메뉴 건너뛰기




Volumn 5, Issue , 2004, Pages

Multi-species sequence comparison reveals dynamic evolution of the elastin gene that has involved purifying selection and lineage-specific insertions/deletions

Author keywords

[No Author keywords available]

Indexed keywords

ELASTIN; RNA; DNA;

EID: 9444228176     PISSN: 14712164     EISSN: None     Source Type: Journal    
DOI: 10.1186/1471-2164-5-31     Document Type: Article
Times cited : (30)

References (42)
  • 1
    • 0025424630 scopus 로고
    • Tropoelastin heterogeneity: Implications for protein function and disease
    • Parks WC, Deak SB: Tropoelastin heterogeneity: implications for protein function and disease. Am J Respir Cell Mol Biol 1990, 2:399-406.
    • (1990) Am. J. Respir. Cell Mol. Biol. , vol.2 , pp. 399-406
    • Parks, W.C.1    Deak, S.B.2
  • 2
    • 0010485596 scopus 로고    scopus 로고
    • Elastin
    • Second Edition Edited by: Edited by Thomas Kreis late Professor Département de Biologie Cellulaire Université de r s11'eve and Ronald Vale Professor Department of Pharmacology University of California San Francisco. OUP/Sambrook and Tooze Publications (588 pages)
    • Mecham RP: Elastin. Guidebook to the Extracellular Matrix, Anchor and Adhesion Proteins Second Edition Edited by: Edited by Thomas Kreis late Professor Département de Biologie Cellulaire Université de r s11'eve and Ronald Vale Professor Department of Pharmacology University of California San Francisco. OUP/Sambrook and Tooze Publications (588 pages); 1999:414-417.
    • (1999) Guidebook to the Extracellular Matrix, Anchor and Adhesion Proteins , pp. 414-417
    • Mecham, R.P.1
  • 6
    • 0025880719 scopus 로고
    • Mammalian tropoelastin: Multiple domains of the protein define an evolutionarily divergent amino acid sequence
    • Boyd CD, Christiano AM, Pierce RA, Stolle CA, Deak SB: Mammalian tropoelastin: multiple domains of the protein define an evolutionarily divergent amino acid sequence. Matrix 1991, 11:235-241.
    • (1991) Matrix , vol.11 , pp. 235-241
    • Boyd, C.D.1    Christiano, A.M.2    Pierce, R.A.3    Stolle, C.A.4    Deak, S.B.5
  • 10
    • 0034528516 scopus 로고    scopus 로고
    • Divergent human and mouse orthologs of a novel gene (WBSCR15/Wbscr15) reside within the genomic interval commonly deleted in Williams syndrome
    • Doyle JL, DeSilva U, Miller W, Green ED: Divergent human and mouse orthologs of a novel gene (WBSCR15/Wbscr15) reside within the genomic interval commonly deleted in Williams syndrome. Cytogenet Cell Genet 2000, 90:285-290.
    • (2000) Cytogenet. Cell Genet. , vol.90 , pp. 285-290
    • Doyle, J.L.1    DeSilva, U.2    Miller, W.3    Green, E.D.4
  • 13
    • 0028985994 scopus 로고
    • Transforming growth factor-beta reverses a posttranscriptional defect in elastin synthesis in a cutis laxa skin fibroblast strain
    • Zhang MC, Giro M, Quaglino D., Jr., Davidson JM: Transforming growth factor-beta reverses a posttranscriptional defect in elastin synthesis in a cutis laxa skin fibroblast strain. J Clin Invest 1995, 95:986-994.
    • (1995) J. Clin. Invest. , vol.95 , pp. 986-994
    • Zhang, M.C.1    Giro, M.2    Quaglino Jr., D.3    Davidson, J.M.4
  • 14
    • 0033534618 scopus 로고    scopus 로고
    • Cutis laxa arising from frameshift mutations in exon 30 of the elastin gene (ELN)
    • Zhang MC, He L, Giro M, Yong SL, Tiller GE, Davidson JM: Cutis laxa arising from frameshift mutations in exon 30 of the elastin gene (ELN). J Biol Chem 1999, 274:981-986.
    • (1999) J. Biol. Chem. , vol.274 , pp. 981-986
    • Zhang, M.C.1    He, L.2    Giro, M.3    Yong, S.L.4    Tiller, G.E.5    Davidson, J.M.6
  • 17
    • 0032973922 scopus 로고    scopus 로고
    • Supravalvular aortic stenosis: A splice site mutation within the elastin gene results in reduced expression of two aberrantly spliced transcripts
    • Urban Z, Michels VV, Thibodeau SN, Donis-Keller H, Csiszar K, Boyd CD: Supravalvular aortic stenosis: a splice site mutation within the elastin gene results in reduced expression of two aberrantly spliced transcripts. Hum Genet 1999, 104:135-142.
    • (1999) Hum. Genet. , vol.104 , pp. 135-142
    • Urban, Z.1    Michels, V.V.2    Thibodeau, S.N.3    Donis-Keller, H.4    Csiszar, K.5    Boyd, C.D.6
  • 23
    • 0032753460 scopus 로고    scopus 로고
    • Association of intron phases with conservation at splice site sequences and evolution of spliceosomal introns
    • Long M, Deutsch M: Association of intron phases with conservation at splice site sequences and evolution of spliceosomal introns. Mol Biol Evol 1999, 16:1528-1534.
    • (1999) Mol. Biol. Evol. , vol.16 , pp. 1528-1534
    • Long, M.1    Deutsch, M.2
  • 24
    • 0029586334 scopus 로고
    • Intron phase correlations and the evolution of the intron/exon structure of genes
    • Long M, Rosenberg C, Gilbert W: Intron phase correlations and the evolution of the intron/exon structure of genes. Proc Natl Acad Sci U S A 1995, 92:12495-12499.
    • (1995) Proc. Natl. Acad. Sci. U S A , vol.92 , pp. 12495-12499
    • Long, M.1    Rosenberg, C.2    Gilbert, W.3
  • 25
    • 0022005270 scopus 로고
    • A new method for estimating synonymous and nonsynonymous rates of nucleotide substitution considering the relative likelihood of nucleotide and codon changes
    • Li WH, Wu CI, Luo CC: A new method for estimating synonymous and nonsynonymous rates of nucleotide substitution considering the relative likelihood of nucleotide and codon changes. Mol Biol Evol 1985, 2:150-174.
    • (1985) Mol. Biol. Evol. , vol.2 , pp. 150-174
    • Li, W.H.1    Wu, C.I.2    Luo, C.C.3
  • 26
    • 0036853613 scopus 로고    scopus 로고
    • Sequence gaps join mice and men: Phylogenetic evidence from deletions in two proteins
    • Poux C, Van Rheede T, Madsen O, De Jong WW: Sequence gaps join mice and men: phylogenetic evidence from deletions in two proteins Mol Biol Evol 2002, 19:2035-2037.
    • (2002) Mol. Biol. Evol. , vol.19 , pp. 2035-2037
    • Poux, C.1    Van Rheede, T.2    Madsen, O.3    De Jong, W.W.4
  • 27
    • 9444241334 scopus 로고    scopus 로고
    • Patterns of insertions and their covariation with substitutions in the rat, mouse and human genomes
    • (in press Genome Res)
    • Yang S, Smit A, Schwartz S, Chiaromonte F, Roskin KM, Haussler D, Miller W, Hardison RC: Patterns of insertions and their covariation with substitutions in the rat, mouse and human genomes. (in press Genome Res). 2004.
    • (2004)
    • Yang, S.1    Smit, A.2    Schwartz, S.3    Chiaromonte, F.4    Roskin, K.M.5    Haussler, D.6    Miller, W.7    Hardison, R.C.8
  • 29
    • 0036156599 scopus 로고    scopus 로고
    • Chromosome-wide assessment of replication timing for human chromosomes 11q and 21q: Disease-related genes in timing-switch regions
    • Watanabe Y, Fujiyama A, Ichiba Y, Hattori M, Yada T, Sakaki Y, Ikemura T: Chromosome-wide assessment of replication timing for human chromosomes 11q and 21q: disease-related genes in timing-switch regions. Hum Mol Genet 2002, 11:13-21.
    • (2002) Hum. Mol. Genet. , vol.11 , pp. 13-21
    • Watanabe, Y.1    Fujiyama, A.2    Ichiba, Y.3    Hattori, M.4    Yada, T.5    Sakaki, Y.6    Ikemura, T.7
  • 30
    • 2642689662 scopus 로고    scopus 로고
    • Structural analysis of slipped-strand DNA (S-DNA) formed in (CTG)n. (CAG)n repeats from the myotonic dystrophy locus
    • Pearson CE, Wang YH, Griffith JD, Sinden RR: Structural analysis of slipped-strand DNA (S-DNA) formed in (CTG)n. (CAG)n repeats from the myotonic dystrophy locus. Nucleic Acids Res 1998, 26:816-823.
    • (1998) Nucleic Acids Res. , vol.26 , pp. 816-823
    • Pearson, C.E.1    Wang, Y.H.2    Griffith, J.D.3    Sinden, R.R.4
  • 32
    • 0027717916 scopus 로고
    • Peptide sequences selected by BA4, a tropoelastin- specific monoclonal antibody, are ligands for the 67-kilodalton bovine elastin receptor
    • Grosso LE, Scott M: Peptide sequences selected by BA4, a tropoelastin- specific monoclonal antibody, are ligands for the 67-kilodalton bovine elastin receptor. Biochemistry 1993, 32: 3369-13374.
    • (1993) Biochemistry , vol.32 , pp. 13369-13374
    • Grosso, L.E.1    Scott, M.2
  • 33
    • 0027283014 scopus 로고
    • PGAIPG, a repeated hexapeptide of bovine and human tropoelastin, is chemotactic for neutrophils and Lewis lung carcinoma cells
    • Grosso LE, Scott M: PGAIPG, a repeated hexapeptide of bovine and human tropoelastin, is chemotactic for neutrophils and Lewis lung carcinoma cells. Arch Biochem Biophys 1993, 305: 01-404.
    • (1993) Arch. Biochem. Biophys. , vol.305 , pp. 401-404
    • Grosso, L.E.1    Scott, M.2
  • 34
    • 0027536583 scopus 로고
    • PGAIPG, a repeated hexapeptide of bovine tropoelastin, is a ligand for the 67-kDa bovine elastin receptor
    • Grosso LE, Scott M: PGAIPG, a repeated hexapeptide of bovine tropoelastin, is a ligand for the 67-kDa bovine elastin receptor Matrix 1993, 13:157-164.
    • (1993) Matrix , vol.13 , pp. 157-164
    • Grosso, L.E.1    Scott, M.2
  • 35
    • 0022910912 scopus 로고
    • Characterization of biologically active domains on elastin: Identification of a monoclonal antibody to a cell recognition site
    • Wrenn DS, Griffin GL, Senior RM, Mecham RP: Characterization of biologically active domains on elastin: identification of a monoclonal antibody to a cell recognition site. Biochemistry 1986, 25:5172-5176.
    • (1986) Biochemistry , vol.25 , pp. 5172-5176
    • Wrenn, D.S.1    Griffin, G.L.2    Senior, R.M.3    Mecham, R.P.4
  • 37
    • 0028169396 scopus 로고
    • Use of an intron polymorphism to localize the tropoelastin gene to mouse chromosome 5 in a region of linkage conservation with human chromosome 7
    • Wydner KS, Sechler JL, Boyd CD, Passmore HC: Use of an intron polymorphism to localize the tropoelastin gene to mouse chromosome 5 in a region of linkage conservation with human chromosome 7. Genomics 1994, 23:125-131.
    • (1994) Genomics , vol.23 , pp. 125-131
    • Wydner, K.S.1    Sechler, J.L.2    Boyd, C.D.3    Passmore, H.C.4
  • 38
    • 0025130777 scopus 로고
    • Heterogeneity of rat tropoelastin mRNA revealed by cDNA cloning
    • Pierce RA, Deak SB, Stolle CA, Boyd CD: Heterogeneity of rat tropoelastin mRNA revealed by cDNA cloning. Biochemistry 1990, 29:9677-9683.
    • (1990) Biochemistry , vol.29 , pp. 9677-9683
    • Pierce, R.A.1    Deak, S.B.2    Stolle, C.A.3    Boyd, C.D.4
  • 39
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG: The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 1997, 25:4876-4882.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 40
    • 0036139211 scopus 로고    scopus 로고
    • MEGA2: Molecular evolutionary genetics analysis software
    • Kumar S, Tamura K, Jakobsen IB, Nei M: MEGA2: molecular evolutionary genetics analysis software. Bioinformatics 2001, 17:1244-1245.
    • (2001) Bioinformatics , vol.17 , pp. 1244-1245
    • Kumar, S.1    Tamura, K.2    Jakobsen, I.B.3    Nei, M.4
  • 41
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou N, Nei M: The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution 1987, 4:406-425.
    • (1987) Molecular Biology and Evolution , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 42
    • 0000732090 scopus 로고
    • Evolution of protein molecules
    • Edited by: H N Munro. New York, Academic Press
    • Jukes TH, Cantor CR: Evolution of protein molecules. Mammalian Protein Metabolism Edited by: H N Munro. New York, Academic Press; 1969:21-132.
    • (1969) Mammalian Protein Metabolism , pp. 21-132
    • Jukes, T.H.1    Cantor, C.R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.