Divergence in the chloroplast genome and nuclear rDNA of the rare Western Australian plant Lambertia orbifolia Gardner (Proteaceae)

Molecular Ecology

Volumn 8, Issue 11, 1999, Pages 1789-1796

  Byrne, M ^a   Macdonald, B ^a   Coates, D ^a  

^a Bentley Delivery Centre   (Australia)

Author keywords

Conservation; CpDNA; Genetic diversity; Intraspecific phylogeography; Lambertia

Indexed keywords

AUSTRALIA; CHLOROPLAST DNA; GENE MUTATION; GENETIC DIVERSITY; GEOGRAPHIC DISTRIBUTION; HAPLOTYPE; PHYLOGENY; PLANT GENOME; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; RIBOSOMAL DNA;

LAMBERTIA ORBIFOLIA;

EID: 0033427217     PISSN: 09621083     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-294X.1999.00743.x     Document Type: Article

References (39)

1. Appels R, Honeycutt RL (1986) Evolution over a billion years. In: (ed. Dutta SK) DMA Systematics, Vol. 2, pp. 81-135. CRC Press, Boca Raton.
2. Banks JA, Birky CW Jr (1985) Chloroplast DNA diversity is low in a wild plant, Lupinus texensis. Proceedings of the National Academy of Sciences USA, 82, 6950-6954.
3. Birky CW (1988) Evolution and variation in plant chloroplast and mitochondrial genomes. In: (eds Gottlieb LD, Jain SK) Plant Evolutionary Biology, pp. 23-53. Chapman & Hall, New York.
4. Butcher PA, Byrne M, Moran GF (1995) Variation within and among the chloroplast genomes of Melaleuca alternifolia and M. linariifolia (Myrtaceae). Plant Systematics and Evolution, 194, 69-81.
5. Byrne M, Macdonald B (2000) Phylogeography and conservation of three oil mallee taxa in the oleosa group of eucalypts. Australian Journal of Botany, in press.
6. Byrne M, Moran GF (1994) Population divergence in the chloroplast genome of Eucalyptus nitens. Heredity, 73, 18-28.
7. Byrne M, Moran GF, Tibbits W (1993) Restriction map and maternal inheritance of chloroplast DNA in Eucalyptus nitens. Journal of Heredity, 84, 218-220.
8. Byrne M, Waycott M, Hobbs AA, James SH (1997) Variation in the ribosomal DNA within and between populations of Isotoma petraea and Macrozamia riedlei. Heredity, 79, 578-583.
9. Coates D, Hamley V (1999) Genetic divergence and the mating system in endangered and geographically restricted Lambertia orbifolia (Proteaceae). Heredity, 83, in press.
10. Doebley J, Renfroe W, Blanton A (1987) Restriction site variation in the Zea chloroplast genome. Genetics, 117, 139-147.
11. Dover G, Brown S, Coen E, Dallas J, Stachan T, Trick M (1982) The dynamics of genome evolution and species differentiation. In: (eds Dover GA, Flavell RB) Genome Evolution, pp. 342-372. Academic Press, New York.
12. Felsenstein J (1993) PHYLIP (Phylogeny Inference Package), Version 3.5c. Department of Genetics, The University of Washington, Seattle.
13. Gepts P, Clegg MT (1989) Genetic diversity in pearl millet (Pennisetum glaucum (L.) R.Br.) at the DNA sequence level: consequences for genetic conservation. Journal of Heredity, 80, 203-208.
14. Gerlach WL, Bedbrook JR (1979) Cloning and characterization of ribosomal RNA genes from wheat and barley. Nucleic Acids Research, 7, 1869-1885.
15. Hopper SD (1979) Biogeographical aspects of speciation in the southwest Australian flora. Annual Review of Ecology and Systematic, 19, 399-422.
16. Hopper SD, Harvey MS, Chappill JA, Main AR, Main BY (1996) The Western Australian biota as Gondwanan heritage - a review. In: (eds Hopper SD, Chappill JA, Harvey MS, George AS) Gondwanan Heritage. Past, Present and Future of the Western Australian Biota, pp. 1-46. Surrey Beatty & Sons, Chipping Norton.
17. Kim KJ, Jansen RK, Turner BL (1992) Evolutionary implications of intraspecific chloroplast DNA variation in dwarf dandelions (Krigia; Asteraceae). American Journal of Botany, 79, 708-715.
18. Lavin M, Matthews S, Hughes C (1991) Chloroplast DNA variation in Gliricidia sepium (Leguminosae): intraspecific phytogeny and tokogeny. American Journal of Botany, 78, 1576-1585.
19. Lynch M, Crease TJ (1990) The analysis of population survey data on DNA sequence variation. Molecular Biology and Evolution, 7, 377-394.
20. Moritz CC (1994) Defining 'evolutionarily significant units' for conservation. Trends in Ecology and Evolution, 3, 401-411.
21. Nei M (1977) F-statistics and analysis of gene diversity in subdivided populations. Annals of Human Genetics, 41, 225-233.
22. Nei M (1978) Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics, 89, 583-590.
23. Obbens F, Coates D (1997) Conservation biology and management of endangered Lambertia species. Report to Environment Australia. Department of Conservation and Land Management, Perth.
24. Palmer JD (1987) Chloroplast DNA evolution and biosystematic uses of chloroplast DNA variation. American Naturalist, 130, S6-S29.
25. Palmer JD, Jorgensen RA, Thompson WF (1985) Chloroplast DNA variation and evolution in Pisum: patterns of change and phylogenetic analysis. Genetics, 109, 195-213.
26. Rieseberg LH, Soltis DE, Palmer JD (1988) A molecular reexamination of introgression between Helianthus annuus and H. bolanderi (Compositae). Evolution, 42, 227-238.
27. Rieseberg LH, Wendel JF (1993) Introgression and its consequences in plants. In: (ed. Harrison RG) Hybrid Zones and the Evolutionary Process, pp. 70-109. Oxford University Press, New York.
28. Schaal BA, Hayworth DA, Olsen KM, Rauscher JT, Smith WA (1998) Phylogeographic studies in plants: problems and prospects. Molecular Ecology, 7, 465-474.
29. Schaal BA, Leverich WJ, Rogstad SH (1991) A comparison of methods for assessing genetic variation in plant conservation biology. In: (eds Falk DA, Holsinger KE) Genetics and Conservation of Rare Plants, pp. 123-134. Oxford University Press, New York.
30. Sewell MM, Parks CR, Chase MW (1996) Intraspecific chloroplast DNA variation and biogeography of North American Liriodendron L. (Magnoloaceae). Evolution, 50, 1147-1154.
31. Shinozaki K, Ohme M, Tanaka M et al. (1986) The complete nucleotide sequence of the tobacco chloroplast genome: its gene organization and expression. European Molecular Biology Organisation Journal, 5, 2043-2049.
32. Soltis DE, Gitzendanner MA, Strenge DD, Soltis PE (1997) Chloroplast DNA intraspecific phylogeography of plants from the Pacific Northwest of North America. Plant Systematics and Evolution, 206, 353-373.
33. Soltis DE, Mayer MS, Soltis PE, Edgerton M (1991) Chloroplast DNA variation in Tellima grandiflora (Saxifragaceae). American Journal of Botany, 78, 1379-1390.
34. Soltis DE, Soltis PS, Ranker TA, Ness BD (1989) Chloroplast DNA variation in a wild plant, Tolmiea menziesii. Genetics, 121, 819-826.
35. Suguira M, Shinozaki K, Zaita N, Kusuda M, Kumano M (1986) Clone bank of the tobacco (Nicotiana tabacmn) chloroplast genome as a set of overlapping restriction endonuclease fragments: mapping of eleven ribosomal protein genes. Plant Science, 44, 211-216.
36. Swofford DL, Selander RB (1981) BIOSYS-1. A computer program for the analysis of allelic variation in genetics. Department of Genetics and Development, University of Illinois at Urbana, Champaign.
37. Sytsma KJ, Gottlieb LD (1986) Chloroplast DNA evolution and phylogenetic relationships in Clarkia sect. Peripetasma (Onagraceae). Evolution, 40, 1248-1261.
38. Waters ER, Schaal BA (1991) No variation is detected in the chloroplast genome of Pinus torreyanna. Canadian Journal of Forest Research, 21, 1832-1835.
39. Wolfe KH, Li WH, Sharp PM (1987) Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast and nuclear DNAs. Proceedings of the National Academy of Sciences of the USA, 84, 9054-9058.