Identification of a specific interaction between the coronavirus mouse hepatitis virus A59 nucleocapsid protein and packaging signal

Virology

Volumn 239, Issue 1, 1997, Pages 78-86

  Molenkamp, Richard ^a   Spaan, Willy J M ^a  

^a LEIDEN UNIVERSITY   (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

CAPSID PROTEIN; MESSENGER RNA; RECOMBINANT PROTEIN; RNA; TRANSFER RNA; VIRUS PROTEIN;

AMINO TERMINAL SEQUENCE; ANIMAL CELL; ARTICLE; CONTROLLED STUDY; CYTOPLASM; MOUSE; MURINE HEPATITIS CORONAVIRUS; NONHUMAN; OPEN READING FRAME; PRIORITY JOURNAL; SIGNAL TRANSDUCTION; VIRION; VIRUS GENOME; VIRUS NUCLEOCAPSID;

ANIMALIA; CORONAVIRUS; MIRIDAE; MURINAE; MURINE HEPATITIS VIRUS; RNA VIRUSES;

EID: 0031472878     PISSN: 00426822     EISSN: None     Source Type: Journal    
DOI: 10.1006/viro.1997.8867     Document Type: Article

References (54)

1. Aldovini A., Young R. A. Mutations of RNA and protein sequences involved in human immunodeficiency virus type 1 packaging result in production of noninfectious virus. J. Virol. 64:1990;1920-1926.
2. Allain F. H.-T., Gubser C. C., Howe P. W. A., Nagai K., Neuhaus D., Varani G. Specificity of ribonucleoprotein interaction determined by RNA folding during complex formation. Nature. 380:1996;646-650.
3. Anderson R., Wong F. Membrane and phospholipid binding by murine coronaviral nucleocapsid N protein. Virology. 194:1993;224-232.
4. Armstrong J., Smeekens S., Rottier P. J. M. Sequence of the Nucleocapsid gene from murine coronavirus MHV-A59. Nucleic Acids Res. 11:1983;883-891.
5. Baric R. S., Nelson G. W., Fleming J. O., Deans R. J., Keck J. G., Casteel N., Stohlman S. A. Interactions between coronavirus nucleocapsid protein and viral RNAs: Implications for viral transcription. J. Virol. 62:1988;4280-4287.
6. Beck J., Nassal M. Sequence- and structure-specific determinantsin the interaction between the RNA encapsidation signal and reverse transcriptase of avian hepatitis B viruses. J. Virol. 71:1997;4971-4980.
7. Berkowitz R. D., Ohagen A., Hoglund S., Goff S. P. Retroviral nucleocapsid domains mediate the specific recognition of genomic viral RNAs by chimeric gag polyproteins during RNA packagingin vivo. J. Virol. 69:1995;6445-6456.
8. Bos E. C. W., Luytjes W., Meulen van der H., Koerten H. K., Spaan W. J. M. The production of recombinant infectious DI-particles of a murine coronavirus in the absence of helper virus. Virology. 218:1996;52-60.
9. Bos E. C. W., Dobbe J., Luytjes W., Spaan W. J. M. A subgenomic mRNA transcript of the coronavirus mouse hepatitis virus strain A59 defective interfering (DI) RNA is packaged when it contains the DI packaging signal. J. Virol. 71:1997;5684-5687.
10. P. J. Bredenbeek, 1990, Nucleic Acid Domains and Proteins Involved in the Replication of Coronaviruses, University of Utrecht, Utrecht, The Netherlands.
11. Burd C. G., Dreyfuss G. Conserved structures and diversity of functions of RNA-binding proteins. Science. 265:1994;615-621.
12. Dignam J. D., Lebowitz R. M., Roeder R. G. Acurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei. Nucleic Acids Res. 11:1983;1475-1489.
13. Draper D. E. Protein-RNA recognition. Annu. Rev. Biochem. 64:1995;593-620.
14. Dubois-Dalcq M. E., Doller E. W., Haspel M. V., Holmes K. V. Cell tropism and expression of mouse hepatitis viruses (MHV) in mouse spinal cord cultures. Virology. 119:1982;317-331.
15. Dupraz P., Spahr P. F. Specificity of Rous sarcoma virus nucleocapsid protein in genomic RNA packaging. J. Virol. 66:1992;4662-4670.
16. Fischer F., Peng D., Hingley S. T., Weiss S. R., Masters P. S. The internal open reading frame within the nucleocapsid gene of mouse hepatitis virus encodes a structural protein that is not essential for viral replication. J. Virol. 71:1997;996-1003.
17. Fosmire J. A., Hwang K., Makino S. Identification and characterization of a coronavirus packaging signal. J. Virol. 66:1992;3522-3530.
18. Holmes K. V. Fundamental Virology. 1991;Raven Press, New York. p. 471-486.
19. Holmes K. V., Behnke J. N. Evolution of a coronavirus during persistent infectionin vitro. Adv. Exp. Med. Biol. 142:1981;287-299.
20. Lai M. M. C., Baric R. S., Brayton P. R., Stohlman S. A. Characterization of leader RNAsequences on the virion and mRNAs of mouse hepatitis virus, a cytoplasmic RNA virus. Proc. Natl. Acad. Sci. USA. 81:1984;3626-3630.
21. Laude H., Masters P. S. Siddell S. G. The Coronaviridae. 1995;141-163 Plenum Press, New York.
22. Lazinski D., Gradzielska E., Das A. Sequence specific recognition of RNA hairpins by bacteriophage antiterminators requires a conserved arginine-rich motif. Cell. 59:1989;207-215.
23. Luytjes W. Siddell S. G. The Coronaviridae. 1995;33-54 Plenum, New York.
24. Luytjes W., Gerritsma H., Bos E. C. W., Spaan W. J. M. Characterisation of two temperature-sensitive mutants of coronavirus mouse hepatitis virus strain A59 with maturation defects in the spike protein. J. Virol. 71:1997;949-955.
25. MacNaughton M. R., Davies H. A., Nermut M. V. Ribonucleoprotein-like structures from coronavirus particles. J. Gen. Virol. 39:1978;545-549.
26. Mahondas D. V., Dales S. Endosomal association of a protein phosphatase with high dephosphorylation activity against a coronavirus nucleocapsid protein. FEBS Lett. 282:1991;419-424.
27. Makino S., Shieh C., Soe L. H., Baker S. C., Lai M. M. C. Primary structure and translation of a defective interfering RNA of murine coronavirus. Virology. 166:1988;1-11.
28. Masters P. S. Localization of an RNA-binding domain in the nucleocapsid protein of the coronavirus mouse hepatitis virus. Arch. Virol. 125:1992;141-160.
29. Most R. G. v. d., Bredenbeek P. J., Spaan W. J. M. A domain at the 3′ end of the polymerase gene is essential for encapsidation of coronavirus defective interfering RNAs. J. Virol. 65:1991;3219-3226.
30. Murphy F. A., Fauquet C. M., Bishop D. H. L., Ghabrial S. A., Jarvis A. W., Martinelli G. P., Mayo M. A., Summers M. D. Virus Taxonomy, Classification and Nomenclature of Viruses. 1995;Springer-Verlag, New York.
31. Nelson G. W., Stohlman S. A. Localization of the RNA-binding domain of mouse hepatitis virus nucleocapsid protein. J. Gen. Virol. 74:1993;1975-1979.
32. Owen K. E., Kuhn R. J. Identification of a region in the sindbis virus nucleocapsid protein that is involved in specificity of RNA encapsidation. J. Virol. 70:1996;2757-2763.
33. Parker M. M., Masters P. S. Sequence comparison of the N genes of five strains of the coronavirus mouse hepatitis virus suggests a three domain structure for the nucleocapsid protein. Virology. 179:1990;463-468.
34. Pugatsch T., Stacey D. W. Identification of a sequence likely to be required for avian retroviral packaging. Virology. 128:1983;505-511.
35. Risco C., Anton I. M., Enjuanes L., Carrascosa J. L. The transmissible gastroenteritis coronavirus contains a spherical core shell consisting of M and N proteins. J. Virol. 70:1996;4773-4777.
36. Sambrook J., Fritsch E. F., Maniatis T. Molecular Cloning: A Laboratory Manual. 1989;Cold Spring Harbor Laboratory Press, Cold Spring Harbor.
37. Schlesinger S., Makino S., Linial M. L. Cistrans. Semin. Virol. 5:1994;39-49.
38. Snijder E. J., Wassenaar A. L. M., Dinten L. C. v., Spaan W. J. M., Gorbalenya A. E. The arterivirus Nsp4 protease is the prototype of a novel group of chymotrypsin-like enzymes, the 3C-like serine proteases. J. Biol. Chem. 271:1996;4864-4871.
39. Sorge J., Ricci W., Hughes S. H. cis. J. Virol. 48:1983;667-675.
40. Spaan W. J. M., Rottier P. J. M., Horzinek M. C., Van der Zeijst B. A. M. Isolation and identification of virus-specific mRNAs in cells infected with mouse hepatitis virus (MHV-A59). Virology. 108:1981;424-434.
41. Spaan W. J. M., Delius H., Skinner M. A., Armstrong J., Rottier P. J. M., Smeekens S., Van der Zeijst B. A. M., Siddell S. G. Coronavirus mRNA synthesis involves fusion of non-contiguous sequences. EMBO. J. 2:1983;1839-1844.
42. Spaan W. J. M., Cavanagh D., Horzinek M. C. Coronaviruses: structure and genome expression. J. Gen. Virol. 69:1988;2939-2952.
43. Stohlman S. A., Fleming J. O., Patton C. D., Lai M. M. C. Synthesis and subcellular localization of the murine coronavirus nucleocapsid protein. Virology. 130:1983;527-532.
44. Stohlman S. A., Baric R. S., Nelson G. W., Soe L. H., Welter L. M., Deans R. J. Specific interaction between coronavirus leader RNA and nucleocapsid protein. J. Virol. 62:1988;4288-4295.
45. Stohlman S. A., Lai M. M. C. Phosphoproteins of murine hepatitis viruses. J. Virol. 32:1979;672-675.
46. Strauss J. H., Strauss E. G. The alphaviruses: gene expression, replication, and evolution [published erratum appears inMicrobiol. Rev.,58. Microbiol. Rev. 58:1994;491-562.
47. Sturman L. S., Holmes K. V., Behnke J. Isolation of coronavirus envelope glycoproteins and interaction with the viral nucleocapsid. J. Virol. 33:1980;449-462.
48. Talbot P. J., Buchmeier M. J. Antigenic variation among murine coronaviruses: Evidence for polymorphism on the peplomer glycoprotein, E2. Virus Res. 2:1985;317-328.
49. Vennema H., Godeke G.-J., Rossen J. W. A., Voorhout W. F., Horzinek M. C., Opstelten D.-J. E., Rottier P. J. M. Nucleocapsid-independent assembly of coronavirus-like particles by co-expression of viral envelope protein genes. EMBO J. 15:1996;2020-2028.
50. Weis B., Nitschko H., Ghattas I., Schlesinger S. Evidence for specificity in the encapsidation of Sindbis virus RNAs. J. Virol. 63:1989;5310-5318.
51. Witherell G. W., Gott J. M., Uhlenbeck O. C. Specific interaction between RNA phage coat proteins and RNA. Prog. Nucleic Acid Res. Mol. Biol. 40:1991;185-220.
52. Woo K., Joo M., Narayanan K., Kim K. H., Makino S. Murine coronavirus packaging signal confers packaging to nonviral RNA. J. Virol. 71:1997;824-827.
53. Zhang Y., Barklis E. Nucleocapsid protein effects on the specificity of retrovirus RNA encapsidation. J. Virol. 69:1995;5716-5722.
54. Zhou M., Williams A. K., Chung S., Wang L., Collisson E. W. The infectious bronchitis virus nucleocapsid protein binds RNA sequences in the 3′ terminus of the genome. Virology. 217:1997;191-199.