Chloroplast DNA restriction site variation and phylogeny of the Berberidaceae

American Journal of Botany

Volumn 85, Issue 12, 1998, Pages 1766-1778

  Kim, Young Dong ^a,b   Jansen, Robert K ^a  

^a UNIVERSITY OF TEXAS AT AUSTIN   (United States)

^b Hallym University   (South Korea)

Author keywords

Berberidaceae; Chloroplast DNA phylogeny; Parsimony; Restriction sites

Indexed keywords

CHLOROPLAST DNA; CONSENSUS SEQUENCE; GENE REARRANGEMENT; GENETIC LINE; INVERTED REPEAT; MONOPHYLY; PARSIMONY ANALYSIS; PHYLOGENY; RESTRICTION ENZYME ANALYSIS;

GENETIC VARIATION; PHYLOGENY;

BERBERIDACEAE; BERBERIS; DIPHYLLEIA; MAHONIA;

EID: 0032229590     PISSN: 00029122     EISSN: None     Source Type: Journal    
DOI: 10.2307/2446511     Document Type: Article

References (68)

1. Phylogenetic relationships of the Berberidaceae based on partial sequences of the gapA gene
2. Berberis and Mahonia: A taxonomic revision
3. Character-state weighting for restriction site data in phylogenetic reconstruction, with an example from chloroplast DNA
4. Comparative restriction site mapping of chloroplast DNA implies new phylogenetic relationships within Rubiaceae
5. The limits of amino acid sequence data in angiosperm phylogenetic reconstruction
6. Carpel morphology of the Berberidaceae
7. A revised system of classification of the angiosperms
8. Cladistic analysis of restriction endonuclease cleavage maps within a maximum-likelihood framework
9. A study of chromosome number in two genera of Berberidaceae: Mahonia and Berberis
10. Phylogenetic relationships of Dipsacales based on rbcL sequences
11. Restriction site mapping of the chloroplast DNA inverted repeat: A molecular phylogeny of the Asteridae
12. A chloroplast DNA phylogeny of the Caryophyllales based on structural and inverted repeat restriction site variation
13. A rapid DNA isolation procedure for small quantities of fresh leaf tissue
14. Methods for computing Wagner trees
15. Confidence limits on phylogenies: An approach using the bootstrap
16. Phylogenetic analysis of restriction site data
17. Phylogeny of the Ranunculaceae based on preliminary atpB, rbcL and 18S nuclear ribosomal DNA sequence data
18. Inter-familial relationships in the Ranunculidae based on molecular systematics
19. Phylogenetic analysis of chloroplast DNA restriction data at higher taxonomic levels: An example from the Asteraceae
20. Chloroplast DNA from lettuce and Barnadesia (Asteraceae): Structure, gene localization, and characterization of a large inversion
21. Phylogenetic implications of chloroplast DNA restriction site variation in the Mutisieae (Asteraceae)
22. The interpretation of comparative serological results
23. Chloroplast DNA variation and phylogeny of the Ranunculaceae
24. Chromosome morphology of Caulophyllum robustum (Podophyllaceae) and its systematic implications
25. Phylogenetic and evolutionary implications of interspecific chloroplast DNA variation in Krigia (Asteraceae-Lactuceae)
26. Characterization and phylogenetic distribution of a structural change in chloroplast DNAs of Berberidaceae
27. Phylogenetic implications of the chloroplast DNA variation from the Berberidaceae
28. Phylogenetic implications of rbcL and ITS sequence variation in the Berberidaceae
29. Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea
30. Comparative palynomorphological study of the family Berberidaceae. 2. Morphology of the pollen grains of the genera Gymnospermium, Leontice, Caulophyllum, Bongardia, Epimedium, Vancouveria, Achlys, and Jeffersonia
31. Morphology and biology of Glaucidium palmature Sib. et Zucc. with notes of affinities to the allied genera Hydrastis, Podophyllum, and Diphylleia
32. Ranzania japonica, its morphology, biology and systematic affinities
33. Chromosome study in three species of Berberidaceae
34. Chromosome study in seven species of Berberidaceae
35. Chromosome study in five species of Berberidaceae
36. Chromosome study in four species of Berberidaceae
37. Phylogenetic systematics of Berberidaceae and Ranunculales (Magnoliidae)
38. The discovery and importance of multiple islands of most parsimonious trees
39. Cladistic analysis of restriction site variation within the chloroplast DNA inverted repeat region of selected Hamamelididae
40. Phylogeny of the Berberidaceae with an evaluation of classifications
41. Beitrage zur chromosomenphylogenie der Berberidaceen
42. Karyotype evolution in Caulophyllum
43. Phylogeny and inflorescence of Berberidaceae - A morphological survey
44. Pollen morphology and phylogenetic relationships of the Berberidaceae
45. Monophyly of the Asteridae and identification of their major lineages inferred from DNA sequences of rbcL
46. A chloroplast DNA phylogeny of the Solanaceae: Subfamilial relationships and character evolution
47. Chloroplast DNA systematics: A review of methods and data analysis
48. Isolation and structural analysis of chloroplast DNA
49. Subfamilial phylogenetic relationships of the Bromeliaceae: Evidence from chloroplast DNA restriction site variation
50. Phylogeny and wood anatomy of Nandina
51. Chloroplast DNA variation within and among genera of the Heuchera group (Saxifragaceae): Evidence for chloroplast transfer and paraphyly
52. Intraspecific chloroplast DNA variation: Systematic and phylogenetic implications
53. Molecular systematics of Saxifragaceae sensu stricto
54. A phylogenetic analysis of chloroplast DNA restriction site variation in Poaceae subfam. Pooideae
55. Berberidaceae
56. Clone bank of the tobacco (Nicotiana tabacum) chloroplast genome as a set of overlapping restriction endonuclease fragments: Mapping of eleven ribosomal protein genes
57. Molecular systematics of Onagraceae: Examples from Clarkia and Fuchsia
58. Studies in morphology and systematics of Berberidaceae. II. Floral anatomy of Mahonia japonica (Thunb.) DC. and Berberis thunbergii DC
59. The comparative floral anatomy and systematics of the Berberidaceae. I. Morphology
60. The comparative floral anatomy and systematics of the Berberidaceae. II. Systematic considerations
61. The morphology and anatomy of Hydrastis (Ranunculaceae): Systematic reevaluation of the genus
62. Phylogenetic relationships and patterns of character change in the tribe Lactuceae (Asteraceae) based on chloroplast DNA restriction site variation
63. Rates of nucleotide substitution vary greatly among mitochondrial, chloroplast, and nuclear DNAs