메뉴 건너뛰기




Volumn 48, Issue 2, 1998, Pages 94-103

Ribozyme engineering and early evolution

Author keywords

[No Author keywords available]

Indexed keywords


EID: 0031953162     PISSN: 00063568     EISSN: None     Source Type: Journal    
DOI: 10.2307/1313134     Document Type: Article
Times cited : (30)

References (70)
  • 1
    • 0027488624 scopus 로고
    • Isolation of new ribozymes from a large pool of random sequences
    • Bartel DP, Szostak JW. 1993. Isolation of new ribozymes from a large pool of random sequences. Science 261: 1411-1418.
    • (1993) Science , vol.261 , pp. 1411-1418
    • Bartel, D.P.1    Szostak, J.W.2
  • 2
    • 0026649231 scopus 로고
    • Directed evolution of an RNA enzyme
    • Beaudry AA, Joyce GF. 1992. Directed evolution of an RNA enzyme. Science 257: 635-641.
    • (1992) Science , vol.257 , pp. 635-641
    • Beaudry, A.A.1    Joyce, G.F.2
  • 3
    • 0001858588 scopus 로고
    • Reading the Palimpsest: Contemporary biochemical data and the RNA world
    • Gesteland RF, Atkins JF, eds. Plainview (NY): Cold Spring Harbor Laboratory Press
    • Benner SA, Cohen MA, Gonnet GH, Berkowitz DB, Johnson KP. 1993. Reading the Palimpsest: Contemporary biochemical data and the RNA world. Pages 27-70 in Gesteland RF, Atkins JF, eds. The RNA World. Plainview (NY): Cold Spring Harbor Laboratory Press.
    • (1993) The RNA World , pp. 27-70
    • Benner, S.A.1    Cohen, M.A.2    Gonnet, G.H.3    Berkowitz, D.B.4    Johnson, K.P.5
  • 4
    • 0025189769 scopus 로고
    • A model for RNA editing in kinetoplastid mitochondria: "Guide" RNA molecules transcribed from maxicircle DNA provide the edited information
    • Blum B, Bakalara N, Simpson L. 1990. A model for RNA editing in kinetoplastid mitochondria: "Guide" RNA molecules transcribed from maxicircle DNA provide the edited information. Cell 60: 189-198.
    • (1990) Cell , vol.60 , pp. 189-198
    • Blum, B.1    Bakalara, N.2    Simpson, L.3
  • 9
    • 0029294624 scopus 로고
    • Isolation of a ribozyme with 5′-5′ ligase activity
    • Chapman KB, Szostak JW. 1995. Isolation of a ribozyme with 5′-5′ ligase activity. Chemistry and Biology 2: 325-333.
    • (1995) Chemistry and Biology , vol.2 , pp. 325-333
    • Chapman, K.B.1    Szostak, J.W.2
  • 11
    • 0027173323 scopus 로고
    • Three small ribooligonucleotides with specific arginine sites
    • Connell M, Illangasekare M, Yarus M. 1993. Three small ribooligonucleotides with specific arginine sites. Biochemistry 32: 5497-5500.
    • (1993) Biochemistry , vol.32 , pp. 5497-5500
    • Connell, M.1    Illangasekare, M.2    Yarus, M.3
  • 13
    • 0345595351 scopus 로고
    • Foreword
    • Gesteland RF, Atkins JF, eds. Plainview (NY): Cold Spring Harbor Laboratory Press
    • _. 1993. Foreword. Pages xi-xiv in Gesteland RF, Atkins JF, eds. The RNA World. Plainview (NY): Cold Spring Harbor Laboratory Press.
    • (1993) The RNA World
  • 14
    • 0029037713 scopus 로고
    • A DNA metalloenzyme with DNA ligase activity
    • Cuenoud B, Szostak JW. 1995. A DNA metalloenzyme with DNA ligase activity. Nature 375: 611-614.
    • (1995) Nature , vol.375 , pp. 611-614
    • Cuenoud, B.1    Szostak, J.W.2
  • 15
    • 0028898110 scopus 로고
    • Cleavage of an amide bond by a ribozyme
    • Dai X, Mesmaeker AD, Joyce GF. 1995. Cleavage of an amide bond by a ribozyme. Science 267: 237-240.
    • (1995) Science , vol.267 , pp. 237-240
    • Dai, X.1    Mesmaeker, A.D.2    Joyce, G.F.3
  • 16
    • 0029832218 scopus 로고    scopus 로고
    • RNA-catalysed RNA polymerization using nucleoside triphosphates
    • Ekland EH, Bartel DP. 1996. RNA-catalysed RNA polymerization using nucleoside triphosphates. Nature 382: 373-376.
    • (1996) Nature , vol.382 , pp. 373-376
    • Ekland, E.H.1    Bartel, D.P.2
  • 17
    • 0029147392 scopus 로고
    • Structurally complex and highly active RNA ligases derived from random RNA sequences
    • Ekland EH, Szostak JW, Bartel DP. 1995. Structurally complex and highly active RNA ligases derived from random RNA sequences. Science 269: 364-370.
    • (1995) Science , vol.269 , pp. 364-370
    • Ekland, E.H.1    Szostak, J.W.2    Bartel, D.P.3
  • 18
    • 0025074907 scopus 로고
    • In vitro selection of RNA molecules that bind specific ligands
    • Ellington AD, Szostak JW. 1990. In vitro selection of RNA molecules that bind specific ligands. Nature 346: 818-822.
    • (1990) Nature , vol.346 , pp. 818-822
    • Ellington, A.D.1    Szostak, J.W.2
  • 19
    • 0026599465 scopus 로고
    • Selection in vitro of single stranded DNA molecules that fold into specific ligand-binding structures
    • _. 1992. Selection in vitro of single stranded DNA molecules that fold into specific ligand-binding structures. Nature 355: 850-852.
    • (1992) Nature , vol.355 , pp. 850-852
  • 20
    • 84968788990 scopus 로고
    • Stereospecific recognition of tryptophan agarose by in vitro selected RNA
    • Famulok M, Szostak JW. 1992. Stereospecific recognition of tryptophan agarose by in vitro selected RNA. Journal of the American Chemical Society 114: 3990-3991.
    • (1992) Journal of the American Chemical Society , vol.114 , pp. 3990-3991
    • Famulok, M.1    Szostak, J.W.2
  • 22
    • 0023663396 scopus 로고
    • Self-cleavage of plus and minus RNAs of a virusoid and a structural model for the active sites
    • Forster AC, Symons RH. 1987. Self-cleavage of plus and minus RNAs of a virusoid and a structural model for the active sites. Cell 49: 211-220.
    • (1987) Cell , vol.49 , pp. 211-220
    • Forster, A.C.1    Symons, R.H.2
  • 23
    • 36849148382 scopus 로고
    • The RNA world
    • Gilbert W. 1986. The RNA world. Nature 319: 618.
    • (1986) Nature , vol.319 , pp. 618
    • Gilbert, W.1
  • 24
    • 0027723181 scopus 로고
    • Selection and design of high-affinity RNA ligands for HIV-1 Rev
    • Giver L, Bartel DP, Zapp ML, Green MR, Ellington AD. 1993. Selection and design of high-affinity RNA ligands for HIV-1 Rev. Gene 137: 19-24.
    • (1993) Gene , vol.137 , pp. 19-24
    • Giver, L.1    Bartel, D.P.2    Zapp, M.L.3    Green, M.R.4    Ellington, A.D.5
  • 25
    • 0025084575 scopus 로고
    • In vitro genetic analysis of the Tetrahymena self-splicing intron
    • Green R, Ellington AD, Szostak JW. 1990. In vitro genetic analysis of the Tetrahymena self-splicing intron. Nature 347: 406-408.
    • (1990) Nature , vol.347 , pp. 406-408
    • Green, R.1    Ellington, A.D.2    Szostak, J.W.3
  • 26
    • 0021013526 scopus 로고
    • The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme
    • Guerrier-Takada C, Gardiner K, Marsh T, Pace N, Altman S. 1983. The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme. Cell 35: 849-857.
    • (1983) Cell , vol.35 , pp. 849-857
    • Guerrier-Takada, C.1    Gardiner, K.2    Marsh, T.3    Pace, N.4    Altman, S.5
  • 27
    • 0024340908 scopus 로고
    • RNA catalytic properties of the minimum (-)sTRSV sequences
    • Hampel A, Tritz RR. 1989. RNA catalytic properties of the minimum (-)sTRSV sequences. Biochemistry 28: 4929-4933.
    • (1989) Biochemistry , vol.28 , pp. 4929-4933
    • Hampel, A.1    Tritz, R.R.2
  • 28
    • 0344733092 scopus 로고    scopus 로고
    • RNA's revising machinery
    • Hart S. 1996. RNA's revising machinery. BioScience 46: 318-321.
    • (1996) BioScience , vol.46 , pp. 318-321
    • Hart, S.1
  • 29
    • 0025085590 scopus 로고
    • Catalysis of RNA cleavage by the Tetrahymena thermophilia ribozyme. 1. Kinetic description of the reaction of an RNA substrate complementary to the active site
    • Herschlag D, Cech TR. 1990. Catalysis of RNA cleavage by the Tetrahymena thermophilia ribozyme. 1. Kinetic description of the reaction of an RNA substrate complementary to the active site. Biochemistry 29: 10159-10171.
    • (1990) Biochemistry , vol.29 , pp. 10159-10171
    • Herschlag, D.1    Cech, T.R.2
  • 30
    • 0031551113 scopus 로고    scopus 로고
    • 5′-RNA self-capping from guanosine diphosphate
    • Huang F, Yarus M. 1997a. 5′-RNA self-capping from guanosine diphosphate. Biochemistry 36: 6557-6563.
    • (1997) Biochemistry , vol.36 , pp. 6557-6563
    • Huang, F.1    Yarus, M.2
  • 33
    • 0024995219 scopus 로고
    • Self-splicing group II and nuclear pre-mRNA introns: How similar are they?
    • Jacquier A. 1990. Self-splicing group II and nuclear pre-mRNA introns: How similar are they? Trends in Biochemical Science 15: 351-354.
    • (1990) Trends in Biochemical Science , vol.15 , pp. 351-354
    • Jacquier, A.1
  • 34
    • 0028224199 scopus 로고
    • High resolution molecular discrimination by RNA
    • Jenison RD, Gill SC, Pardi A, Polisky B. 1994. High resolution molecular discrimination by RNA. Science 263: 1425-1429.
    • (1994) Science , vol.263 , pp. 1425-1429
    • Jenison, R.D.1    Gill, S.C.2    Pardi, A.3    Polisky, B.4
  • 35
    • 0024443885 scopus 로고
    • Amplification, mutation and selection of catalytic RNA
    • Joyce GF. 1989. Amplification, mutation and selection of catalytic RNA. Gene 82: 83-87.
    • (1989) Gene , vol.82 , pp. 83-87
    • Joyce, G.F.1
  • 36
    • 0029985731 scopus 로고    scopus 로고
    • Amide cleavage by a ribozyme: Correction
    • Joyce GF, Dai X, De Mesmaeker A. 1996. Amide cleavage by a ribozyme: Correction. Nature 272: 18-19.
    • (1996) Nature , vol.272 , pp. 18-19
    • Joyce, G.F.1    Dai, X.2    De Mesmaeker, A.3
  • 38
    • 0020417286 scopus 로고
    • Self-splicing RNA: Autoexcision and auto-cyclization of the ribosomal RNA intervening sequence of Tetrahymena
    • Kruger K, Grabowski P, Zaug AJ, Sands J, Gottschling DE, Cech TR. 1982. Self-splicing RNA: Autoexcision and auto-cyclization of the ribosomal RNA intervening sequence of Tetrahymena. Cell 31: 147-157.
    • (1982) Cell , vol.31 , pp. 147-157
    • Kruger, K.1    Grabowski, P.2    Zaug, A.J.3    Sands, J.4    Gottschling, D.E.5    Cech, T.R.6
  • 39
    • 0027525989 scopus 로고
    • Evolution in vitro of an RNA enzyme with altered metal dependence
    • Lehman N, Joyce JF. 1993. Evolution in vitro of an RNA enzyme with altered metal dependence. Nature 361: 182-185.
    • (1993) Nature , vol.361 , pp. 182-185
    • Lehman, N.1    Joyce, J.F.2
  • 40
    • 0029746712 scopus 로고    scopus 로고
    • A catalytic DNA for porphyrin metalation
    • Li Y, Sen D. 1996. A catalytic DNA for porphyrin metalation. Nature Structural Biology 3: 743-746.
    • (1996) Nature Structural Biology , vol.3 , pp. 743-746
    • Li, Y.1    Sen, D.2
  • 41
    • 0029945146 scopus 로고    scopus 로고
    • Recognition of anionic porphyrins by DNA aptamers
    • Li Y, Geyer RC, Sen D. 1996. Recognition of anionic porphyrins by DNA aptamers. Biochemistry 35: 6911-6922.
    • (1996) Biochemistry , vol.35 , pp. 6911-6922
    • Li, Y.1    Geyer, R.C.2    Sen, D.3
  • 42
    • 0029956108 scopus 로고    scopus 로고
    • Ribozymecatalysed amino-acid transfer reaction
    • Lohse PA, Szostak JW. 1996. Ribozymecatalysed amino-acid transfer reaction. Nature 381: 442-444.
    • (1996) Nature , vol.381 , pp. 442-444
    • Lohse, P.A.1    Szostak, J.W.2
  • 43
    • 0028124128 scopus 로고
    • In vitro evolution of new ribozymes with polynucleotide kinase activity
    • Lorsch JR, Szostak JW. 1994. In vitro evolution of new ribozymes with polynucleotide kinase activity. Nature 371: 31-36.
    • (1994) Nature , vol.371 , pp. 31-36
    • Lorsch, J.R.1    Szostak, J.W.2
  • 44
    • 0002630888 scopus 로고
    • The genomic tag hypothesis: Modern viruses as molecular fossils of ancient strategies for genomic replications
    • Gesteland RF, Atkins JF, eds. Plainview (NY): Cold Spring Harbor Laboratory Press
    • Maizels N, Weiner AM. 1993. The genomic tag hypothesis: Modern viruses as molecular fossils of ancient strategies for genomic replications. Pages 577-602 in Gesteland RF, Atkins JF, eds. The RNA World. Plainview (NY): Cold Spring Harbor Laboratory Press.
    • (1993) The RNA World , pp. 577-602
    • Maizels, N.1    Weiner, A.M.2
  • 46
    • 0014369024 scopus 로고
    • Evolution of the genetic apparatus
    • Orgel LE. 1968. Evolution of the genetic apparatus. Journal of Molecular Biology 38: 381-393.
    • (1968) Journal of Molecular Biology , vol.38 , pp. 381-393
    • Orgel, L.E.1
  • 51
    • 0028030688 scopus 로고
    • Expanding the scope of RNA catalysis
    • Prudent JR, Uno T, Schultz PG. 1994. Expanding the scope of RNA catalysis. Science 264: 1924-1927.
    • (1994) Science , vol.264 , pp. 1924-1927
    • Prudent, J.R.1    Uno, T.2    Schultz, P.G.3
  • 53
    • 0027180473 scopus 로고
    • An RNA motif that binds ATP
    • Sassanfar M, Szostak JW. 1993. An RNA motif that binds ATP. Nature 364: 550-553.
    • (1993) Nature , vol.364 , pp. 550-553
    • Sassanfar, M.1    Szostak, J.W.2
  • 54
    • 0025333084 scopus 로고
    • A site-specific self-cleavage reaction performed by a novel RNa in Neurospora mitochondria
    • Saville BJ, Collins RA. 1990. A site-specific self-cleavage reaction performed by a novel RNA in Neurospora mitochondria. Cell 61: 685-696.
    • (1990) Cell , vol.61 , pp. 685-696
    • Saville, B.J.1    Collins, R.A.2
  • 56
    • 0023747377 scopus 로고
    • Antigenomic RNA of human Hepatitis delta viruses can undergo self-cleavage
    • Sharmeen L, Kuo MYP, Dinner-Gottlieb G, Taylor J. 1988. Antigenomic RNA of human Hepatitis delta viruses can undergo self-cleavage. Journal of Virology 62: 2674-2679.
    • (1988) Journal of Virology , vol.62 , pp. 2674-2679
    • Sharmeen, L.1    Kuo, M.Y.P.2    Dinner-Gottlieb, G.3    Taylor, J.4
  • 57
    • 0030963855 scopus 로고    scopus 로고
    • RNA-catalysed carbon-carbon bond formation
    • Tarasow TM, Tarasow SL, Eaton BE. 1997. RNA-catalysed carbon-carbon bond formation. Nature 389: 54-57.
    • (1997) Nature , vol.389 , pp. 54-57
    • Tarasow, T.M.1    Tarasow, S.L.2    Eaton, B.E.3
  • 58
    • 0028233951 scopus 로고
    • Evolutionary optimization of the catalytic properties of a DNA-cleaving ribozyme
    • Tsang J, Joyce GF. 1994. Evolutionary optimization of the catalytic properties of a DNA-cleaving ribozyme. Biochemistry 33: 5966-5973.
    • (1994) Biochemistry , vol.33 , pp. 5966-5973
    • Tsang, J.1    Joyce, G.F.2
  • 59
    • 0030582393 scopus 로고    scopus 로고
    • Specialization of the DNA-cleaving activity of a group I ribozyme through in vitro evolution
    • _. 1996. Specialization of the DNA-cleaving activity of a group I ribozyme through in vitro evolution. Journal of Molecular Biology 262: 31-42.
    • (1996) Journal of Molecular Biology , vol.262 , pp. 31-42
  • 60
    • 0025194307 scopus 로고
    • Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase
    • Tuerk C, Gold L. 1990. Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase. Science 249: 505-510.
    • (1990) Science , vol.249 , pp. 505-510
    • Tuerk, C.1    Gold, L.2
  • 61
    • 0027751625 scopus 로고
    • In vitro evolution of functional nucleic acids: High-affinity RNA ligands of HIV-1 proteins
    • Tuerk C, MacDougal-Waugh S. 1993. In vitro evolution of functional nucleic acids: High-affinity RNA ligands of HIV-1 proteins. Gene 137: 33-39.
    • (1993) Gene , vol.137 , pp. 33-39
    • Tuerk, C.1    MacDougal-Waugh, S.2
  • 62
    • 0029903899 scopus 로고    scopus 로고
    • In vitro selection of a novel catalytic RNA: Characterization of a sulfur alkylation reaction and interaction with a small peptide
    • Wecker M, Smith D, Gold L. 1996. In vitro selection of a novel catalytic RNA: Characterization of a sulfur alkylation reaction and interaction with a small peptide. RNA 2: 982-994.
    • (1996) RNA , vol.2 , pp. 982-994
    • Wecker, M.1    Smith, D.2    Gold, L.3
  • 63
    • 0017232521 scopus 로고
    • Coenzymes as fossils of an earlier metabolic state
    • White HB III. 1976. Coenzymes as fossils of an earlier metabolic state. Journal of Molecular Evolution 7: 101-104.
    • (1976) Journal of Molecular Evolution , vol.7 , pp. 101-104
    • White III, H.B.1
  • 65
    • 0028911845 scopus 로고
    • In vitro evolution of a self-alkylating ribozyme
    • Wilson C, Szostak JW. 1995. In vitro evolution of a self-alkylating ribozyme. Nature 374: 777-782.
    • (1995) Nature , vol.374 , pp. 777-782
    • Wilson, C.1    Szostak, J.W.2
  • 66
    • 0041597294 scopus 로고
    • The evolution of the genetic code
    • Woese C. New York: Harper & Row
    • Woese C. 1967. The evolution of the genetic code. Pages 179-195 in Woese C. The Genetic Code. New York: Harper & Row.
    • (1967) The Genetic Code , pp. 179-195
    • Woese, C.1
  • 68
    • 0025885722 scopus 로고
    • Mutations in a nonconserved sequence of the Tetrahymena ribozyme increase activity and specificity
    • Young B, Herschlag D, Cech TR. 1991. Mutations in a nonconserved sequence of the Tetrahymena ribozyme increase activity and specificity. Cell 67: 1007-1019.
    • (1991) Cell , vol.67 , pp. 1007-1019
    • Young, B.1    Herschlag, D.2    Cech, T.R.3
  • 69
    • 0022975535 scopus 로고
    • The Tetrahymena ribozyme acts like an RNA restriction endonuclease
    • Zaug AJ, Been MD, Cech TR. 1986. The Tetrahymena ribozyme acts like an RNA restriction endonuclease. Nature 324: 429-433.
    • (1986) Nature , vol.324 , pp. 429-433
    • Zaug, A.J.1    Been, M.D.2    Cech, T.R.3
  • 70
    • 0030688863 scopus 로고    scopus 로고
    • Peptide bond formation by in vitro selected ribozymes
    • Zhang B, Cech TR. 1997. Peptide bond formation by in vitro selected ribozymes. Nature 390: 96-100.
    • (1997) Nature , vol.390 , pp. 96-100
    • Zhang, B.1    Cech, T.R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.