Missing links: The role of primates in understanding the human microbiome

mSystems

Volumn 4, Issue 3, 2019, Pages

  Amato, Katherine R ^a  

^a NORTHWESTERN UNIVERSITY   (United States)

Author keywords

Gut microbiome; Life history; Primate

Indexed keywords

ALOUATTA; BIOENERGY; ENERGY BALANCE; FOOD AVAILABILITY; FORAGING BEHAVIOR; HOST MICROBE INTERACTION; INTESTINE FLORA; LIFE HISTORY; LIFE HISTORY TRAIT; LOCAL ADAPTATION; NONHUMAN; PHENOTYPIC PLASTICITY; PRIMATE; REPRODUCTIVE SUCCESS; REVIEW; SEASONAL VARIATION;

EID: 85067406338     PISSN: None     EISSN: 23795077     Source Type: Journal    
DOI: 10.1128/mSystems.00165-19     Document Type: Review

References (15)

1. Ley RE, Backhed F, Turnbaugh PJ, Lozupone C, Knight R, Gordon JI. 2005. Obesity alters gut microbial ecology. Proc Natl Acad Sci U S A 102: 11070 –11075. https://doi.org/10.1073/pnas.0504978102.
2. Turnbaugh PJ, Ley RE, Mahowald MA, Magrini V, Mardis ER, Gordon JI. 2006. An obesity-associated gut microbiome with increased capacity for energy harvest. Nature 444:1027–1031. https://doi.org/10.1038/nature05414.
3. Milton K. 1980. The foraging strategy of howler monkeys. Columbia University Press, New York, NY.
4. Milton K, Van Soest P, Robertson J. 1980. Digestive efficiencies of wild howler monkeys. Physiol Zool 53:402–409. https://doi.org/10.1086/physzool.53.4.30157878.
5. Ridaura VK, Faith JJ, Rey FE, Cheng J, Duncan AE, Kau AL, Griffin NW, Lombard V, Henrissat B, Bain JR, Muehlbauer MJ, Ilkayeva O, Semenk-ovich CF, Funai K, Hayashi DK, Lyle BK, Martini MC, Ursell LK, Clemente JC, Van Treuren W, Walters WA, Knight R, Newgard CB, Heath AC, Gordon JI. 2013. Gut microbiota from twins discordant for obesity modulate metabolism in mice. Science 341:1069 –1070. https://doi.org/10.1126/science.1243787.
6. Lin HV, Frassetto A, Kowalik EJ, Nawrocki AR, Lu MM, Kosinski JR, Hubert JA, Szeto D, Yao X, Forrest G, Marsh DJ. 2012. Butyrate and propionate protect against diet-induced obesity and regulate gut hormones via free fatty acid receptor 3-independent mechanisms. PLoS One 7:e35240. https://doi.org/10.1371/journal.pone.0035240.
7. Gao Z, Yin J, Zhang J, Ward RE, Martin RJ, Lefevre M, Cefalu WT, Ye J. 2009. Butyrate improves insulin sensitivity and increases energy expenditure in mice. Diabetes 58:1509–1517. https://doi.org/10.2337/db08-1637.
8. Caesar R, Reigstad CS, Backhed HK, Reinhardt C, Ketonen M, Lunden GO, Cani PD, Backhed F. 2012. Gut-derived lipopolysaccharide augments adipose macrophage accumulation but is not essential for impaired glucose or insulin tolerance in mice. Gut 61:1701–1707. https://doi.org/10.1136/gutjnl-2011-301689.
9. Mallott EK, Amato KR. 2018. The microbial reproductive ecology of white-faced capuchins (Cebus capucinus). Am J Primatol 80:e22896. https://doi.org/10.1002/ajp.22896.
10. Gomez A, Rothman JM, Petrzelkova KJ, Yeoman CJ, Vlckova K, Umana JD, Carr M, Modry D, Todd A, Torralba M, Nelson KE, Stumpf RM, Wilson BA, Blekhman R, White BA, Leigh SR. 2016. Temporal variation selects for diet-microbe co-metabolic traits in the gut of Gorilla spp. ISME J 10: 514 –526. https://doi.org/10.1038/ismej.2015.146.
11. Springer A, Fichtel C, Al-Ghalith GA, Koch F, Amato KR, Clayton JB, Knights D, Kappeler PM. 2017. Patterns of seasonality and group membership characterize the gut microbiota in a longitudinal study of wild Verreaux’s sifakas (Propithecus verreauxi). Ecol Evol 7:5732–5745. https://doi.org/10.1002/ece3.3148.
12. Sun B, Wang X, Bernstein S, Huffman MA, Xia D-P, Gu Z, Chen R, Sheeran LK, Wagner RS, Li J. 2016. Marked variation between winter and spring gut microbiota in free-ranging Tibetan macaques (Macaca thibetana). Sci Rep 6:26035. https://doi.org/10.1038/srep26035.
13. Trosvik P, Rueness EK, Muinck EJ, Moges A, Mekonnen A. 2018. Ecological plasticity in the gastrointestinal microbiomes of Ethiopian Chlorocebus monkeys. Sci Rep 8:20. https://doi.org/10.1038/s41598-017-18435-2.
14. Amato KR, Martinez-Mota R, Righini N, Raguet-Schofield M, Corcione FP, Marini E, Humphrey G, Gogul G, Gaffney J, Lovelace E, Williams L, Luong A, Dominguez-Bello MG, Stumpf RM, White B, Nelson KE, Knight R, Leigh SR. 2016. Phylogenetic and ecological factors impact the gut microbiota of neotropical primate species. Oecologia 180:717–733. https://doi.org/10.1007/s00442-015-3507-z.
15. Orkin JD, Campos FA, Myers MS, Hernandez SEC, Guadamuz A, Melin AD. 2019. Seasonality of the gut microbiota of free-ranging white-faced capuchins in a tropical dry forest. ISME J 13:183. https://doi.org/10.1038/s41396-018-0256-0.