Structural and functional analysis of chromatin assembled from defined histones

Methods: A Companion to Methods in Enzymology

Volumn 15, Issue 4, 1998, Pages 343-353

  Nightingale, Karl P ^a   Becker, Peter B ^a  

^a EUROPEAN MOLECULAR BIOLOGY LABORATORY   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

HISTONE;

ACETYLATION; CHROMATIN STRUCTURE; DNA TRANSCRIPTION; DROSOPHILA; EMBRYO; NONHUMAN; NUCLEOSOME; PRIORITY JOURNAL; REVIEW;

EID: 0031670182     PISSN: 10462023     EISSN: None     Source Type: Journal    
DOI: 10.1006/meth.1998.0638     Document Type: Article

References (52)

1. Owen-Hughes, T., and Workman, J. L. (1994) Crit. Rev. Eukaryote Gene Expression 8, 1-39.
2. Felsenfeld, G. (1996) Cell 86, 13-19.
3. Durrin, L. K., Mann, R. K., Kayne, P. S., and Grunstein, M. (1991) Cell 65, 1023-1031.
4. Lenfant, F., Mann, R. K., Thomsen, B., Ling, X., and Grunstein, M. (1996) EMBO J. 15, 3974-3985.
5. Cairns, B. R., Lorch, Y., Li, Y., Zhang, M., Lacomis, L., Erdjument, B. H., Tempst, P., Du, J., Laurent, B., and Kornberg, R. D. (1996) Cell 87, 1249-1260.
6. Peterson, C. L., and Tamkun, J. W. (1995) Trends Biochem. Sci. 20, 143-146.
7. Luger, K., Mäder, A. W., Richmond, R. K., Sargent, D. F., and Richmond, T. J. (1997) Nature 389, 251-260.
8. Hayes, J. J., Tullius, T. D., and Wolffe, A. P. (1991) Proc. Natl. Acad. Sci. USA 87, 7405-7409.
9. Pennings, S., Meersseman, G., and Bradbury, M. E. (1991) J. Mol. Biol. 220, 101-110.
10. Polach, K. J., and Widom, J. (1995) J. Mol. Biol. 254, 130-149.
11. Hayes, J. J., and Wolffe, A. P. (1993) Proc. Natl. Acad. Sci. USA 90, 6415-6419.
12. Pruss, D.,B. B., Persinger, J., Hayes, J. J., Arents, G., Moudrianakis, E. N., and Wolffe, A. P. (1996) Science 274, 614-617.
13. Ura, K., Hayes, J. J., and Wolffe, A. P. (1995) EMBO J. 14, 3752-3765.
14. Schwarz, P. M., and Hansen, J. C. (1994) J. Biol. Chem. 269, 16284-16289.
15. Garcia-Ramirez, M., Rocchini, C., and Ausio, J. (1995) J. Biol. Chem. 270, 17923-17928.
16. Shimamura, A., Jessee, B., and Worcel, A. (1989) Methods Enzymol. 170, 603-611.
17. Almouzni, G., and Méchali, M. (1988) EMBO J. 7, 4355-4365.
18. Becker, P. B., Tsukiyama, T., and Wu, C. (1994) Methods Cell Biol. 44, 207-223.
19. Ito, T., Bulger, M., Kobayashi, R., and Kadonaga, J. T. (1996) Mol. Cell. Biol. 16, 3112-3124.
20. Ito, T., Bulger, M., Pazin, M. J., Kobayashi, R., and Kadonaga, J. T. (1997) Cell 90, 145-155.
21. Blank, T. A., and Becker, P. B. (1995) J. Mol. Biol. 252, 305-313.
22. Tsukiyama, T., Becker, P. B., and Wu, C. (1994) Nature 367, 525-532.
23. Tsukiyama, T., and Wu, C. (1995) Cell 83, 1011-1020.
24. Varga-Weisz, P. D., Wilm, M., Bonte, E., Dumas, K., Mann, M., and Becker, P. B. (1997) Nature 388, 598-602.
25. Sapp, M., and Worcel, A. (1990) J. Biol. Chem. 265, 9357-9365.
26. Zucker, K., and Worcel, A. (1990) J. Biol. Chem. 265, 14487-14496.
27. Tremethick, D. J., and Frommer, M. (1992) J. Biol. Chem. 267, 15041-15048.
28. Bulger, M., Ito, T., Kamakaka, R. T., and Kadonaga, J. T. (1995) Proc. Natl. Acad. Sci. USA 92, 11720-11730.
29. Nightingale, K. P., Wellinger, R., Sogo, J., and Becker, P. B. (1998) EMBO J. 17, 2865-2876.
30. Krajewski, W. A., and Becker, P. B. (1998) Proc. Natl. Acad. Sci. USA 95, 1540-1545.
31. Van Holde, K. E. (1988) in Chromatin (Rich, A., Ed.), Springer, Berlin.
32. Hebbes, T. R., Clayton, A. L., Thorne, A. W., and Crane-Robinson, C. (1994) EMBO J. 13, 1823-1830.
33. O'Neill, L. P., and Turner, B. M. (1995) EMBO J. 14, 3946-3957.
34. Bone, J. R., Lavender, J., Richman, R., Palmer, M. J., Turner, B. M., and Kuroda, M. I. (1994) Genes Dev. 8, 96-104.
35. Becker, P. B., and Wu, C. (1992) Mol. Cell. Biol. 12, 2241-2249.
36. Kamakaka, R. T., Bulger, M., and Kadonaga, J. T. (1993) Genes Dev. 7, 1779-1795.
37. Sandaltzopoulos, R., Blank, T., and Becker, P. B. (1994) EMBO J. 13, 373-379.
38. Simon, R. H., and Felsenfeld, G. (1979) Nucleic Acids Res. 6, 689-696.
39. Hansen, J. C., and Lohr, D. (1993) J. Biol. Chem. 268, 5840-5848.
40. Godde, J. S., and Widom, J. (1992) J. Mol. Biol. 226, 1009-1025.
41. Ner, S. S., and Travers, A. A. (1994) EMBO J. 13, 1817-1822.
42. Zlatanova, J., and Van Holde, K. (1996) Prog. Nucleic Acid Res. Mol. Biol. 52, 217-259.
43. Sandaltzopoulos, R., and Becker, P. B. (1998) Mol. Cell. Biol. 18, 361-367.
44. Norton, V. G., Imai, B. S., Yau, P., and Bradbury, E. M. (1989) Cell 57, 449-457.
45. Lutter, L. C., Judis, L., and Paretti, R. F. (1992) Mol. Cell. Biol. 12, 5004-5014.
46. Sogo, J. M., Ness, P. J., Widmer, R. M., Parish, R. W., and Koller, T. (1984) J. Mol. Biol. 178, 897-919.
47. Conconi, A., Losa, R., Koller, T., and Sogo, J. M. (1984) J. Mol. Biol. 178, 920-928.
48. Sogo, J. M., Stahl, H., Koller, T., and Knippers, R. (1986) J. Mol. Biol. 189, 189-204.
49. Gasser, R., Koller, T., and Sogo, J. M. (1996) J. Mol. Biol. 258, 224-239.
50. Saavedra, R. A., and Huberman, J. A. (1986) Cell 45, 65-70.
51. Morse, R. H., Pederson, D. S., Dean, A., and Simpson, R. T. (1987) Nucleic Acids Res. 15, 10311-10330.
52. Becker, P. B., Rabindran, S., and Wu, C. (1991) Proc. Natl. Acad. Sci. USA 88, 4109-4113.