Catalytic antibody structures: An early assessment

Israel Journal of Chemistry

Volumn 36, Issue 2, 1996, Pages 133-142

  Haynes, Matthew R ^a   Heine, Andreas ^a   Wilson, Ian A ^a  

^a SCRIPPS RESEARCH INSTITUTE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 0030359818     PISSN: 00212148     EISSN: None     Source Type: Journal    
DOI: 10.1002/ijch.199600019     Document Type: Article

References (80)

1. (a) Haldane, J.B.S. Enzymes; Longmans, Green and Co.: London, 1930.
2. (b) Pauling, L. Chem. Eng. News 1946, 24, 1375.
3. (c) Pauling, L. Am. Sci. 1948, 36, 51.
4. (a) Jencks, W P. Catalysis in Chemistry and Enzymology: McGraw-Hill: New York, 1969.
5. (b) Jencks, W.P Adv. Enzymol. 1975, 43, 219.
6. (a) Pollack, S.J.; Jacobs, J.W.; Schultz, P.G. Science 1986, 234, 1570.
7. (b) Tramontano, A.; Janda, K.D.; Lerner, R.A. Proc. Natl. Acad. Sci. U.S.A. 1986, 83, 6736.
8. (c) Tramontane, A.; Janda, K.D.; Lerner, R.A. Science 1986, 234, 1566.
9. (a) Schultz, P.G. Science 1988, 240, 426.
10. (b) Lerner, R.A.; Benkovic, S.J.; Schultz, P.G. Science 1991, 252, 659.
11. (c) Schultz, P.G.; Lerner, R.A. Science 1995, 269, 1835.
12. (a) Janda, K.D.; Shevlin, C.G.; Lerner, R.A. Science 1993, 259, 490.
13. (b) Cravatt, B.F.; Ashley, J.A.; Janda, K.D.; Boger, D.L.; Lerner, R.A. J. Am. Chem. Soc. 1994, 116, 6013.
14. (a) Hilvert, D.; Hill, K.W.; Nared, K.D.; Auditor, M.T. J. Am. Chem. Soc. 1989, 111, 9261.
15. (b) Braisted, A.C.; Schultz, P.G. J. Am. Chem. Soc. 1990, 112, 7430.
16. (c) Li, T.; Janda, K.D.; Ashley, J.A.; Lerner, R.A. Science 1994, 264, 1289.
17. Källberg, E.; Jainandunsing, S.; Gray, D.; Leanderson, T. Science 1996, 271, 1285.
18. Sander, C. Curr. Opin. Struct. Biol. 1991, 1, 630.
19. Fersht, A.; Enzyme Structure and Mechanism; W.H. Freeman and Co.: New York, 1977.
20. (a) Wolfenden, R. Nature 1969, 223, 704.
21. (b) Wolfenden, R. Acc. Chem. Res. 1972, 5, 10.
22. (c) Wolfenden, R. Mol. Cell. Biochem. 1974, 3, 207.
23. (a) Alt, F.W.; Blackwell, K.T.; Yancopoulos, G.D. Science 1987, 238, 1079.
24. (b) Rajewski, K.; Förster, I.; Cumano, A. Science 1987, 238, 1088.
25. (c) French, D.L.; Laskov, R.; Scharf, M.D. Science 1989, 244, 1152.
26. Amzel, L.M.; Poljak, R.J. Annu. Rev. Biochem. 1979, 48, 961.
27. Colman, P.M. Adv. Immunol. 1988, 43, 99.
28. Davies, D.R., Padlan, E.A.; Sheriff, S. Annu. Rev Biochem. 1990, 59, 439.
29. Wilson, I.A.; Rini, J.M.; Fremont, D.H.; Fieser, G.G.; Stura, E.A. Methods Enzymol. 1991, 203, 153.
30. (a) Wilson, I.A.; Stanfield, R.L. Curr. Opin. Struct. Biol. 1993, 3, 113.
31. (b) Wilson, I.A.; Stanfield, R.L. Curr. Opin. Struct. Biol. 1994, 4, 857.
32. (a) Chothia, C.; Lesk, A.M. J. Mol. Biol. 1987, 196, 901.
33. (b) Chothia, C.; Lesk, A.M.; Tramontano, A.; Levitt, M.; Smith-Gill, S.J.; Air. G.; Sheriff, S.; Padlan, E.A.; Davies, D.R.; Tulip, W.R.; Colman, P.M.; Spinelli, S.; Alzari, P.M.; Poljak, R.J. Nature 1989, 342, 877.
34. Kabat, E.A.; Wu, T.T. J. Immunol. 1991, 147, 1709.
35. (a) Bhat, T.N.; Bentley, G.A.; Boulot, G.; Greene, M.I.; Tello, D.; Dal'Acqua, W.; Souchon, H.; Schwarz, F.P.; Mariuzza, R.A.; Poljak, R.J. Proc. Natl. Acad. Sci. U.S.A. 1994, 91, 1089.
36. (b) Churchill, M.E.A.; Stura, E.A.; Pinilla, C.; Appel, J.R.; Houghton, R.A.; Kono, D.H.; Balderas, R.S.; Fieser, G.G.; Schulze-Gahmen, U.; Wilson, I.A. J. Mol. Biol. 1994, 241, 534.
37. (c) Guddat, L.W.; Shan, L.; Anchin, J.M.; Linthicum, D.S.; Edmundson, A.B. J. Mol. Biol. 1994, 236, 247.
38. (d) Hibbits, K.A.; Gill, D.S.; Wilson, R.C. Biochemistry 1994, 33, 3584.
39. (e) Ysern, X.; Fields, B.A.; Bhat, T.N.; Goldbaum, F.A.; Dall'acqua, W.; Schwarz, F.P.; Poljak, R.J.; Mariuzza, R.A. J. Mol. Biol. 1994, 238, 496.
40. (f) Cohen, G.H.; Sheriff, S.; Davies, D.R. Acta Cryst. 1996, D52, 315.
41. (a) Bhat, T.N.; Bentley, G.A.; Fischmann, T.O.; Boulot, G.; Poljak, R.J. Nature 1990, 347, 483.
42. (b) Stanfield, R.L.; Fieser, T.M.; Lerner, R.A.; Wilson, I.A. Science 1990, 248, 712.
43. (c) Herron, J.N.; He, X.M.; Ballard, D.W.; Blier, P.R.; Pace, P.E.; Bothwell, A.L.M.; Voss, E.W.; Edmundson, A.B. Proteins 1991, 11, 159.
44. (d) Arevalo, J.H.; Stura, E.A.; Taussig, M.J.; Wilson, I.A. J. Mol. Biol. 1993, 231, 103.
45. (e) Arevalo, J.H.; Taussig, M.J.; Wilson, I.A. Nature 1993, 365, 859.
46. (f) Stanfield, R.L.; Takimoto-Kamimura, M.; Rini, J.M.; Profy, A.T.; Wilson, I.A. Structure 1993, 1, 83.
47. (g) Arevalo, J.H.; Hassig, C.A.; Stura, E.A.; Sims, M.J.; Taussig, M.J.; Wilson, I.A. J. Mol. Biol. 1994, 241, 663.
48. Rini, J.M.; Schulze-Gahmen, U.; Wilson, I.A. Science 1992, 255, 959.
49. Davies, D.R.; Padlan, E.A. Curr. Biol. 1992, 2, 254.
50. Haynes, M.R.; Stura, E.A.; Hilvert, D.; Wilson, I.A. Science 1994, 263, 646.
51. Golinelli-Pimpaneau, B.; Gigant, B.; Bizebard, T.; Navaza, J.; Saludjian, P.; Zemel, R.; Tawfik, D.S.; Eshhar, Z.; Green, B.S.; Knossow, M. Structure 1994, 2, 175.
52. Zhou, G.W.; Guo, J.; Huang, W.; Fletterick, R.J.; Scanlan, T.S. Science 1994, 265, 1059.
53. Patten, P.A.; Gray, N.S.; Yang, P.L.; Marks, C.B., Wedemayer, G.J.; Boniface, J.J.; Stevens, R.C.; Schultz, P.G. Science 1996, 271, 1086.
54. Roberts, V.A.; Stewart, J.; Bcnkovic, S.J.; Geizoff, E.D. J. Mol. Biol. 1994, 235, 1098.
55. (a) Hilvert, D.; Carpenter, S.H.; Nared, K.D.; Auditor, M.T. Proc. Natl. Acad. Sci. U.S.A. 1988, 85, 4953.
56. (b) Hilvert, D.; Nared, K.D. J. Am. Chem. Soc. 1988, 110, 5593.
57. (a) Bartlett, P.A.; Johnson, C.R. J. Am. Chem. Soc. 1985, 107, 7792.
58. (b) Bartlett, P.A.; Nakagawa, Y.; Johnson, C.R.; Reich, S.H.; Luis, A. J. Org. Chem. 1988, 53, 3195.
59. Satow, Y.; Cohen, G.H.; Padlan, E.A.; Davies, D.R. J. Mol. Biol. 1986, 190, 593.
60. Herron, J.N.; He, X.M.; Mason, M.L.; Voss, E.W.; Edmundson, A.B. Proteins 1989, 5, 271.
61. Connolly, M.L. Science 1983, 221, 709.
62. Chook, Y.M.; Gray, J.V.; Ke, H.; Lipscomb, W.N. J. Mol. Biol. 1994, 240, 476.
63. Lee, A.Y.; Karplus, P.A.; Ganem, B.; Clardy, J. J. Am. Chem Soc. 1995, 117, 3627.
64. Lee, A.Y.; Stewart J.D.; Clardy, J.; Ganem, B. Chem. Biol. 1995, 2, 195.
65. Shin, J.A.; Hilvert, D. Bioorg. Med. Chem. Lett. 1994, 4, 2945.
66. (a) Gray, J.V.; Eren, D.; Knowles, J.R. Biochemistry 1990, 29, 8872.
67. (b) Gray, J.V.; Knowles, J.R. Biochemistry. 1994, 33, 9953.
68. (a) Blackburn, S. Enzyme Structure and Function; Dekker: New York, 1976.
69. (b) Kraut, J. Annu. Rev. Biochem. 1977, 46, 331.
70. (a) Padlan, E.A. Proteins 1990, 7, 112.
71. (b) Mian, I.S.; Bradwell, A.R.; Olson, A.J. J. Mol. Biol. 1991, 217, 133.
72. Tomlinson, I.M.; Walter, G.; Jones, P.T.; Dear, P.H.; Sonnhammer, E.L.L.; Winter, G. J. Mol. Biol. 1996, 256, 813.
73. Zemel, R. Ph.D. Thesis. Weizmann Institute of Science. Rehovot, Israel, 1993.
74. Janda, K.D.; Schloeder, D.; Benkovic, S.J.; Lerner, R.A. Science 1988, 247, 1188.
75. (a) Lewis, C.; Krämer, T.; Robinson, S.; Hilvert, D. Science 1991, 253, 1019.
76. (b) Tarasow, T.M.; Lewis, C.; Hilvert, D. J. Am. Chem. Soc. 1994, 116, 7959.
77. Thorn, S.N.; Daniels, R.G.; Auditor, M.T.; Hilvert, D. Nature 1995, 373, 228.
78. Reymond, J.-L.; Reber, J.-L.; Lerner, R.A. Angew. Chem., Int. Ed. Engl. 1994, 33, 475.
79. Janda, K.D.; Lo, C.-H.L.; Li, T.; Barbas, C.F.; Wirsching, P.; Lerner, R.A. Proc. Natl. Acad. Sci. U.S.A. 1994, 91, 2532.
80. Wagner, J.; Lerner, R.A.; Barbas, C.F. Science 1995, 270, 1797.