H2A.Z alters the nucleosome surface to promote HP1α-mediated chromatin fiber folding

Molecular Cell

Volumn 16, Issue 4, 2004, Pages 655-661

  Fan, Jun Y ^a   Rangasamy, Danny ^a   Luger, Karolin ^b   Tremethick, David J ^a  

^a AUSTRALIAN NATIONAL UNIVERSITY   (Australia)

^b Immunology and Pathology   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BINDING PROTEIN; HISTONE; PROTEIN HP1ALPHA; UNCLASSIFIED DRUG;

AMINO TERMINAL SEQUENCE; ARTICLE; CELL SURFACE; CHROMATIN; CHROMATIN STRUCTURE; CROSS LINKING; DISSOCIATION CONSTANT; IMMUNOPRECIPITATION; NUCLEOSOME; PROTEIN BINDING; PROTEIN PROTEIN INTERACTION; PROTEIN PURIFICATION;

AMINO ACID SEQUENCE; ANIMALS; BLOTTING, WESTERN; CHROMATIN; CHROMATIN IMMUNOPRECIPITATION; DNA-BINDING PROTEINS; GENE EXPRESSION REGULATION; HETEROCHROMATIN; HISTONES; MODELS, BIOLOGICAL; MOLECULAR SEQUENCE DATA; NUCLEOSOMES; PROTEIN CONFORMATION; PROTEIN FOLDING; PROTEIN STRUCTURE, SECONDARY; PROTEIN STRUCTURE, TERTIARY; RECOMBINANT PROTEINS; VARIATION (GENETICS);

METAZOA;

EID: 8844281536     PISSN: 10972765     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.molcel.2004.10.023     Document Type: Article

References (20)

1. Birdsall B., King R.W., Wheeler M.R., Lewis C.A. Jr., Goode S.R., Dunlap R.B., Roberts G.C. Correction for light absorption in fluorescence studies of protein-ligand interactions. Anal. Biochem. 132:1983;353-361
2. Chadwick B.P., Willard H.F. A novel chromatin protein, distantly related to histone H2A, is largely excluded from the inactive X chromosome. J. Cell Biol. 152:2001;375-384
3. Clarkson M.J., Wells J.R., Gibson F., Saint R., Tremethick D.J. Regions of variant histone His2AvD required for Drosophila development. Nature. 399:1999;694-697
4. Dorigo B., Schalch T., Bystricky K., Richmond T.J. Chromatin fiber folding. requirement for the histone H4 N-terminal tail J. Mol. Biol. 327:2003;85-96
5. Fan J.Y., Gordon F., Luger K., Hansen J.C., Tremethick D.J. The essential histone variant H2A.Z regulates the equilibrium between different chromatin conformational states. Nat. Struct. Biol. 9:2002;172-176
6. Fletcher T.M., Hansen J.C. The nucleosomal array. structure/function relationships Crit. Rev. Eukaryot. Gene Expr. 6:1996;149-188
7. Georgel P.T., Horowitz-Scherer R.A., Adkins N., Woodcock C.L., Wade P.A., Hansen J.C. Chromatin compaction by human MeCP2. Assembly of novel secondary chromatin structures in the absence of DNA methylation. J. Biol. Chem. 278:2003;32181-32188
8. Georgel P.T., Palacios DeBeer M.A., Pietz G., Fox C.A., Hansen J.C. Sir3-dependent assembly of supramolecular chromatin structures in vitro. Proc. Natl. Acad. Sci. USA. 98:2001;8584-8589
9. Grigoryev S.A., Bednar J., Woodcock C.L. MENT, a heterochromatin protein that mediates higher order chromatin folding, is a new serpin family member. J. Biol. Chem. 274:1999;5626-5636
10. Hansen J.C. Conformational dynamics of the chromatin fiber in solution. determinants, mechanisms, and functions Annu. Rev. Biophys. Biomol. Struct. 31:2002;361-392
11. Hansen J.C., Kreider J.I., Demeler B., Fletcher T.M. Analytical ultracentrifugation and agarose gel electrophoresis as tools for studying chromatin folding in solution. Methods. 12:1997;62-72
12. Jacobs S.A., Taverna S.D., Zhang Y., Briggs S.D., Li J., Eissenberg J.C., Allis C.D., Khorasanizadeh S. Specificity of the HP1 chromo domain for the methylated N-terminus of histone H3. EMBO J. 20:2001;5232-5241
13. Luger K., Mader A.W., Richmond R.K., Sargent D.F., Richmond T.J. Crystal structure of the nucleosome core particle at 2.8 Å resolution. Nature. 389:1997;251-260
14. Maison C., Bailly D., Peters A.H., Quivy J.P., Roche D., Taddei A., Lachner M., Jenuwein T., Almouzni G. Higher-order structure in pericentric heterochromatin involves a distinct pattern of histone modification and an RNA component. Nat. Genet. 30:2002;329-334
15. Nielsen A.L., Oulad-Abdelghani M., Ortiz J.A., Remboutsika E., Chambon P., Losson R. Heterochromatin formation in mammalian cells. interaction between histones and HP1 proteins Mol. Cell. 7:2001;729-739
16. Nielsen P.R., Nietlispach D., Mott H.R., Callaghan J., Bannister A., Kouzarides T., Murzin A.G., Murzina N.V., Laue E.D. Structure of the HP1 chromodomain bound to histone H3 methylated at lysine 9. Nature. 416:2002;103-107
17. Rangasamy D., Berven L., Ridgway P., Tremethick D.J. Pericentric heterochromatin becomes enriched with H2A.Z during early mammalian development. EMBO J. 22:2003;1599-1607
18. Rangasamy D., Greaves I., Tremethick D.J. RNA interference demonstrates a novel role for H2A.Z in chromosome segregation. Nat. Struct. Biol. 11:2004;650-655
19. Schwarz P.M., Felthauser A., Fletcher T.M., Hansen J.C. Reversible oligonucleosome self-association. dependence on divalent cations and core histone tail domains Biochemistry. 35:1996;4009-4015
20. Suto R.K., Clarkson M.J., Tremethick D.J., Luger K. Crystal structure of a nucleosome core particle containing the variant histone H2A.Z. Nat. Struct. Biol. 7:2000;1121-1124