Selection of carbonic anhydrase variants displayed on phage: Aromatic residues in zinc binding site enhance metal affinity and equilibration kinetics

Journal of Biological Chemistry

Volumn 272, Issue 33, 1997, Pages 20364-20372

  Hunt, Jennifer A ^a   Fierke, Carol A ^a  

^a DUKE UNIVERSITY MEDICAL CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CARBONATE DEHYDRATASE;

ARTICLE; BACTERIOPHAGE; BINDING AFFINITY; BINDING SITE; ENZYME ACTIVE SITE; HYDROPHOBICITY; NONHUMAN; PRIORITY JOURNAL; STRUCTURE ACTIVITY RELATION;

BACTERIOPHAGES; BINDING SITES; CARBONIC ANHYDRASES; STRUCTURE-ACTIVITY RELATIONSHIP; ZINC;

EID: 0030843294     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.272.33.20364     Document Type: Article

References (68)

1. Hellinga, H. W. (1996) Curr. Opin. Biotechnol. 7, 437-441
2. Tainer, J. A., Roberts, V. A., and Getzoff, E. D. (1992) Curr. Opin. Biotechnol. 3, 378-387
3. Higaki, J. N., Fletterick, R. J., and Craik, C. S. (1992) Trends Biochem. Sci. 17, 100-104
4. Roberts, V. A., Iverson, B. L., Iverson, S. A., Benkovic, S. J., Lerner, R. A., Getzoff, E. D., and Tainer, J. A. (1990) Proc. Natl. Acad Sci. U. S. A. 87, 6654-6658
5. Muller, H. N., and Skerra, A. (1994) Biochemistry 33, 14126-14135
6. Vita, C., Roumestand, C., Toma, F., and Menez, A. (1995) Proc. Natl. Acad. Sci. U. S. A. 92, 6404-6408
7. Pessi, A., Bianchi, E., Crameri, A., Venturini, S., Tramontano, A., and Sollazo, M. (1993) Nature 362, 367-369
8. Handel, T., and DeGrado, W. F. (1990) J. Am. Chem. Soc. 112, 6710-6711
9. Regan, L., and Clarke, N. D. (1990) Biochemistry 29, 10878-10883
10. Christianson, D. W., and Fierke, C. A. (1996) Acc. Chem. Res. 29, 331-339
11. Hakansson, K., Carlsson, M., Svensson, L. A., and Liljas, A. (1992) J. Mol. Biol. 227, 1192-1204
12. Kiefer, L. L., Ippolito, J. A., Fierke, C. A., and Christianson, D. W. (1993) J. Am. Chem. Soc. 115, 12581-12582
13. Kiefer, L. L., and Fierke, C. A. (1994) Biochemistry 33, 15233-15240
14. Ippolito, J. A., and Christianson, D. W. (1994) Biochemistry 33, 15241-15249
15. Kiefer, L. L., Paterno, S. A., and Fierke, C. A. (1995) J. Am. Chem. Soc. 117, 6831-6837
16. Lesburg, C. A., and Christianson, D. W. (1995) J. Am. Chem. Soc. 117, 6838-6844
17. Huang, C. C., Lesburg, C. A., Kiefer, L. L., Fierke, C. A., and Christianson, D. W. (1996) Biochemistry 35, 3439-3446
18. Yamashita, M. M., Wesson, L., Eisenman, G., and Eisenberg, D. (1990) Proc. Natl. Acad. Sci. U. S. A. 87, 5648-5652
19. Marks, J. D., Hoogenboom, H. R., Griffiths, A. D., and Winter, G. (1992) J. Biol. Chem. 267, 16007-16010
20. Hawkins, R. E., Russell, S. J., and Winter, G. (1992) J. Mol. Biol. 226, 889-896
21. Soumillion, P., Jespers, L., Bouchet, M., Marchand-Brynaert, J., Winter, G., and Fastrez, J. (1994) J. Mol. Biol. 237, 415-422
22. Corey, D. R., Shiau, A. K., Yang, Q., Janowski, B. A., and Craik, C. S. (1993) Gene (Amst.) 128, 129-134
23. McCafferty, J., Jackson, R. H., and Chiswell, D. (1991) Protein Eng. 4, 955-961
24. Thompson, R. B., Ge, Z., Patchan, M. W., and Fierke, C. A. (1996) J. Biomed. Optics 1, 131-137
25. Wells, J. A., Vasser, M., and Powers, D. B. (1985) Gene (Amst.) 34, 315-323
26. Sambrook, J., Fritsch, E. F., and Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual, Vol. 2., Cold Spring Harbor Press, Cold Spring Harbor, NY
27. Viera, J., and Messing, J. (1987) Methods Enzymol. 153, 3-11
28. Sanger, F., Nicklen, S., and Coulson, A. R. (1977) Proc. Natl. Acad. Sci. U. S. A. 74, 5463-5467
29. Osborne, W. R. A., and Tashian, R. E. (1975) Anal. Biochem. 64, 297-303
30. Fierke, C. A., Krebs, J. F., and Venters, R. A. (1991) in International Workshop on Carbonic Anhydrase (Botre, F., Gros, G., and Storey, B. T., eds) pp. 22-36, VCH, Weinheim, Germany
31. Studier, F. W., and Moffat, B. A. (1986) J. Mol. Biol. 189, 113-130
32. Nair, S. K., Calderone, T. L., Christianson, D. W., and Fierke, C. A. (1991) J. Biol. Chem. 266, 17320-17325
33. Krebs, J. F., and Fierke, C. A. (1993) J. Biol. Chem. 268, 948-954
34. Armstrong, J. McD., Myers, D. V., Verpoorte, J. A., and Edsall, J. T. (1966) J. Biol. Chem. 241, 5137-5149
35. Khalifah, R. G. (1971) J. Biol. Chem. 246, 2561-2573
36. Alexander, R. S., Kiefer, L. L., Fierke, C. A., and Christianson, D. W. (1993) Biochemistry 32, 1510-1518
37. Hunt, J. B., Neece, S. H., Schachman, H. K., and Ginsburg, A. (1984) J. Biol. Chem. 259, 14793-14803
38. Sillen, L. G., and Martell, A. E. (1964) Stability Constants of Metal Ion Complexes, Special Publication No. 17, p. 546, Chemical Society, London
39. Arkin, A. P., and Youvan, D. C. (1992) Bio/Technology 10, 297-300
40. Hutchison, C. A., III, Nordeen, S. K., Vogt, K., and Edgell, M. H. (1986) Proc. Natl. Acad. Sci. U. S. A. 83, 710-714
41. Eriksson, A. E., Kylsten, P. M., Jones, T. A., and Liljas, A. (1988) Proteins Struct. Funct. Genet. 4, 283-293
42. King, R. W., and Burgen, A. S. V. (1976) Proc. R. Soc. Lond. B 193, 107-125
43. Hunt, J. B., Rhee, M., and Storm, C. B. (1977) Anal. Biochem. 64, 297-303
44. Lindskog, S. (1982) Adv. Inorg. Biochem. 4, 115-170
45. Silverman, D. N., and Lindskog, S. (1988) Acc. Chem. Res. 21, 30-36
46. Fierke, C. A., Calderone, T. L., and Krebs, J. F. (1991) Biochemistry 30, 11054-11063
47. Zamyatnin, A. A. (1972) Prog. Biophys. Mol. Biol. 24, 107-123
48. Fauchere, J. L., and Pliska, V. (1983) Eur. J. Med. Chem. 18, 369-375
49. Eisenberg, D., and McLachlan, A D. (1986) Nature 319, 199-203
50. Pocker, Y., and Beug, M. W. (1972) Biochemistry 11, 698-707
51. Krebs, J. F., Rana, F., Dluhy, R. A., and Fierke, C. A. (1993) Biochemistry 32, 4496-4505
52. Steiner, H., Jonsson, B. H., and Lindskog, S. (1975) Eur. J. Biochem. 59, 253-259
53. Riepe, M. E., and Wang, J. H. (1968) J. Biol. Chem. 243, 2779-2787
54. Kumar, K., King, R. W., and Carey, P. R. (1976) Biochemistry 15, 2195-2202
55. Rowlett, R. S., and Silverman, D. N. (1982) J. Am. Chem. Soc. 104, 6737-6741
56. Ren, X., Tu, C., Laipis, P. J., and Silverman, D. N. (1995) Biochemistry 34, 8492-8498
57. Silverman, D. N., Tu, C., Chen, X., Tanhauser, S. M., Kresge, A. J., and Laipis, P. J. (1993) Biochemistry 32, 10757-10762
58. Jackman, J. E., Merz, K. M., Jr., and Fierke, C. A. (1996) Biochemistry 51, 16421-16428
59. Tamai, S., Waheed, A., Cody, L. B., and Sly, W. S. (1996) Proc. Natl. Acad. Sci. U. S. A. 93, 13647-13652
60. Rebar, E. J., and Pabo, C. O. (1994) Science 263, 671-673
61. Tang, Y., Jiang, N., Parakh, C., and Hilvert, D. (1996) J. Biol. Chem. 271, 15682-15686
62. Dodgson, S. J. (1991) in The Carbonic Anhydrases: Cellular Physiology and Molecular Genetics (Dodgson, S. J., Tashian, R. E., Gros, G., and Carter, N. D., eds) Plenum Publishing Corp., New York
63. Kraulis, P. (1991) J. Appl. Crystallogr. 24, 946-950
64. Eigen, M., and Hammes, G. G. (1963) Adv. Enzymol. 25, 1-38
65. Holyer, R. H., Hubbard, C. D., Kettle, S. F. A., and Wilkins, R. G. (1965) J. Inorg. Chem. 4, 929-935
66. Holyer, R. H., Hubbard, C. D., Kettle, S. F. A., and Wilkins, R. G. (1966) J. Inorg. Chem. 5, 622-625
67. Hewett-Emmett, D., and Tashian, R. E. (1996) Mol. Phylogenet. Evol. 5, 50-77
68. Thompson, R. B., and Patchan, M. W. (1995) Anal. Biochem. 227, 123-128