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Volumn 47, Issue 5-6, 2003, Pages 440-446

Use of earthworm casts to validate FT-IR spectroscopy as a 'sentinel' technology for high-throughput monitoring of global changes in microbial ecology

Author keywords

Earthworms; FT IR; Metabolic fingerprinting; Micro organisms

Indexed keywords

FOURIER TRANSFORM; GENETIC ANALYSIS; INFRARED SPECTROSCOPY; METABOLISM; MICROBIAL ECOLOGY; SOIL MICROORGANISM; WORM CAST;

EID: 9144240427     PISSN: 00314056     EISSN: None     Source Type: Journal    
DOI: 10.1078/0031-4056-00210     Document Type: Conference Paper
Times cited : (16)

References (17)
  • 1
    • 0028980725 scopus 로고
    • Interaction of a genetically-modified pseudomonas-fluorescens with the soil-feeding earthworm Octolasion cyaneum (Lumbricidae)
    • Clegg, C. D., Anderson, J. M., Lappinscott, H. M., Vanelsas, J. D., Jolly, J. M. (1995) Interaction of a genetically-modified pseudomonas- fluorescens with the soil-feeding earthworm Octolasion cyaneum (Lumbricidae). Soil Biology and Biochemistry 27, 1423-1429.
    • (1995) Soil Biology and Biochemistry , vol.27 , pp. 1423-1429
    • Clegg, C.D.1    Anderson, J.M.2    Lappinscott, H.M.3    Vanelsas, J.D.4    Jolly, J.M.5
  • 2
    • 0030027502 scopus 로고    scopus 로고
    • Influence of earthworm activity on gene transfer from Pseudomonas fluorescens to indigenous soil bacteria
    • Daane, L. L., Molina, J. A. E., Berry, E. C., Sadowsky, M. J. (1996) Influence of earthworm activity on gene transfer from Pseudomonas fluorescens to indigenous soil bacteria. Applied and Environmental Microbiology 62, 515-521
    • (1996) Applied and Environmental Microbiology , vol.62 , pp. 515-521
    • Daane, L.L.1    Molina, J.A.E.2    Berry, E.C.3    Sadowsky, M.J.4
  • 3
    • 0028037731 scopus 로고
    • Evolution of heavy-metal resistant transconjugants in a soil environment with a concomitant selective pressure
    • Derore, H., Top, E., Houwen, F., Mergeay, M., Verstraete, W. (1994) Evolution of heavy-metal resistant transconjugants in a soil environment with a concomitant selective pressure. FEMS Microbiology Ecology 14, 263-273.
    • (1994) FEMS Microbiology Ecology , vol.14 , pp. 263-273
    • Derore, H.1    Top, E.2    Houwen, F.3    Mergeay, M.4    Verstraete, W.5
  • 4
    • 0031781727 scopus 로고    scopus 로고
    • Rapid identification of urinary tract infection bacteria using hyperspectral, whole-organism fingerprinting and artificial neural networks
    • Goodacre, R., Timmins, E. M., Burton, R., Kaderbhai, N., Woodward, A. M., Kell, D. B., Rooney, P. J. (1998) Rapid identification of urinary tract infection bacteria using hyperspectral, whole-organism fingerprinting and artificial neural networks. Microbiology 144, 1157-1170.
    • (1998) Microbiology , vol.144 , pp. 1157-1170
    • Goodacre, R.1    Timmins, E.M.2    Burton, R.3    Kaderbhai, N.4    Woodward, A.M.5    Kell, D.B.6    Rooney, P.J.7
  • 5
    • 0033970940 scopus 로고    scopus 로고
    • The detection of the dipicolinic acid biomarker in Bacillus spores using Curie-point pyrolysis mass spectrometry and Fourier-transform infrared spectroscopy
    • Goodacre, R., Shann, B., Gilbert, R. J., Timmins, E. M., McGovern, A. C., Alsberg, B. K., Kell, D.B., Logan, N. A. (2000) The detection of the dipicolinic acid biomarker in Bacillus spores using Curie-point pyrolysis mass spectrometry and Fourier-transform infrared spectroscopy. Analytical Chemistry 72, 119-127.
    • (2000) Analytical Chemistry , vol.72 , pp. 119-127
    • Goodacre, R.1    Shann, B.2    Gilbert, R.J.3    Timmins, E.M.4    McGovern, A.C.5    Alsberg, B.K.6    Kell, D.B.7    Logan, N.A.8
  • 6
    • 0034468557 scopus 로고    scopus 로고
    • Rapid method for coextraction of DNA and RNA from natural environments for analysis of ribosomal DNA- and rRNA-based microbial community composition
    • Griffiths, R.I., Whiteley, A. S., O'Donnell, A. G., Bailey, M. J. (2000) Rapid method for coextraction of DNA and RNA from natural environments for analysis of ribosomal DNA-and rRNA-based microbial community composition. Applied and Environmental Microbiology 66, 5488-5491.
    • (2000) Applied and Environmental Microbiology , vol.66 , pp. 5488-5491
    • Griffiths, R.I.1    Whiteley, A.S.2    O'Donnell, A.G.3    Bailey, M.J.4
  • 9
    • 0027460328 scopus 로고
    • Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA
    • Muyzer, G., Dewaal, E. C., Uitterlinden, A. G. (1993) Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Applied and Environmental Microbiology 59, 695-700.
    • (1993) Applied and Environmental Microbiology , vol.59 , pp. 695-700
    • Muyzer, G.1    Dewaal, E.C.2    Uitterlinden, A.G.3
  • 10
    • 0003087415 scopus 로고    scopus 로고
    • What can infrared spectroscopy tell us about the structure and composition of intact bacterial cells?
    • Mantsch, H. H., Chapman, D. (eds) Wiley-Liss Inc.
    • Naumann, D., Schultz, C. P., Helm, D. (1996) What can infrared spectroscopy tell us about the structure and composition of intact bacterial cells? In: Mantsch, H. H., Chapman, D. (eds) Infrared spectroscopy of biomolecules. Wiley-Liss Inc. pp. 279-310.
    • (1996) Infrared Spectroscopy of Biomolecules , pp. 279-310
    • Naumann, D.1    Schultz, C.P.2    Helm, D.3
  • 11
    • 0026413442 scopus 로고
    • Microbial characterisations by FT-IR spectroscopy
    • Naumann, D., Helm, D., Labischinski, H. (1991) Microbial characterisations by FT-IR spectroscopy. Nature 351, 81-82.
    • (1991) Nature , vol.351 , pp. 81-82
    • Naumann, D.1    Helm, D.2    Labischinski, H.3
  • 12
    • 0031687533 scopus 로고    scopus 로고
    • Horizontal gene transfer from transgenic plants to terrestrial bacteria - A rare event?
    • Nielsen, K. M., Bones, A. M., Smalla, K., van Elsas, J. D. (1998) Horizontal gene transfer from transgenic plants to terrestrial bacteria - a rare event? FEMS Microbiology Review 22, 79-103.
    • (1998) FEMS Microbiology Review , vol.22 , pp. 79-103
    • Nielsen, K.M.1    Bones, A.M.2    Smalla, K.3    Van Elsas, J.D.4
  • 13
    • 0036263746 scopus 로고    scopus 로고
    • Intraspecific diversity of Brevibacterium linens, Corynebacterium glutamicum and Rhodococcus erythropolis based on partial 16S rDNA sequence analysis and Fourier-transform infrared (FT-IR) spectroscopy
    • Oberreuter, H., Charzinski, J., Scherer, S. (2002) Intraspecific diversity of Brevibacterium linens, Corynebacterium glutamicum and Rhodococcus erythropolis based on partial 16S rDNA sequence analysis and Fourier-transform infrared (FT-IR) spectroscopy. Microbiology 148, 1523-1532.
    • (2002) Microbiology , vol.148 , pp. 1523-1532
    • Oberreuter, H.1    Charzinski, J.2    Scherer, S.3
  • 14
    • 0031964328 scopus 로고    scopus 로고
    • Rapid differentiation of closely related Candida species and strains by pyrolysis mass spectrometry and Fourier transform infrared spectroscopy
    • Timmins, E. M., Howell, S. A., Alsberg, B. K., Noble, W. C., Goodacre, R. (1998) Rapid differentiation of closely related Candida species and strains by pyrolysis mass spectrometry and Fourier transform infrared spectroscopy. Journal of Clinical Microbiology 36, 367-374.
    • (1998) Journal of Clinical Microbiology , vol.36 , pp. 367-374
    • Timmins, E.M.1    Howell, S.A.2    Alsberg, B.K.3    Noble, W.C.4    Goodacre, R.5
  • 15
    • 0000008516 scopus 로고
    • Biochemical analysis of biomass, commumity structure, nutritional status and metabolic activity of microbial communities in soil
    • Stotzky, G., Bollag, J. M. (eds) Marcel Dekker, New York
    • Tunlid, A., White, D. C. (1992) Biochemical analysis of biomass, commumity structure, nutritional status and metabolic activity of microbial communities in soil. In Stotzky, G., Bollag, J. M. (eds) Soil Biochemistry vol 7. Marcel Dekker, New York, pp. 229-262.
    • (1992) Soil Biochemistry , vol.7 , pp. 229-262
    • Tunlid, A.1    White, D.C.2
  • 16
    • 0034084123 scopus 로고    scopus 로고
    • Bacterial community structure and physiological state within an industrial phenol bioremediation system
    • Whiteley, A. S., Bailey, M. J. (2000) Bacterial community structure and physiological state within an industrial phenol bioremediation system. Applied and Environmental Microbiology 66, 2400-2407.
    • (2000) Applied and Environmental Microbiology , vol.66 , pp. 2400-2407
    • Whiteley, A.S.1    Bailey, M.J.2
  • 17
    • 0030952543 scopus 로고    scopus 로고
    • Diffuse reflectance absorbance spectroscopy taking in chemometrics (DRASTIC). A hyperspectral FT-IR-based approach to rapid screening for metabolite overproduction
    • Winson, M. K., Goodacre, R., Woodward, A. M., Timmins, E. M., Jones, A., Alsberg, B. K., Rowland, J. J., Kell, D. B. (1997) Diffuse reflectance absorbance spectroscopy taking in chemometrics (DRASTIC). A hyperspectral FT-IR-based approach to rapid screening for metabolite overproduction. Analytica Chimica Acta 348, 273-282.
    • (1997) Analytica Chimica Acta , vol.348 , pp. 273-282
    • Winson, M.K.1    Goodacre, R.2    Woodward, A.M.3    Timmins, E.M.4    Jones, A.5    Alsberg, B.K.6    Rowland, J.J.7    Kell, D.B.8


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.