Cycles of famine and feast: The starvation and outgrowth strategies of a marine Vibrio

Journal of Biosciences

Volumn 23, Issue 4, 1998, Pages 501-511

  Srinivasan, Sujatha ^a   Kjelleberg, Staffan ^a  

^a UNIVERSITY OF NEW SOUTH WALES   (Australia)

Author keywords

Carbon starvation; Extracellular signals; Marine Vibrio; Outgrowth; Recovery; Stringent response

Indexed keywords

MESSENGER RNA; SIGMA FACTOR;

ADAPTATION; BACTERIAL GROWTH; BACTERIAL METABOLISM; CELL SURVIVAL; CONFERENCE PAPER; GENE EXPRESSION REGULATION; MESSENGER RNA SYNTHESIS; NONHUMAN; STARVATION; VIBRIO;

VIBRIO;

EID: 0031789398     PISSN: 02505991     EISSN: None     Source Type: Journal    
DOI: 10.1007/BF02936144     Document Type: Conference Paper

References (81)

1. Albertson N H, Nysiröm T and Kjelleberg S 1990a Starvationinduced modulations in binding protein-dependent glucose transport by the marine Vibrio sp. S14; FEMS Microbiol. Lett. 70 205-210
2. Albertson N H, Nyström T and Kjelleberg S 1990b Macromolecular synthesis during recovery of the marine Vibrio sp. S14 during starvation; J. Gen. Microbiol. 136 2201-2207
3. Albertson N H, Nyström T and Kjelleberg S 1990c Functional mRNA half-lives in the marine Vibrio sp. S14 during starvation and recovery; J. Gen. Microbiol. 136 2195-2199
4. Barber C E, Tang J L, Fend J X, Pan M Q, Wilson T J G, Slater H, Dow J M, Williams P and Daniels M J 1997 A novel regulatory system required for pathogenicity of Xanthomonas campestris is mediated by a small diffusible signal molecule; Mol. Microbiol. 24 555-566
5. s dependent genes in Escherichia coli; J. Bacteriol. 177 3455-3464
6. Bibb M 1996 The regulation of antibiotic production in Streptomyces coelicolor A3(2); Microbiology 142 1335-1344
7. s-dependent genes in Escherichia coli; J. Bacteriol. 177 413-422
8. Cashel M, Gentry D R, Hernandez V J and Vinella D 1996 The stringent response; in Escherichia coli and Salmonella: cellular and molecular biology (eds) F C Neidhardt, R C III, J L Ingraham, E C C Lin, K B Low, B Magasanik, W S Reznikoff, M Riley, M Schaechter and H E Umbarger (Washington: ASM Press) pp 1458-1496
9. Chaloner-Larson G and Yamazaki H 1978 Effects of the spoT and relA mutation on the synthesis and accumulation of ppGpp and RNA during glucose starvation; Can. J. Biochem. 56 264-272
10. Chi E and Bartlett D H 1995 An rpoE-like locus controls outer membrane protein synthesis and growth at cold temperatures and high pressures in the deep-sea bacterium Photobacterium sp. strain SS9; Mol. Microbiol. 17 713-726
11. Clough S J, Lee K-E, Schell M A and Denny T P 1997 A two-component system in Ralstonia (Pseudomonas) solanacearum modulates the production of PhcA-regulated virulence factors in response to 3-hydroxypalmitic acid methyl ester; J. Bacteriol. 179 3639-3648
12. Downard J and Toal D 1995 Branched-chain fatty acids: the case for a novel form of cell-cell signalling during Myxococcus xanthus development; Mol. Microbiol. 16 171-175
13. Eguchi M, Nishikawa T, Macdonald K, Cavicchioli R, Gottschal J C and Kjelleberg S 1996 Responses to stress and nutrient availability by the marine ultramicrobacterium Sphingomonas sp. strain RB2256; Appl. Environ. Microbiol. 62 1287-1294
14. Flärdh K and Kjelleberg S 1994 Glucose upshift of carbon-starved marine Vibrio sp. strain S14 causes amino acid starvation and induction of the stringent response; J. Bacteriol. 176 5897-5903
15. Flärdh K, Axberg T, Albertson N H and Kjelleberg S 1994 Stringent control during carbon starvation of marine Vibrio sp. strain S14: Molecular cloning, nuclcotide sequence and deletion of the relA gene; J. Bacteriol. 176 5949-5957
16. Flärdh K, Cohen P S and Kjelleberg S 1992 Ribosomes exist in large excess over the apparent demand for protein synthesis during carbon starvation in marine Vibrio sp. strain CCUG 15956; J. Bacteriol. 174 6780-6788
17. Flavier A B, Clough S J, Schell M A and Denny T P 1997a Identification of 3-hydroxypalmitic acid methyl ester as a novel autoregulator controlling virulence in Ralstonia solanacearum; Mol. Microbiol. 26 251-259
18. Flavier A B, Ganova-Raeva L M, Schell M A and Denny T P 1997b Hierarchical autoinduction in Ralstonia solanacearum: control of acyl-homoserine lactone production by a novel autoregulatory system response to 3-hydroxypalmitic acid methyl ester; J. Bacteriol. 179 7089-7097
19. Fuqua C, Winans S C and Greenberg EP 1996 Census and consensus in bacterial ecosystems: The LuxR-LuxI family of quorum-sensing transcriptional regulators; Annu. Rev. Microbiol. 50 727-751
20. Fuqua W C, Winans S C and Greenberg P E 1994 Quorum sensing in bacteria: the LuxR-Luxl family of cell densityresponsive transcriptional regulators; J. Bacteriol. 176 269-275
21. Garcia-Lara J, Shang L H and Rothfield L I 1996 An extracellular factor regulates expression of sdiA, a transcriptional activator of cell division genes in Escherichia coli; J. Bacteriol. 178 2742-2748
22. s is positively regulated by ppGpp; J. Bacteriol 175 7982-7989
23. Givskov M, de Nys R, Manefield M, Gram L, Maximilien R, Eberl L, Molin S, Steinberg P D and Kjelleberg S 1996 Eukaryotic interference with homoserine lactone-mediated prokaryotic signalling; J. Bacteriol. 178 6618-6622
24. Givskov M, Eberl L, Möller S, Poulsen, L K and Molin S 1994 Responses to nutrient starvation in Pseudomonas putida KT2442: analysis of general cross-protection, cell shape, and macromolecular content; J. Bacteriol. 176 7-14
25. Gram L, de Nys R, Maximilien R, Givskov M, Steinberg P and Kjelleberg S 1996 Inhibitory effects of secondary metabolites from the red alga Delisea pulchra on swarming motility of Proteus mirabilis; Appl. Environ. Microbiol. 62 4284-4287
26. Gray K M 1997 Intercellular communication and group behavior in bacteria; TIMS 5 184-188
27. Gray K M, Pearson J P, Downie J A, Boboye B E A and Greenberg E P 1996 Cell-to-cell signaling in the symbiotic nitrogen-fixing bacterium Rhizobium leguminosarum: autoinduction of a stationary phase and rhizosphere-expressed genes; J. Bacteriol. 178 372-376
28. Gross C A 1996 Function and regulation of the heat shock proteins; in Escherichia coli and Salmonella: cellular and molecular biology (eds) F C Neidhardt, R C III, J L Ingraham, E C C Lin, K B Low, B Magasanik, W S Reznikoff, M Riley, M Schaechter and H E Umbargcr (Washington: ASM Press) pp 1382-1399
29. Grossman A D 1995 Genetic networks controlling the initiation of sporulation and the development of genetic competence in Bacillus subtilis; Annu. Rev. Genet. 29 477-508
30. s as a global regulator in the osmotic control of gene expression in Escherichia coli; Mol. Microbiol. 21 887-893
31. Hengge-Aronis R 1996h Regulation of gene expression during entry into stationary phase; in Escherichia coli and Salmonella: cellular and molecular biology (eds) F C Neidhardt, R C III, J L Ingraham, E C C Lin, K B Low, B Magasanik, W S Reznikoff, M Riley, M Schaechter and H E Umbarger (Washington: ASM Press) pp 1497-1512
32. Hengge-Aronis R 1993 The role of rpoS in the early stationary-phase gene regulation in Escherichia coli K12; in Starvation in Bacteria (ed.) S Kjelleberg (New York: Plenum Press) pp 171-200
33. E, is essential for bacterial growth at high temperature; J. Bacterial. 177 2918-2922
34. Holmquist L and Kjelleberg S 1993 Changes in viability, respiratory activity and morphology of the marine Vibrio sp. strain S14 during starvation for individual nutrient and subsequent recovery; FEMS Microbiol. Ecol. 12 215-224
35. Horinouchi S and Beppu T 1994 A-factor as a microbial hormone that controls cellular differentiation and secondary metabolism in Streptoinyces griseus; Mol. Microbiol. 12 859-864
36. Horinouchi S and Beppu T 1992 Autoregulatory factors and communication in actinomycetes; Annu. Rev. Microbiol. 46 377-398
37. Huisman G W and Kolter R 1994 Sensing starvation: a homoserine-laclone-dcpcndenl signaling pathway in Escherichia coli; Science 265 537-539
38. Humphrey B, Kjelleberg S and Marshall K C 1983 Responses of marine bacteria under starvation conditions at a solid-water interface; Appl. Environ. Microbiol. 45 43-47
39. Kaiser D and Kroos L 1993 Intercellular signaling; in Myxobacteria II (eds) M Dworkin and D Kaiser (Washington DC; ASM) pp 257-283
40. Kaplan H B and Plamann L 1996 A Myxococcus xanthus cell density-sensing system required for multicellular development; FEMS Microbiol. Lett. 139 89-95
41. Kaprelyants A S and Kelll D B 1996 Do bacteria need to communicate with each other for growth?; TIMS 4 237-242
42. 54; J. Bacteriol. 177 1850-1859
43. Kjelleberg S, Flärdh K, Nyström T and Moriarty D J W 1993a Growth limitation and starvation of bacteria; in Aquatic microbiology: An ecological approach (ed.) T Ford (Oxford: Blackwell) pp 289-320
44. Kjelleberg S, Albertson N, Flärdh K, Holmquist L, Jouper-Jaan Å, Marouga R, Östling J, Svenblad B and Weichart D 1993b How do non-differentiating bacteria adapt to starvation?; Antonie van Leeuwenhoek 63 333-341
45. s subunit of RNA polymerase in Escherichia coli is controlled at the levels of transcription, translation, and protein stability; Genes Dev. 8 1600-1612
46. Lange R and Hengge-Aronis R 1991 Identification of a central regulator of stationary phase gene expression in Escherichia coli; Mol. Microbiol. 5 49-59
47. Latifi A, Foglino M, Tanaka K, Williams P and Lazdunski A 1996 A hierarchical quorum-sensing cascade in Pseudomonas aeruginosa links the transcriptional activators LasR and RhIR (VsmR) to expression of the stationary phase sigma factor RpoS; Mol. Microbiol. 21 1137-1146
48. Lonetto M A, Brown K L, Rudd K E and Buttner M J 1994 Analysis of the Streptomyces coelicolor sigE gene reveals the existence of a subfamily of eubacterial RNA polymerase σ factors involved in the regulation of extracytoplasmic functions; Proc. Natl. Acad. Sci. USA 91 7573-7577
49. Magnuson R, Solomon J and Grossman A D 1994 Biochemical and genetic characterisation of a competence pheromone from Bacillus subtilis; Cell 77 207-216
50. Marouga R and Kjelleberg S 1996 Synthesis of immediate upshift (Iup) proteins during recovery of marine Vibrio sp. strain S14 subjected to long-term carbon starvation; J. Bacteriol. 178 817-822
51. Matin A 1991 The molecular basis of carbon-starvation-induced general resistance in Escherichia coli; Mol. Microbiol. 5 3-10
52. E, an Escherichia coli heat-inducible sigma-factor, is modulated by expression of outer membrane proteins; Genes Dev. 7 2618-2628
53. Missiakas D, Betton J M and Raina S 1996 New components of protein folding in extracytoplasmic compartments of Escherichia coli SurA, FkpA and Skp/OmpH; Mol. Microbiol. 21 871-884
54. Moré M I, Finger L D, Stryker J I, Fuqua C, Eberhard A and Winans S C 1996 Enzymatic synthesis of a quorum-sensing autoinducer through use of defined substrates; Science 272 1655-1658
55. Moriarty D J W and Bell R T 1993 Bacterial growth and starvation in aquatic environments; in Starvation in bacteria (ed.) S Kjelleberg (New York: Plenum Press) pp 25-53
56. Morita R Y 1985 Starvation and miniaturisation of heterotrophs, with special emphasis on maintenance of the starved viable state; in Bacteria in their natural environments (eds) M M Fletcher and G D Floodgate (New York: Academic Press) pp 111-130
57. Morita R Y 1993 Bioavailability of energy and the starvation state; in Starvation in bacteria (ed.) S Kjelleberg (New York: Plenum Press) pp 1-23
58. Nelson D R, Sadlowski Y, Eguchi M and Kjelleberg S 1997 The starvation-stress response of Vibrio (Listonella) anguillarum; Microbiology 143 2305-2312
59. Nikolaev Y A 1997 Involvement of exometabolites in stress adaptation of Escherichia coli; Microbiology 66 28-31
60. Nyström T, Olsson R M and Kjelleberg S 1992 Survival, stress resistance, and alterations in protein expression in the marine Vibrio sp. strain S14 during starvation for different individual nutrients; Appl. Environ. Microbiol. 58 55-65
61. Nyström T, Flärdh K and Kjelleberg S 1990 Responses to multiple-nutrient starvation in a marine Vibrio sp. strain CCUG 15956; J. Bacteriol. 172 7085-7079
62. Nyström T, Albertson N and Kjelleberg S 1988 Synthesis of membrane and periplasmic proteins during starvation of a marine Vibrio sp.; J. Gen. Microbiol. 134 1645-1651
63. Östling J 1996 On the regulation of the carbon starvation response in a marine Vibrio sp., Ph. D thesis, Göteborg University, Göteborg, Sweden
64. Östling J, Holmquist L and Kjelleberg S 1996 Global analysis of the carbon starvation response of a marine Vibrio disrupted in genes homologous to relA and spoT; J. Bacteriol. 178 4901-4908
65. Östling J, Flärdh K and Kjelleberg S 1995 Isolation of a carbon starvation regulatory mutant in a marine Vibrio; J. Bacteriol. 177 6978-6982
66. Östling J, Holmquist L, Flärdh K, Svenblad B, Jouper-Jaan Å and Kjelleberg S 1993 Starvation and recovery of Vibrio; in Starvation in bacteria (ed.) S Kjelleberg (New York: Plenum Press) pp 103-127
67. E is an essential sigma factor in Escherichia coli; J. Bacterial. 179 6862-6864
68. Reddy P S, Raghavan A and Chatterji D 1995 Evidence for a ppGpp binding site on Escherichia coli RNA polymerase: proximity relationship with the rifampicin-binding domain; Mol. Micrabiol. 15 255-265
69. Rockabrand D, Livers K, Austin T, Kaiser R, Jenscn D, Burgess R and Blum P 1998 Roles of DnaK and RpoS in starvation-induced thermotolerancc of Escherichia coli; J. Bacteriol. 180 846-854
70. E, in Escherichia coli; EMBO J. 14 1032-1042
71. Schaefer A L, Hanzelka B L, Eberhard A and Greenberg E P 1996 Quorum sensing in Vibrio fischeri: probing autoinducer-LuxR interactions with autoinducer analogs; J. Bacteriol. 178 2897-2901
72. s) by ClpXP protease; J. Bacteriol. 178 470-476
73. Shiga Y, Mizuno H and Akanuma H 1993 Conditional synthesis and utilization of 1, 5-anhydroglucitol in Escherichia coli; J. Bacteriol. 175 7138-7141
74. Spector M P and Foster J W 1993 Starvation-stress response (SSR) of Salmonella typhimurium. Gene expression and survival during nutrient starvation; in Starvation in bacteria (ed.) S Kjelleberg (New York: Plenum Press) pp 201-224
75. Srinivasan S, Östling J, Charlton T, de Nys R, Takayama K and Kjelleberg S 1998 Extracellular signal molecules(s) are involved in the carbon starvation response of a marine Vibrio sp. strain S14; J. Bacteriol. 180 201-209
76. Stretton S, Danon S J, Kjelleberg S and Goodman A E 1997 Changes in cell morphology and motility in the marine Vibrio sp. strain S14 during conditions of starvation and recovery; FEMS Microbiol. Lett. 146 23-29
77. Swift S, Bainton N J and Winson M K 1994 Gram-negative bacterial communication by N-acyl homoserine lactones: a universal language?; TIMS 2 193-198
78. Swift S, Throup J P, Williams P, Salmond G P C and Stewart G S A B 1996 Quorum sensing: a population-density component in the determination of bacterial phenotype; TIBS 21 214-219
79. van Overbeek L S, van Elsas J D and van Veen J A 1997 Pseudomonas fluorescent Tn5-B20 mutant RA92 responds to carbon limitation in soil; FEMS Microbiol. Ecol. 24 57-71
80. Xiao H, Kalman M, Ikehara K, Zemel S, Glaser G and Cashel M 1991 Residual guanosine 3′, 5′-bispyrophosphate synthetic activity of relA null mutants can be eliminated by spoT null mutations; J. Biol. Chem. 266 5980-5990
81. Yura T, Nagai H and Mori H 1993 Regulation of the heat shock response in bacteria; Annu. Rev. Microbiol. 47 321-350