cpDNA-RFLP in Ceramium (Rhodophyta): Intraspecific polymorphism and species-level phylogeny

American Journal of Botany

Volumn 88, Issue 7, 2001, Pages 1209-1213

  Wattier, Rémi A ^b   Davidson, Alistair L ^b   Ward, Barbara A ^a,b   Maggs, Christine A ^b  

^a Dept of Agric and Rural Devmt ^*  (Ireland)

^b QUEEN'S UNIVERSITY BELFAST   (United Kingdom)

Author keywords

Ceramium; Intraspecific variation; Plastid DNA; Population genetics; Red 7lgae; RFLPs; Systematics

Indexed keywords

EID: 0010418790     PISSN: 00029122     EISSN: None     Source Type: Journal    
DOI: 10.2307/3558331     Document Type: Article

References (41)

1. BAIN, J. F., AND R. K. JANSEN. 1996. Numerous chloroplast DNA polymorphisms are shared among different populations and species in the aureoid Senecio (Packera) complex. Canadian Journal of Botany 74: 1719-1728.
2. BANKS, J. A., AND C. W. J. BIRKY. 1985 Chloroplast diversity is low in a wild plant, Lupinus texensis. Proceedings of the National Academy of Sciences, USA 82: 6950-6954.
3. BLOMSTER, J., E. M. HOEY, C. A. MAGGS, AND M. J. STANHOPE. 2000. Species-specific oligonucleotide probes for macroalgae: molecular discrimination of two marine fouling species of Enteromorpha (Ulvophyceae). Molecular Ecology 9: 177-186.
4. _, C. A. MAGGS, AND M. J. STANHOPE. 1998. Molecular and morphological analysis of Enteromorpha intestinalis and E. compressa (Chlorophyta) in the British Isles. Journal of Phycology 34: 319-340.
5. BRODIE, J., P. K. HAYES, G. L. BARKER. AND L. M. IRVINE. 1996. Molecular and morphological characters distinguishing two Porphyra species (Rhodophyta: Bangiophycidae). European Journal of Phycology 31: 303-308.
6. BYRNE, M., B. MACDONALD, AND D. COATES. 1999. Divergence in the chloroplast genome and nuclear rDNA of the rare Western Australian plant Lambertia orbifolia Gardner (Proteaceae). Molecular Ecology 8: 1789-1796.
7. CAHA, C. A., D. J. LEE, AND J. STUBBENDIECK. 1998. Organellar genetic diversity in Penstemon haydenii (Scrophulariaceae): an endangered plant species. American Journal of Botany 85: 1704-1709.
8. CHOPIN, T., C. J. BIRD, C. A. MURPHY, J. A. OSBORNE, M. U. PATWARY. AND J.-Y. FLOC'H. 1996. A molecular investigation of polymorphism in the North Atlantic red alga Chondrus crispus (Gigartinales). Phycological Research 44: 69-80.
9. DUMOLIN-LAPEGUE, S., M.-H. PEMONGE, AND R. J. PETIT. 1997. An enlarged set of consensus primers for the study of organelle DNA in plants. Molecular Ecology 6: 393-397.
10. ENNOS, R. A., W. T. SINCLAIR, X.-S. Hu, AND A. LANGDON. 1999. Using organelle markers to elucidate the history, ecology and evolution of plant populations. In P. M. Hollingsworth, R. M. Bateman, and R. J. Gornall [eds.], Molecular systematics and plant evolution, 1-19. Taylor and Francis, London, UK.
11. FERRIS, C., R. A. KING, R. VAINOLA, AND G. M. HEWITT. 1998. Chloroplast DNA recognizes three refugial sources of European oaks and suggests independent eastern and western immigrations to Finland. Heredity 80: 584-593.
12. FORCIOLI, D. P., P. SAUMITOU-LAPRADE, M. VALERO, P. VERNET, AND J. CUGUEN. 1998. Distribution of chloroplast DNA diversity within and among populations in gynodioecious Beta vulgaris ssp. maritima (Chenopodiaceae). Molecular Ecology 7: 1193-1204.
13. GOFF, L. J., AND A. W. COLEMAN. 1988. The use of plastid DNA restriction endonuclease patterns in delineating red algal species and populations. Journal of Phycology 24: 357-368.
14. _, L. LIDDLE, P. C. SILVA, M. VOYTEK, AND A. W. COLEMAN. 1992. Tracing species invasion in Codium, a siphonous green alga, using molecular tools. American Journal of Botany 79: 1279-1285.
15. GONZALEZ, M. A., R. MONTOYA, A. CANDIA, P. GOMEZ, AND M. CISTERNAS. 1996. Organellar DNA restriction fragment length polymorphism (RFLP) and nuclear random amplified polymorphic DNA (RAPD) analyses of morphotypes of Gracilaria (Gracilariales, Rhodophyta) from Chile. Hydrobiologia 326/327: 229-234.
16. HARDING, T. M., S. J. BRUNSFELD, R. S. FRITZ, M. MORGAN, AND C. M. ORIANS. 2000. Morphological and molecular evidence for hybridization and introgression in a willow (Salix) hybrid zone. Molecular Ecology 9: 9-24.
17. KIM, Y. D., AND R. K. JANSEN. 1998. Chloroplast DNA restriction site variation and phylogeny of the Berberidaceae. American Journal of Botany 85: 1766-1778.
18. KRON, K. A., L. M. GAWEN, AND M. CHASE. 1993. Evidence for introgression in azaleas (Rhododendron; Ericaceae): chloroplast DNA and morphological variation in a hybrid swarm on Stone Mountain, Georgia. American Journal of Botany 80: 1095-1099.
19. LEVY, F., J. ANTONOVICS, J. E. BOYNTON, AND N. W. GILLHAM. 1996. A population genetic analysis of chloroplast DNA in Phacelia. Heredity 76: 143-155.
20. MAGGS, C. A., AND M. H. HOMMERSAND. 1993. Seaweeds of the British Isles, vol. 1, Rhodophyta, Part 3A, Ceramiales. Natural History Museum/ HMSO, London, UK.
21. _, L. M. MCIVOR, C. M. EVANS, AND M. J. STANHOPE. 2000. The type species of Ceramium (Rhodophyta), Ceramium virgatum Roth: typification and phylogeny. Journal of Phycology 36(supplement): 45-46.
22. _, AND B. A. WARD. 1996. The genus Pikea (Dumontiaceae, Rhodophyta) in England and the North Pacific: comparative morphological, life history and molecular studies. Journal of Phycology 32: 176-193.
23. MILLIGAN, B. G. 1991. Chloroplast DNA diversity within and among populations of Trifolium pratense. Current Genetics 19: 411-416.
24. PAGE, R. D. M. 1996. An application to display phylogenetic trees on personal computers. Computer Applications in the Biosciences 12: 357-358.
25. PALACIOS, C., J. A. ROSSELO, AND F. GONZALEZ-CANDELAS. 2000. Study of the evolutionary relationships among Limonium species (Plumbaginaceae) using nuclear and cytoplasmic molecular markers. Molecular Phylogenetics and Evolution 14: 232-249.
26. PARSONS, T. H., C. A. MAGGS, AND S. E. DOUGLAS. 1990. Plastid DNA restriction analysis links the heteromorphic phases of an apomictic red algal life history. Journal of Phycology 26: 495-500.
27. RAGAN, M. A., AND R. R. GUTELL. 1995. Are red algae plants? Botanical Journal of the Linnean Society 118: 81-105.
28. RAYMOND, M., AND F. ROUSSET. 1995a. An exact test for population differentiation. Evolution 49: 1280-1283.
29. _, AND _. 1995b. Genepop (version 1.2): population genetics software for exact tests and ecumenicism. Journal of Heredity 86: 248-249.
30. RICE. E. L., AND C. J. BIRD. 1990. Relationships among geographically distant populations of Gracilaria verrucosa (Gracilariales, Rhodophyta) and related species. Phycologia 29: 501-510.
31. SCHAAL, B. A., D. A. HAYWORTH, K. M. OLSEN, J. T. RAUSCHER, AND W. A. SMITH. 1998. Phylogeographic studies in plants: problems and prospects. Molecular Ecology 7: 465-474.
32. SOLTIS, D. E., M. A. GITZENDANNER, D. D. STRENGE, AND P. S. SOLTIS. 1997. Chloroplast DNA intraspecific phylogeography of plants from the Pacific Northwest of North America. Intraspecific chloroplast DNA variation: systematic and phylogenetic implications. Plant Systematics and Evolution 206: 353-373.
33. _, P. S. SOLTIS, AND B. G. MILLIGAN. 1992. Intraspecific chloroplast DNA variation: systematic and phylogenetic implications. In P. S. Soltis, D. E. Soltis, and J. J. Doyle [eds.], Molecular systematics of plants. 117-150. Chapman and Hall, New York. New York, USA.
34. SWOFFORD, D. L. 1999. PAUP*: phylogenetic analysis using parsimony (* and other methods). Sinauer, Sunderland, Massachusetts, USA.
35. TABERLET, P., L. GIELLY, G. PAUTOU, AND J. BOUVET. 1991. Universal primers for amplification of three non-coding regions of chloroplast DNA. Plant Molecular Biology 17: 1105-1109.
36. TARAYRE, M., P. SAUMITOU-LAPRADE, J. CUGUEN, D. COUVET, AND J. D. THOMPSON. 1997. The spatial genetic structure of cytoplasmic (cpDNA) and nuclear (allozyme) markers within and among populations of the gynodioecious Thymus vulgaris (Baliatae) in southern France. American Journal of Botany 84: 1675-1684.
37. WARD, B. A. 2000. A morphological and molecular systematic study of Ceramium in the British Isles. Ph.D. dissertation. Queen's University. Belfast, UK.
38. WIENS, J. J. 1999. Polymorphism in systematics and comparative biology. Annual Review of Ecology and Systematics 30: 327-362.
39. ZUCCARELLO, G. C., J. BARTLETT, AND P. H. YEATES. 2000. Differentiation of Caloglossa leprieurii (Rhodophyta) populations in northern and eastern Australia using plastid haplotypes. European Journal of Phycology, in press.
40. _, J. A. WEST, M. KAMIYA, AND R. J. KING. 1999. A rapid method to score plastid haplotypes in the red seaweeds and its use in determining parental inheritance of plastids in the red alga Bostrychia (Ceramiales). Hydrobiologia 401: 207-214.
41. _, _, AND R. J. KING. 1999. Evolutionary divergence in the Botrychia moritziana/B. radicans complex (Rhodomelaceae, Rhodophyta): molecular and hybridization data. Phycologia 38: 234-244.