IMPT1, an imprinted gene similar to polyspecific transporter and multi-drug resistance genes

Human Molecular Genetics

Volumn 7, Issue 4, 1998, Pages 597-608

  Dao, Diem ^a   Frank, Dale ^a   Qian, Naifeng ^a   O'Keefe, Denise ^a,c   Vosatka, Robert J ^a   Walsh, Colum P ^b   Tycko, Benjamin ^a  

^a Columbia University ^*  (United States)

^b New York Presbyterian Columbia University Medical Center   (United States)

^c MEMORIAL SLOAN KETTERING CANCER CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CARRIER PROTEIN; GLYCOPROTEIN P; MEMBRANE PROTEIN; MESSENGER RNA;

ALLELE; ANIMAL TISSUE; ARTICLE; CHROMOSOME 11P; EMBRYO MEMBRANE; GENE EXPRESSION; GENE REPRESSION; GENE SWITCHING; GENOME IMPRINTING; HUMAN; HUMAN TISSUE; INTESTINE; KIDNEY; LIVER; MOUSE; MULTIDRUG RESISTANCE; NONHUMAN; PLACENTA; PRIORITY JOURNAL; SEQUENCE HOMOLOGY; TISSUE DISTRIBUTION;

ADULT; ALLELES; AMINO ACID SEQUENCE; ANIMALS; CARRIER PROTEINS; CHILD; CHROMOSOMES, HUMAN, PAIR 11; GENES, MDR; GENOMIC IMPRINTING; HUMANS; INFANT, NEWBORN; MEMBRANE PROTEINS; MICE; MOLECULAR SEQUENCE DATA; ORGANIC CATION TRANSPORT PROTEINS; ORGANIC CATION TRANSPORTER 1; PLACENTA; POLYMORPHISM, GENETIC; TISSUE DISTRIBUTION;

ANIMALIA; BACTERIA (MICROORGANISMS); EUKARYOTA; RODENTIA;

EID: 0031924628     PISSN: 09646906     EISSN: None     Source Type: Journal    
DOI: 10.1093/hmg/7.4.597     Document Type: Article

References (46)

1. Moore, T. and Haig, D. (1991) Genomic imprinting in mammalian development: a parental tug of war. Trends Genet., 7, 45-49.
2. Neumann, B., Kubicka, P. and Barlow, D.P. (1995) Characteristics of imprinted genes. Nature Genet., 9, 12-13.
3. Hurst, L.D., McVean, G. and Moore, T. (1996) Imprinted genes have few and small introns. Nature Genet., 12, 234-237.
4. Bester, T.H. and Tycko, B. (1996) Creation of genomic methylation patterns. Nature Genet., 12, 363-367.
5. DeChiara, T.M., Rubertson, E.J. and Efstratiadis, A. (1991) Paternal imprinting of the mouse insulin-like growth factor II gene. Cell, 64, 849-859.
6. Bartolomei, M.S., Zemel, S. and Tilghman, S.M. (1991) Parental imprinting of the mouse H19 gene. Nature, 351, 153-155.
7. Zhang, Y. and Tycko, B. (1992) Monoallelic expression of the human H19 gene. Nature Genet., 1, 40-44.
8. Rainier, S., Johnson, L., Dobry, C.J., Ping, A.J., Grundy, P.E. and Feinberg, A.P. (1993) Relaxation of imprinted genes in human cancer. Nature, 362, 747-749.
9. Ohlsson, R., Nystrom, A., Pfeifer-Ohlsson, S., Tohonen, V., Hedbourg, F., Schofield, P., Flam, F. and Ekstrom, T.J. (1993) IGF2 is parentally imprinted during human embryogenesis and in the Beckwith-Wiedemann syndrome. Nature Genet., 4, 94-97.
10. Giannoukakis, N., Deal, C., Paquette, J., Goodyer, C.G. and Polychronakos, C. (1993) Parental genomic imprinting of the human IGF2 gene. Nature Genet., 4, 98-101.
11. Giddings, S.J., King, C.D., Harman, K.W., Flood, J.F. and Carnaghi, L.R. (1994) Allele-specific inactivation of insulin 1 and 2, in the mouse yolk sac, indicates imprinting. Nature Genet., 6, 310-313.
12. Guillemot, F., Caspary, T., Tilghman, S.M., Copeland, N.G., Gilbert, D.J., Jenkins, N.A., Anderson, D.J.., Joyner, A.L., Rossant, J. and Nagy, A. (1995) Genomic imprinting of Mash2, a mouse gene required for trophoblast development. Nature Genet., 9, 235-241.
13. Hatada, I. and Mukai, T. (1995) Genomic imprinting of p57Kip2, a cyclin-dependent kinase inhibitor, in mouse. Nature Genet., 11, 204-206.
14. Chung, W.-Y., Yuan, L., Feng, L., Hensle, T. and Tycko, B. (1996) Chromosome 11p15.5 regional imprinting: comparative analysis of KIP2 and H19 in human tissues and Wilms' tumors. Hum. Mol. Genet., 5, 1101-1108.
15. Lee, M.P, Hu, R.-J., Johnson, L.A. and Feinberg, A.P. (1997) Human KVLQTI gene shows tissue specific imprinting and encompasses Beckwith-Wiedemann syndrome chromosomal rearrangements. Nature Genet., 15, 181-185.
16. Alders, M., Hodges, M., Hadjantonakis, A., Postmus, J., van Wijk, I., Bliek, J., de Meulemeester, M., Westerveld, A., Guillemot, F., Oudejans, C., Little, P. and Mannens, M. (1997) The human Achaete-Scute homologue 2 (ASCL2, HASH2 ) maps to chromosome 11p15.5, close to IGF2 and is expressed in extravillus trophoblasts. Hum. Mol. Genet., 6, 859-867.
17. Qian, N., Frank, D., O'Keefe, D., Dao, D., Zhao, L., Yuan, L., Wang, Q., Keating, M., Walsh, C. and Tycko, B. (1997) The IPL gene on chromosome 11p15.5 is imprinted in humans and mice and is similar to TDAG51, implicated in Fas expression and apoptosis. Hum. Mol. Genet., 6, 2021-2029.
18. Moulton, T., Chung, W.-Y., Yuan, L., Hensle, T., Waber, P., Nisen, P. and Tycko, B. (1995) Genomic imprinting and Wilms' tumor. Med. Pediat. Oncol., 27, 476-483.
19. Neyfakh, A.A., Bidenko, V.E. and Chen, L.B. (1991) Efflux-mediated multidrug resistance in Bacillus subtillus: similarities and dissimilarities with the mammalian system. Proc. Natl Acad Sci. USA, 88, 4781-4785.
20. Allard, J.D. and Bertrand, K.P. (1993) Sequence of a class E tetracycline resistance gene from Escherichia coli and comparison of related tetracycline efflux proteins. J. Bacteriol., 175, 4554-4560.
21. Henikoff, S., Henikoff, J.G., Alford, W.J. and Pietrokovski, S. (1995) Automated construction and graphical presentation of protein blocks from unaligned sequences, Gene-COMBIS. Gene, 163, 17-26.
22. Lopez-Nieto, C.E., You, G., Bush, K.T., Barros, E.J.G, Beier, D.R. and Nigam, S.K. (1997) Molecular cloning and characterization of NKT, a gene product related to the organic cation transporter family that is almost exclusively expressed in kidney. J. Biol. Chem., 272, 6471-6478.
23. Hofmann, K. and Stoffel, W. (1993) TMbase - a database of membrane spanning proteins segments. Biol. Chem. Hoppe-Seyler, 347, 166.
24. Zhang, Y., Shields, T., Crenshaw, T., Hao, Y., Moulton, T. and Tycko, B. (1993) Imprinting of human H19: allele-specific CpG methylation, loss of the active allele in Wilms' tumor, and potential for somatic allele switching. Am. J Hum. Genet., 53, 113-124.
25. Mitsuya, K., Sui, H., Meguro, M., Kugoh, H., Jinno, Y., Niikawa, N. and Oshimura, M. (1997) Paternal expression of WT1 in human fibroblasts and lymphocytes. Hum Mol. Genet., 6, 2243-2246.
26. Schweifer, N., Valk, P.J., Deiwel, R., Cox, R., Francis, F., Meier-Ewert, S., Lehrach, H., and Barlow, D.P. (1997) Characterization of the C3 YAC contig from proximal mouse chromosome 17 and analysis of allelic expression of genes flanking the imprinted Igf2r gene. Genomics, 43, 285-297.
27. Xu, Y., Goodyer, C.G., Deal, C. and Polychronakos, C. (1993) Functional polymorphism in the parental imprinting of the human IGF2R gene. Biochem. Biophys. Res. Commun., 747-754.
28. Jinno, Y., Yun, K., Nishiwaki, K., Kubota, T., Ogawa, O., Reeve, A.E. and Niikawa, N. (1994) Mosaic and polymorphic imprinting of the WT1 gene in humans. Nature Genet., 6, 305-309.
29. Vu, T.H. and Hoffman, A.R. (1994) Promoter-specific imprinting of the human insulin-like growth factor-II gene. Nature, 371, 714-717.
30. Thomas, B.J. and Rothstein, R. (1991) Sex, maps, and imprinting. Cell, 64, 1-3.
31. Paldi, A., Gyapay, G. and Jami, J. (1995) Imprinted chromosomal regions of the human genome display sex-specific meiotic recombination frequencies. Curr. Biol., 5, 1030-1035.
32. Steenman, M.J.C., Rainier, S., Dobry, C.J., Grundy. P., Horon, I.L. and Feinberg, A.P. (1994) Loss of imprinting of IGf2 is linked to reduced expression and abnormal methylation of H19 in Wilms' tumor. Nature Genet., 7, 433-439.
33. Moulton, T., Crenshaw, T., Hao, Y, Moosikasuwan, J., Lin, N., Dembitzer, F., Hensle, T., Weiss, L., McMorrow, L., Loew, T., Kraus, W., Gerald, W. and Tycko, B. (1994) Epigenetic lesions at the H19 locus in Wilms' tumor patients. Nature Genet., 7, 440-447.
34. Taniguchi, T., Sullivan, M.J., Osamu, O. and Reeve, A. (1995) Epigenetic changes encompassing the IGF2/H19 locus associated with relaxation of IGF2 imprinting and silencing of H19 in Wilms tumor. Proc. Natl Acad. Sci. USA, 92, 2159-2163.
35. Leighton, P.A., Ingram, R.S., Eggenschwiler, J., Efstratiatis, A. and Tilghman, S.M. (1995) Disruption of imprinting caused by deletion of the H19 gene region in mice. Nature, 375, 34-39.
36. Tycko, B. (1997) DNA methylation in genomic imprinting. Mutat. Res., 386, 131-140.
37. Feil, R., Walter, J., Allen, N.D. and Reik, W. (1994) Developmental control of allelic methylation in the mouse Igf2 and H19 genes. Development, 120, 2933-2943.
38. Tremblay, K.D., Saam, J.R., Ingram, R.S., Tilghman, S.M. and Bartolomei, M.S. (1995) A paternal-specific methylation imprint marks the alleles of the mouse H19 gene. Nature Genet., 9, 407-413.
39. Li., E., Beard, C. and Jaenisch, R. (1993) Role for DNA methylation in genomic imprinting. Nature, 366, 362-365.
40. Wade, P.A., Pruss, D. and Wolffe, A.P. (1997) Histone acetylation: chromatin in action. Trends Biochem. Sci., 22, 128-132.
41. Grunstein, M. (1997) Histone acetylation in chromatin structure and transcription. Nature, 389, 349-352.
42. Reid, L.H., Davies, C., Cooper, P.R., Crider-Miller, S.J., Sait, S.N.J., Nowak, N.J., Evans, G., Stanbridge, E.J., deJong, P., Shows, T.B., Weissman, B.E. and Higgins, M.J. (1997) A 1-Mb physical map and PAC contig of the imprinted domain in 11p15.5 that contains TAPA1 and the BWSCR1/WT2 region. Genomics, 43, 366-375.
43. Tsang, P., Gilles, F., Yuan, L., Kuo, Y.-H., Lupu, F., Samara, G., Moosikasuwan, J., Goy, A., Zelenetz, A.D., Selleri, L. and Tycko, B. (1995) A novel L23-related gene 40 Kb downstream of the imprinted H19 gene is biallelically expressed in mid-fetal and adult human tissues. Hum. Mol. Genet., 4, 1499-1507.
44. Yuan, L., Qian, N., Feng, L. and Tycko, B. (1996) An extended region of biallelic gene expression and rodent-human synteny downstream of the imprinted H19 gene on chromosome 11p15.5. Hum. Mol. Genet., 5, 1931-1937.
45. Hu, R.-J., Lee, M.P., Johnson, L.A. and Feinberg, A.P. (1996) A novel human homologue of yeast nucleosome assembly protein, 65 kb centromeric to the p57 KIP2 gene, is biallelically expressed in fetal and adult tissues. Hum. Mol. Genet., 5, 1743-1749.
46. Tycko, B., Feng, L., Nguyen, L., Francis, A., Hays, A., Chung, W.-Y., Tang, M.-X., Stern, Y., Sahota, A., Hendrie, H. and Mayeux, R. (1996) Polymorphisms in the human apolipoprotein-J/clusterin gene: ethnic variation and distribution in Alzheimer's disease. Hum. Genet., 98, 430-436.