SNF2β-BRG1 is essential for the viability of F9 murine embryonal carcinoma cells

Molecular and Cellular Biology

Volumn 17, Issue 10, 1997, Pages 5976-5986

  Sumi Ichinose, Chiho ^a,b   Ichinose, Hiroshi ^a,c   Metzger, Daniel ^a   Chambon, Pierre ^a  

^a INSTITUT DE GÉNÉTIQUE ET DE BIOLOGIE MOLÉCULAIRE ET CELLULAIRE   (France)

^b FUJITA HEALTH UNIVERSITY SCHOOL OF MEDICINE   (Japan)

^c FUJITA HEALTH UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

RETINOID X RECEPTOR; DNA BINDING PROTEIN; HELICASE; NUCLEAR PROTEIN; RETINOIC ACID; RETINOIC ACID RECEPTOR; SMARCA2 PROTEIN, HUMAN; SMARCA2 PROTEIN, MOUSE; SMARCA4 PROTEIN, HUMAN; SMARCA4 PROTEIN, MOUSE; TRANSCRIPTION FACTOR;

ALLELE; ANIMAL CELL; ARTICLE; CELL PROLIFERATION; CELL VIABILITY; DROSOPHILA; EMBRYO CELL; GENE EXPRESSION; GENETIC TRANSCRIPTION; NONHUMAN; PRIORITY JOURNAL; SEQUENCE HOMOLOGY; SIGNAL TRANSDUCTION; STRUCTURE ACTIVITY RELATION; AMINO ACID SEQUENCE; ANIMAL; CANCER STEM CELL; CELL DIFFERENTIATION; CELL DIVISION; CELL SURVIVAL; CYTOLOGY; GENE TARGETING; GENETIC RECOMBINATION; GENETICS; HUMAN; MOLECULAR CLONING; MOLECULAR GENETICS; MOUSE; NUCLEOTIDE SEQUENCE; PHYSIOLOGY; RESTRICTION MAPPING; TRANSACTIVATION;

ANIMALIA; MAMMALIA; MURINAE;

ALLELES; AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; CELL DIFFERENTIATION; CELL DIVISION; CELL SURVIVAL; CLONING, MOLECULAR; DNA HELICASES; DNA-BINDING PROTEINS; GENE TARGETING; HUMANS; MICE; MOLECULAR SEQUENCE DATA; NUCLEAR PROTEINS; RECEPTORS, RETINOIC ACID; RECOMBINATION, GENETIC; RESTRICTION MAPPING; RETINOID X RECEPTORS; SIGNAL TRANSDUCTION; TRANS-ACTIVATION (GENETICS); TRANSCRIPTION FACTORS; TRETINOIN; TUMOR STEM CELLS;

EID: 0030610563     PISSN: 02707306     EISSN: None     Source Type: Journal    
DOI: 10.1128/mcb.17.10.5976     Document Type: Article

References (62)

1. Ali, S., Y. Lutz, J. P. Bellocq, M. P. Chenard-Neu, N. Rouyer, and D. Metzger. 1993. Production and characterization of monoclonal antibodies recognising defined regions of the human oestrogen receptor. Hybridoma 12:391-405.
2. Bouillet, P., M. Oulad-Abdelghani, S. Vicaire, J.-M. Garnier, B. Schuhbaur, P. Dollé, and P. Chambon. 1995. Efficient cloning of cDNAs of retinoic acid-responsive genes in P19 embryonal carcinoma cells and characterization of a novel mouse gene, Stra1 (mouse LERK-2/Eplg2). Dev. Biol. 170:420-433.
3. Boylan, J., D. Lohnes, R. Taneja, P. Chambon, and L. J. Gudas. 1993. Loss of RARγ function by gene disruption results in aberrant Hoxa-1 expression and differentiation upon retinoic acid treatment. Proc. Natl. Acad. Sci. USA 90:9601-9605.
4. Boylan, J., T. Lufkin, C. C. Achkar, R. Taneja, P. Chambon, and L. J. Gudas. 1995. Targeted disruption of retinoic acid receptor α (RARα) and RARγ results in receptor-specific alterations in retinoic acid-mediated differentiation and retinoic acid metabolism. Mol. Cell. Biol. 15:843-851.
5. Cairns, B. R., N. L. Henry, and R. D. Kornberg. 1996. TFG3/TAF30/ANC1, a component of the yeast SWI/SNF complex that is similar to the leukemogenic proteins ENL and AF-9. Mol. Cell. Biol. 16:3308-3316.
6. Cairns, B. R., R. S. Levinson, K. R. Yamamoto, and R. D. Kornberg. 1996. Essential role of Swp73p in the function of yeast Swi/Snf complex. Genes Dev. 10:2131-2144.
7. Cairns, B. R., Y. Lorch, Y. Li, M. Zhang, L. Lacomis, H. Erdjument-Bromage, P. Tempst, J. Du, B. Laurent, and R. D. Kornberg. 1996. RSC. an essential, abundant chromatin-remodeling complex. Cell 87:1249-1260.
8. Carlson, M., and B. C. Laurent. 1994. The SNF/SWI family of global transcriptional activators. Curr. Opin. Cell Biol. 6:396-402.
9. Chambon, P. 1996. A decade of molecular biology of retinoic acid receptors. FASEB J. 10:940-954.
10. Chiba, H., M. Mimatsu, A. Nomoto, and H. Kato. 1994. Two human homologues of Saccharomyces cerevisiae SWI2/SNF2 and Drosophila brahma are transcriptional coactivators cooperating with the estrogen receptor and the retinoic acid receptor. Nucleic Acids Res. 22:1815-1820.
11. Clifford, J., H. Chiba, D. Sobieszczuk, D. Metzger, and P. Chambon. 1996. RXRα-null F9 embryonal carcinoma cells are resistant to the differentiation, anti-proliferative and apoptotic effects of retinoids. EMBO J. 15:4142-4155.
12. Côté, J., J. Quinn, J. L. Workman, and C. L. Peterson. 1994. Stimulation of GAL4 derivative binding to nucleosomal DNA by the yeast SWI/SNF complex. Science 265:53-60.
13. Dingwall, A. K., S. J. Beck, C. M. McCallum, J. W. Tamkun, G. W. Kalpana, S. P. Geoff, and M. P. Scott. 1995. The Drosophila snr1 and brm proteins are related to yeast SWI/SNF proteins and are components of a large protein complex. Mol. Biol. Cell 6:777-791.
14. Dunaief, J. L., B. E. Strober, S. Guha, P. A. Khavari, K. Alin, J. Luban, M. Begemann, G. R. Crabtree, and S. P. Goff. 1994. The retinoblastoma protein and BRG1 form a complex and cooperate to induce cell cycle arrest. Cell 79:119-130.
15. Elfling, L. K., R. Deuring, C. M. McCallum, C. L. Peterson, and J. W. Tamkun. 1994. Identification and characterization of Drosophila relatives of the yeast transcriptional activator SNF2/SWI2. Mol. Cell. Biol. 14:2225-2234.
16. Elgin, S. R. C. 1996. Heterochromatin and gene regulation in Drosophila. Curr. Opin. Genet. Dev. 6:193-202.
17. Grunstein, M. 1990. Histone function in transcription. Annu. Rev. Cell Biol. 6:643-678.
18. Ichinose, H., J.-M. Garnier, P. Chambon, and R. Losson. 1997. Ligand-dependent interaction between the estrogen receptor and the human homologues of SWI2/SNF2. Gene 188:95-100.
19. 18a. Ichinose, H., and Y. Lutz. Unpublished data.
20. Imbalzano, A. N., H. Kwon, M. R. Green, and R. E. Kingston. 1994. Facilitated binding of TATA-binding protein to nucleosomal DNA. Nature 370: 481-485.
21. Imbalzano, A. N., G. R. Schnitzler, and R. E. Kingston. 1996. Nucleosome disruption by human SWI/SNF is maintained in the absence of continued ATP hydrolysis. J. Biol. Chem. 271:20726-20733.
22. Khavari, P. A., C. L. Peterson, J. W. Tamukun, D. B. Mendel, and G. R. Crabtree. 1993. BRG1 contains a conserved domain of the SWI2/SNF2 family necessary for normal mitotic growth and transcription. Nature 366: 170-174.
23. Kingston, R. E., C. A. Bunker, and A. N. Imbalzano. 1996. Repression and activation by multiprotein complexes that alter chromatin structure. Genes Dev. 10:905-920.
24. Kuchler, R. 1977. Development of animal cell populations in vitro, p. 90-113. In R. Kuchler (ed.), Biochemical methods in cell culture and virology. Dowden. Hutchinson and Ross Inc., Stroudsburg, Pa.
25. Kwon, H., A. N. Imbalzano, P. A. Khavari, R. E. Kingston, and M. R. Green. 1994. Nucleosomal disruption and enhancement of activator binding by a human SWI/SNF complex. Nature 370:477-481.
26. Laurent, B. C., and M. Carlson. 1992. Yeast SNF2/SWI2, SNF5 and SNF6 proteins function coordinately with the gene-specific transcriptional activators GAL4 and Bicoid. Genes Dev. 6:1707-1715.
27. Laurent, B. C., I. Treich, and M. Carlson. 1993. The yeast SNF2/SWI2 protein has DNA-stimulated ATPase activity required for transcriptional activation. Genes Dev. 7:583-591.
28. Le Douarin, B., A. L. Nielsen, J. M. Garnier, H. Ichinose, F. Jeanmougin, R. Losson, and P. Chambon. 1996. A possible involvement of TIF1α and TIFβ in epigenetic control of transcription by nuclear receptors. EMBO J. 15: 6701-6715.
29. Metzger, D., J. Clifford, H. Chiba, and P. Chambon. 1995. Conditional site-specific recombination in mammalian cells using a ligand-dependent chimeric Cre recombinase. Proc. Natl. Acad. Sci. USA 92:6991-6995.
30. Moehrle, A., and P. Paro. 1994. Spreading the silence: epigenetic transcriptional regulation during Drosophila development. Dev. Genet. 15:478-484.
31. Muchardt, C., and M. Yaniv. 1993. A human homologue of Saccharomyces cerevisiae SNF2/SWI2 and Drosophila brm genes potentiates transcriptional activation by the glucocorticoid receptor. EMBO J. 12:4279-4290.
32. Muchardt, C., J.-C. Reyes, B. Bourachot, E. Legouy, and M. Yaniv. 1996. The hbrm and BRG-1 proteins, component of the human SNF/SWI complex, are phosphorylated and excluded from the condensed chromosomes during mitosis. EMBO J. 15:3394-3402.
33. Okabe, I., L. C. Bailey, O. Attree, S. Srinivasan, J. M. Perkel, B. C. Laurent, M. Carlson, D. L. Nelson, and R. L. Nussbaum. 1992. Cloning of human and bovine homologs of SNF2/SWI2: a global activator of transcription in yeast S. cerevisiae. Nucleic Acids Res. 20:4649-4655.
34. Orlando, V., and R. Paro. 1995. Chromatin multiprotein complexes involved in the maintenance of transcription patterns. Curr. Opin. Genet. Dev. 5:174-175.
35. Ostlund Farrants, A. K., P. Blomquist, H. Kwon, and O. Wrange. 1997. Glucocorticoid receptor-glucocorticoid response element binding stimulates nucleosome disruption by the SWI/SNF complex. Mol. Cell. Biol. 17:895-905.
36. Owen-Hughes, T., R. T. Utley, J. Côté, C. L. Peterson, and J. L. Workman. 1996. Persistent site-specific remodeling of a nucleosome array by transient action of the SWI/SNF complex. Science 273:513-516.
37. Paranjape, S. M., R. T. Kamakura, and J. T. Kadonaga. 1994. Role of chromatin structure in the regulation of transcription by RNA polymerase II. Annu. Rev. Biochem. 63:265-297.
38. Pazin, M. J., R. T. Kamakaka, and J. T. Kadonaga. 1994. ATP-dependent nucleosome reconfiguration and transcriptional activation from preassembled chromatin templates. Science 266:2007-2011.
39. Peterson, C. L. 1996. Multiple SWItches to turn on chromatin? Curr. Opin. Genet. Dev. 6:171-175.
40. Peterson, C. L., and I. Herskowitz. 1992. Characterization of the yeast SWI1. SWI2, and SWI3 genes, which encode a global activator of transcription. Cell 68:573-583.
41. Peterson, C. L., and W. Tamkun. 1995. The SWI-SNF complex: a chromatin remodelling machine? Trends Biochem. Sci. 20:143-146.
42. Quinn, J., A. M. Freyberg, R. W. Ganster, M. C. Schmidt, and C. L. Peterson. 1996. DNA-binding properties of the yeast SWI/SNF complex. Nature 379:844-847.
43. Randazzo, F. M., P. Khavari, G. Crabtree, J. Tamkun, and J. Rossant. 1994. brg-1: a putative murine homologue of the Drosophila brahma gene, a homeotic gene regulator. Dev. Biol. 161:229-242.
44. Richmond, E., and C. L. Peterson. 1996. Functional analysis of the DNA-stimulated ATPase domain of yeast SWI2/SNF2. Nucleic Acids Res. 24: 3685-3692.
45. Singh, P., J. Coe, and W. Hong. 1995. A role for retinoblastoma protein in potentiating transcriptional activation by the glucocorticoid receptor. Nature 374:562-565.
46. Strickland, S., and V. Mahdavi. 1978. The induction of differentiation in teratocarcinoma stem cells by retinoic acid. Cell 15:393-403.
47. Strickland, S., K. K. Smith, and K. R. Marotti. 1980. Hormonal induction of differentiation in teratocarcinoma stem cells: generation of parietal endoderm by retinoic acid and dibutyryl cAMP. Cell 21:347-355.
48. Strober, B. E., J. L. Dunaief, S. Guha, and S. P. Goff. 1996. Functional interactions between the hBRM/hBRG1 transcriptional activators and the pRB family of proteins. Mol. Cell. Biol. 16:1576-1583.
49. Tamkun, J. W., R. Deuring, M. P. Scott, M. Kissinger, A. M. Pattatucci, T. C. Kaufman, and J. A. Kennison. 1992. brahma: a regulator of Drosophila homeotic genes structurally related to the yeast transcriptional activator SNF2/SWI2. Cell 68:561-572.
50. te Riele, H., E. R. Maandag, A. Clarke, M. Hooper, and A. Berns. 1990. Consecutive inactivation of both alleles of the pim-1 proto-oncogene by homologous recombination in embryonic stem cells. Nature 348:649-651.
51. Tsukiyama, T., and C. Wu. 1995. Purification and properties of an ATP-dependent nucleosome remodeling factor. Cell 83:1011-1020.
52. Tsukiyama, T., C. Daniel, J. Tamkun, and C. Wu. 1995. ISWI, a member of the SWI2/SNF2 ATPase family, encodes the 140 kDa subunit of the nucleosome remodeling factor. Cell 83:1021-1026.
53. 51a. vom Baur, E. Unpublished data.
54. 51b. vom Baur, E., and Y. Lutz. Unpublished data.
55. Wall, G., P. D. Varga-Weisz, R. Sandaltzopoulos, and P. B. Becker. 1995. Chromatin remodeling by GAGA factor and heat shock factor at the hypersensitive Drosophila hsp26 promoter in vitro. EMBO J. 14:1727-1736.
56. Wang, W., J. Côté, Y. Xue, S. Zhou, P. A. Khavari, S. R. Biggar, C. Muchardt, G. Kalpana, S. P. Goff, M. Yaniv, J. L. Workman, and G. R. Crabtree. 1996. Purification and biochemical heterogeneity of the mammalian SWI-SNF complex. EMBO J. 15:5370-5382.
57. Wang, W., Y. Xue, S. Zhou, A. Kuo, B. R. Cairns, R. Tjian, and G. R. Crabtree. 1996. Diversity and specialization of mammalian SWI/SNF complex. Genes Dev. 10:2117-2130.
58. Winston, F., and M. Carlson. 1992. Yeast SNF/SWI transcriptional activators and the SPT/SIN chromatin connection. Trends Genet. 8:387-391.
59. Wolffe, A. P. 1994. Nucleosome positioning and modification: chromatin structures that potentiate transcription. Trends Biochem. Sci. 19:240-244.
60. Wolffe, A. P. 1994. Transcription in tune with histones. Cell 77:13-16.
61. Xiao, J. H., I. Davidson, H. Matthes, J. M. Garnier, and P. Chambon. 1991. Cloning, expression, and transcriptional properties of the human enhancer factor TEF-1. Cell 65:551-568.
62. Yoshinaga, S. K., C. L. Peterson, I. Herskowitz, and K. R. Yamamoto. 1991. Roles of SWI1, SWI2, and SWI3 proteins for transcriptional enhancement by steroid receptors. Science 258:1598-1604.