymotrypsin
-
Blow DM, Birktoft JJ, Hartley BS. 1969. Role of a buried acid group in the mechanism of action of chymotrypsin. Nature 221:337-340.
-
(1969)
Nature
, vol.221
, pp. 337-340
-
-
Blow, D.M.1
Birktoft, J.J.2
Hartley, B.S.3
-
13
-
-
0026314939
-
Structural basis for broad specificity in α-lytic protease mutants
-
Bone R, Fujishige A, Kettner CA, Agard DA. 1991. Structural basis for broad specificity in α-lytic protease mutants. Biochemistry 30:10388-10398.
-
(1991)
Biochemistry
, vol.30
, pp. 10388-10398
-
-
Bone, R.1
Fujishige, A.2
Kettner, C.A.3
Agard, D.A.4
-
14
-
-
0025057072
-
A serine protease triad forms the catalytic centre of triacylglycerol lipase
-
Brady L, Brzozowski AM, Derewenda ZS, Dodson E, Dodson G, Tolley S, Turkenburg JP, Christianson L, Huge Jensen B, Norskov L, Thim L, Menge U. 1990. A serine protease triad forms the catalytic centre of triacylglycerol lipase. Nature 343:767-770.
-
(1990)
Nature
, vol.343
, pp. 767-770
-
-
Brady, L.1
Brzozowski, A.M.2
Derewenda, Z.S.3
Dodson, E.4
Dodson, G.5
Tolley, S.6
Turkenburg, J.P.7
Christianson, L.8
Huge Jensen, B.9
Norskov, L.10
Thim, L.11
Menge, U.12
-
15
-
-
0026418174
-
A model for interfacial activation in lipases from the structure of a fungal lipase-inhibitor complex
-
Brzozowski AM, Derewenda U, Derewenda ZS, Dodson GG, Lawson DM, Turkenburg JP, Bjorkling F, Huge Jensen B, Patkar SA, Thim L. 1991. A model for interfacial activation in lipases from the structure of a fungal lipase-inhibitor complex. Nature 351:491-497.
-
(1991)
Nature
, vol.351
, pp. 491-497
-
-
Brzozowski, A.M.1
Derewenda, U.2
Derewenda, Z.S.3
Dodson, G.G.4
Lawson, D.M.5
Turkenburg, J.P.6
Bjorkling, F.7
Huge Jensen, B.8
Patkar, S.A.9
Thim, L.10
-
16
-
-
11944273044
-
An alternative geometry for the catalytic triad of serine proteases
-
Corey DR, McGrath ME, Vasquez JR, Fletterick RJ, Craik CS. 1992. An alternative geometry for the catalytic triad of serine proteases. J Am Chem Soc 114:4905-4907.
-
(1992)
J Am Chem Soc
, vol.114
, pp. 4905-4907
-
-
Corey, D.R.1
McGrath, M.E.2
Vasquez, J.R.3
Fletterick, R.J.4
Craik, C.S.5
-
17
-
-
0026550733
-
Catalysis at the interface: The anatomy of a conformational change in a triglyceride lipase
-
Derewenda U, Brzozowski AM, Lawson DM, Derewenda ZS. 1992. Catalysis at the interface: The anatomy of a conformational change in a triglyceride lipase. Biochemistry 31:1532-1541.
-
(1992)
Biochemistry
, vol.31
, pp. 1532-1541
-
-
Derewenda, U.1
Brzozowski, A.M.2
Lawson, D.M.3
Derewenda, Z.S.4
-
18
-
-
0028230909
-
Three-dimensional, sequence order-independent comparison of a serine protease against the crystallographic database reveals active site similarities: Potential implications to evolution and to protein folding
-
Fischer D, Wolfson H, Lin SL, Nussinov R. 1994. Three-dimensional, sequence order-independent comparison of a serine protease against the crystallographic database reveals active site similarities: Potential implications to evolution and to protein folding. Protein Sci 5:769-778.
-
(1994)
Protein Sci
, vol.5
, pp. 769-778
-
-
Fischer, D.1
Wolfson, H.2
Lin, S.L.3
Nussinov, R.4
-
19
-
-
0023198896
-
Crystal and molecular structures of the complex of α-chymotrypsin with its inhibitor turkey ovomucoid domain at 18 Å resolution
-
Fujinaga M, Sielecki AR, Read RJ, Ardelt W, Laskowski M, James MNG. 1987. Crystal and molecular structures of the complex of α-chymotrypsin with its inhibitor turkey ovomucoid domain at 18 Å resolution. J Mol Biol 195:397-418.
-
(1987)
J Mol Biol
, vol.195
, pp. 397-418
-
-
Fujinaga, M.1
Sielecki, A.R.2
Read, R.J.3
Ardelt, W.4
Laskowski, M.5
James, M.N.G.6
-
20
-
-
0026410002
-
Structural aspects of metal liganding to functional groups in proteins
-
Glusker JP. 1991. Structural aspects of metal liganding to functional groups in proteins. Adv Protein Chem 42:1-16.
-
(1991)
Adv Protein Chem
, vol.42
, pp. 1-16
-
-
Glusker, J.P.1
-
21
-
-
0015719893
-
Serine at the active center of yeast carboxypeptidase II
-
Hayashi R, Moore S, Stein WH. 1973. Serine at the active center of yeast carboxypeptidase II. J Biol Chem 245:8366-8369.
-
(1973)
J Biol Chem
, vol.245
, pp. 8366-8369
-
-
Hayashi, R.1
Moore, S.2
Stein, W.H.3
-
22
-
-
0024498374
-
The elucidation of protein function by sequence motif analysis
-
Hodgman TC. 1989. The elucidation of protein function by sequence motif analysis CABIOS 5:1-13.
-
(1989)
CABIOS
, vol.5
, pp. 1-13
-
-
Hodgman, T.C.1
-
23
-
-
0028330140
-
Characterization of interactions and metal-ion binding-sites in proteins
-
Jernigan R, Raghunathan G, Bahar I. 1994. Characterization of interactions and metal-ion binding-sites in proteins. Curr Opin Struct Biol 4:256-263.
-
(1994)
Curr Opin Struct Biol
, vol.4
, pp. 256-263
-
-
Jernigan, R.1
Raghunathan, G.2
Bahar, I.3
-
24
-
-
0026619463
-
Similarities and differences between human cyclophilin A and other β-barrel structures
-
Ke H. 1992. Similarities and differences between human cyclophilin A and other β-barrel structures. J Mol Biol 225:539-550.
-
(1992)
J Mol Biol
, vol.225
, pp. 539-550
-
-
Ke, H.1
-
25
-
-
0026244229
-
MOLSCRIPT: A program to produce both detailed and schematic plots of protein structures
-
Kraulis PJ. 1991. MOLSCRIPT: A program to produce both detailed and schematic plots of protein structures. J Appl Crystallogr 24:946-950.
-
(1991)
J Appl Crystallogr
, vol.24
, pp. 946-950
-
-
Kraulis, P.J.1
-
26
-
-
0026787333
-
Refined atomic model of wheat serine carboxypeptidase II at 22 Å resolution
-
Liao DI, Breddam K, Sweet R, Bullock T, Remington SJ. 1992. Refined atomic model of wheat serine carboxypeptidase II at 22 Å resolution. Biochemistry 31:9796-9812.
-
(1992)
Biochemistry
, vol.31
, pp. 9796-9812
-
-
Liao, D.I.1
Breddam, K.2
Sweet, R.3
Bullock, T.4
Remington, S.J.5
-
27
-
-
0000064504
-
The assembly of blood dotting complexes on membranes
-
Mann KG. 1987. The assembly of blood dotting complexes on membranes. Trends Biochem Sci 12:229-233.
-
(1987)
Trends Biochem Sci
, vol.12
, pp. 229-233
-
-
Mann, K.G.1
-
28
-
-
0019119230
-
Crystallographic refinement and atomic models of the intact immunoglobulin molecule kol and its antigen-binding fragment at 30 Å and 19 Å resolution
-
Marquait M, Deisenhofer J, Huber R, Palm W. 1980. Crystallographic refinement and atomic models of the intact immunoglobulin molecule kol and its antigen-binding fragment at 30 Å and 19 Å resolution. J Mol Biol 141:369-391.
-
(1980)
J Mol Biol
, vol.141
, pp. 369-391
-
-
Marquait, M.1
Deisenhofer, J.2
Huber, R.3
Palm, W.4
-
29
-
-
0026642662
-
Perturbing the polar environment of Asp 102 in trypsin: Consequences of replacing the conserved Ser 214
-
McGrath ME, Vasquez JR, Craik CS, Yahg AS, Honig B, Fletterick RJ. 1992. Perturbing the polar environment of Asp 102 in trypsin: Consequences of replacing the conserved Ser 214. Biochemistry 31:3059-3064.
-
(1992)
Biochemistry
, vol.31
, pp. 3059-3064
-
-
McGrath, M.E.1
Vasquez, J.R.2
Craik, C.S.3
Yahg, A.S.4
Honig, B.5
Fletterick, R.J.6
-
30
-
-
0028057108
-
Raster3D version 2.0: A program for photorealistic molecular graphics
-
Merritt EA, Murphy MEP. 1994. Raster3D version 2.0: A program for photorealistic molecular graphics. Acta Crystallogr D 50:869-873.
-
(1994)
Acta Crystallogr D
, vol.50
, pp. 869-873
-
-
Merritt, E.A.1
Murphy, M.E.P.2
-
31
-
-
0028961335
-
SCOP: A structural classification of proteins database for the investigation of sequences and structures
-
Murzin AG, Brenner SE, Hubbard T, Chothia C. 1995. SCOP: A structural classification of proteins database for the investigation of sequences and structures. J Mol Biol 247:536-540.
-
(1995)
J Mol Biol
, vol.247
, pp. 536-540
-
-
Murzin, A.G.1
Brenner, S.E.2
Hubbard, T.3
Chothia, C.4
-
32
-
-
0027435346
-
The crystal structure of triacylglycerol lipase from Pseudomonas glumae reveals a partially redundant catalytic aspartate
-
Noble MEM, Cleasby A, Johnson LN, Egmond MR, Frenken LGJ. 1993. The crystal structure of triacylglycerol lipase from Pseudomonas glumae reveals a partially redundant catalytic aspartate. FEBS Lett 331:123-128.
-
(1993)
FEBS Lett
, vol.331
, pp. 123-128
-
-
Noble, M.E.M.1
Cleasby, A.2
Johnson, L.N.3
Egmond, M.R.4
Frenken, L.G.J.5
-
33
-
-
0026540411
-
The α/β hydrolase fold
-
Ollis D, Cheah E, Cygler M, Dijkstra B, Frolow F, Franken SM, Harel M, Remington SJ, Silman I, Schrag J, Sussman JL, Verschueren KHG, Goldman A. 1992. The α/β hydrolase fold. Protein Eng 5:197-211.
-
(1992)
Protein Eng
, vol.5
, pp. 197-211
-
-
Ollis, D.1
Cheah, E.2
Cygler, M.3
Dijkstra, B.4
Frolow, F.5
Franken, S.M.6
Harel, M.7
Remington, S.J.8
Silman, I.9
Schrag, J.10
Sussman, J.L.11
Verschueren, K.H.G.12
Goldman, A.13
-
35
-
-
0028914722
-
Structural basis of substrate specificity in the serine proteases
-
Perona J, Craik C. 1995. Structural basis of substrate specificity in the serine proteases. Protein Sci 4:337-360.
-
(1995)
Protein Sci
, vol.4
, pp. 337-360
-
-
Perona, J.1
Craik, C.2
-
36
-
-
0026432669
-
Ser-His-Glu triad forms the catalytic site of the lipase from Geotrichum candidum
-
Schrag JD, Yungi Li, Shan Wu, Miroslaw C. 1991. Ser-His-Glu triad forms the catalytic site of the lipase from Geotrichum candidum. Nature 351:761-764.
-
(1991)
Nature
, vol.351
, pp. 761-764
-
-
Schrag, J.D.1
Li, Y.2
Wu, S.3
Miroslaw, C.4
-
37
-
-
0025778840
-
Atomic structure of acetylcholinesterase from Torpedo californica: A prototypic acetylcholine-binding protein
-
Sussman JL, Harel M, Frolow F, Oefner C, Goldman A, Toker L, Silman I. 1991. Atomic structure of acetylcholinesterase from Torpedo californica: A prototypic acetylcholine-binding protein. Science 255:872-879.
-
(1991)
Science
, vol.255
, pp. 872-879
-
-
Sussman, J.L.1
Harel, M.2
Frolow, F.3
Oefner, C.4
Goldman, A.5
Toker, L.6
Silman, I.7
-
38
-
-
0025812630
-
The refined crystal structure of the complex of subtilism and Streptomyces subtilisin inhibitor at 18 Å resolution
-
Takeuchi Y, Satow Y, Nakamura KT, Mitsui Y. 1991. The refined crystal structure of the complex of subtilism and Streptomyces subtilisin inhibitor at 18 Å resolution. J Mol Biol 221:309-325.
-
(1991)
J Mol Biol
, vol.221
, pp. 309-325
-
-
Takeuchi, Y.1
Satow, Y.2
Nakamura, K.T.3
Mitsui, Y.4
-
39
-
-
0024046573
-
Pattern matching in protein sequence comparison and structure prediction
-
Taylor WR. 1988. Pattern matching in protein sequence comparison and structure prediction. Protein Eng 2:77-86.
-
(1988)
Protein Eng
, vol.2
, pp. 77-86
-
-
Taylor, W.R.1
-
40
-
-
3142625286
-
Templates, consensus patterns and motifs
-
Taylor WR, Jones DT. 1991. Templates, consensus patterns and motifs. Curr Opin Struct Biol 1:327-323.
-
(1991)
Curr Opin Struct Biol
, vol.1
, pp. 327-1323
-
-
Taylor, W.R.1
Jones, D.T.2
-
41
-
-
0028936579
-
A novel variant of the catalytic triad in the Streptomyces scabies esterase
-
Wei Y, Schottel JL, Derewenda U, Swenson L, Patkar S, Derewenda ZS. 1995. A novel variant of the catalytic triad in the Streptomyces scabies esterase. Nature Struct Biol 2:218-223.
-
(1995)
Nature Struct Biol
, vol.2
, pp. 218-223
-
-
Wei, Y.1
Schottel, J.L.2
Derewenda, U.3
Swenson, L.4
Patkar, S.5
Derewenda, Z.S.6
-
42
-
-
0014682668
-
Structure of subtilsm bpn at 25 Å resolution
-
Wright CS, Alden RA, Kraut J. 1969. Structure of subtilsm bpn at 25 Å resolution. Nature 227:235-242.
-
(1969)
Nature
, vol.227
, pp. 235-242
-
-
Wright, C.S.1
Alden, R.A.2
Kraut, J.3
|