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Volumn 20, Issue 1, 2019, Pages

Degradation of endogenous proteins and generation of a null-like phenotype in zebrafish using Trim-Away technology

Author keywords

Knockdown; Protein degradation; Trim away; TRIM21

Indexed keywords

PROTEIN ANTIBODY; TRIM21 PROTEIN; TRIPARTITE MOTIF PROTEIN; UNCLASSIFIED DRUG; RIBONUCLEOPROTEIN; SS-A ANTIGEN;

EID: 85060376265     PISSN: 14747596     EISSN: 1474760X     Source Type: Journal    
DOI: 10.1186/s13059-019-1624-4     Document Type: Article
Times cited : (28)

References (25)
  • 1
    • 0024494423 scopus 로고
    • Germ line transmission and expression of a corrected HPRT gene produced by gene targeting in embryonic stem cells
    • 1:CAS:528:DyaL1MXhs1Oit7s%3D
    • Thompson S, Clarke AR, Pow AM, Hooper ML, Melton DW. Germ line transmission and expression of a corrected HPRT gene produced by gene targeting in embryonic stem cells. Cell. 1989;56:313-21.
    • (1989) Cell , vol.56 , pp. 313-321
    • Thompson, S.1    Clarke, A.R.2    Pow, A.M.3    Hooper, M.L.4    Melton, D.W.5
  • 2
    • 84904615174 scopus 로고    scopus 로고
    • TALEN-mediated genome editing: Prospects and perspectives
    • 1:CAS:528:DC%2BC2cXht1Wqt73L
    • Wright DA, Li T, Yang B, Spalding MH. TALEN-mediated genome editing: prospects and perspectives. Biochem J. 2014;462:15-24.
    • (2014) Biochem J , vol.462 , pp. 15-24
    • Wright, D.A.1    Li, T.2    Yang, B.3    Spalding, M.H.4
  • 3
    • 84913594397 scopus 로고    scopus 로고
    • Genome editing the new frontier of genome engineering with CRISPR-Cas9
    • Doudna JA, Charpentier E. Genome editing. The new frontier of genome engineering with CRISPR-Cas9. Science. 2014;346:1258096.
    • (2014) Science , vol.346 , pp. 1258096
    • Doudna, J.A.1    Charpentier, E.2
  • 4
    • 4644350944 scopus 로고    scopus 로고
    • Unlocking the potential of the human genome with RNA interference
    • 1:CAS:528:DC%2BD2cXnsFaiu7s%3D
    • Hannon GJ, Rossi JJ. Unlocking the potential of the human genome with RNA interference. Nature. 2004;431:371-8.
    • (2004) Nature , vol.431 , pp. 371-378
    • Hannon, G.J.1    Rossi, J.J.2
  • 6
    • 34447335278 scopus 로고    scopus 로고
    • Structural basis for PRYSPRY-mediated tripartite motif (TRIM) protein function
    • 1:CAS:528:DC%2BD2sXks1artbc%3D
    • James LC, Keeble AH, Khan Z, Rhodes DA, Trowsdale J. Structural basis for PRYSPRY-mediated tripartite motif (TRIM) protein function. Proc Natl Acad Sci U S A. 2007;104:6200-5.
    • (2007) Proc Natl Acad Sci U S A , vol.104 , pp. 6200-6205
    • James, L.C.1    Keeble, A.H.2    Khan, Z.3    Rhodes, D.A.4    Trowsdale, J.5
  • 8
    • 85028331033 scopus 로고    scopus 로고
    • TRIM21 and the function of antibodies inside cells
    • 1:CAS:528:DC%2BC2sXht1Grsb%2FF
    • Rhodes DA, Isenberg DA. TRIM21 and the function of antibodies inside cells. Trends Immunol. 2017;38:916-26.
    • (2017) Trends Immunol , vol.38 , pp. 916-926
    • Rhodes, D.A.1    Isenberg, D.A.2
  • 9
  • 10
    • 0033517108 scopus 로고    scopus 로고
    • Dbp5, a DEAD-box protein required for mRNA export, is recruited to the cytoplasmic fibrils of nuclear pore complex via a conserved interaction with CAN/Nup159p
    • 1:CAS:528:DyaK1MXlt1Gqsb0%3D
    • Schmitt C, von Kobbe C, Bachi A, Pante N, Rodrigues JP, Boscheron C, Rigaut G, Wilm M, Seraphin B, Carmo-Fonseca M, Izaurralde E. Dbp5, a DEAD-box protein required for mRNA export, is recruited to the cytoplasmic fibrils of nuclear pore complex via a conserved interaction with CAN/Nup159p. EMBO J. 1999;18:4332-47.
    • (1999) EMBO J , vol.18 , pp. 4332-4347
    • Schmitt, C.1    Von Kobbe, C.2    Bachi, A.3    Pante, N.4    Rodrigues, J.P.5    Boscheron, C.6    Rigaut, G.7    Wilm, M.8    Seraphin, B.9    Carmo-Fonseca, M.10    Izaurralde, E.11
  • 12
    • 85016264392 scopus 로고    scopus 로고
    • An ATR-dependent function for the Ddx19 RNA helicase in nuclear R-loop metabolism
    • 1:CAS:528:DC%2BC2sXktl2jsbs%3D
    • Hodroj D, Recolin B, Serhal K, Martinez S, Tsanov N, Abou Merhi R, Maiorano D. An ATR-dependent function for the Ddx19 RNA helicase in nuclear R-loop metabolism. EMBO J. 2017;36:1182-98.
    • (2017) EMBO J , vol.36 , pp. 1182-1198
    • Hodroj, D.1    Recolin, B.2    Serhal, K.3    Martinez, S.4    Tsanov, N.5    Abou Merhi, R.6    Maiorano, D.7
  • 13
    • 84882788354 scopus 로고    scopus 로고
    • Efficient multiplex biallelic zebrafish genome editing using a CRISPR nuclease system
    • 1:CAS:528:DC%2BC3sXhtlKqu7nP
    • Jao LE, Wente SR, Chen W. Efficient multiplex biallelic zebrafish genome editing using a CRISPR nuclease system. Proc Natl Acad Sci U S A. 2013;110:13904-9.
    • (2013) Proc Natl Acad Sci U S A , vol.110 , pp. 13904-13909
    • Jao, L.E.1    Wente, S.R.2    Chen, W.3
  • 15
    • 85033232767 scopus 로고    scopus 로고
    • Guidelines for morpholino use in zebrafish
    • Stainier DYR, Raz E. Guidelines for morpholino use in zebrafish. PLoS Genet. 2017;13:e1007000.
    • (2017) PLoS Genet , vol.13 , pp. e1007000
    • Stainier, D.Y.R.1    Raz, E.2
  • 16
    • 0035905766 scopus 로고    scopus 로고
    • Role for a bidentate ribonuclease in the initiation step of RNA interference
    • 1:CAS:528:DC%2BD3MXms12ksA%3D%3D
    • Bernstein E, Caudy AA, Hammond SM, Hannon GJ. Role for a bidentate ribonuclease in the initiation step of RNA interference. Nature. 2001;409:363-6.
    • (2001) Nature , vol.409 , pp. 363-366
    • Bernstein, E.1    Caudy, A.A.2    Hammond, S.M.3    Hannon, G.J.4
  • 17
    • 0242266618 scopus 로고    scopus 로고
    • The microRNA-producing enzyme Dicer1 is essential for zebrafish development
    • 1:CAS:528:DC%2BD3sXosFWrtr0%3D
    • Wienholds E, Koudijs MJ, van Eeden FJ, Cuppen E, Plasterk RH. The microRNA-producing enzyme Dicer1 is essential for zebrafish development. Nat Genet. 2003;35:217-8.
    • (2003) Nat Genet , vol.35 , pp. 217-218
    • Wienholds, E.1    Koudijs, M.J.2    Van Eeden, F.J.3    Cuppen, E.4    Plasterk, R.H.5
  • 19
    • 0032824044 scopus 로고    scopus 로고
    • Nacre encodes a zebrafish microphthalmia-related protein that regulates neural-crest-derived pigment cell fate
    • 1:CAS:528:DyaK1MXmtlOitrw%3D 10433906
    • Lister JA, Robertson CP, Lepage T, Johnson SL, Raible DW. nacre encodes a zebrafish microphthalmia-related protein that regulates neural-crest-derived pigment cell fate. Development. 1999;126:3757-67.
    • (1999) Development , vol.126 , pp. 3757-3767
    • Lister, J.A.1    Robertson, C.P.2    Lepage, T.3    Johnson, S.L.4    Raible, D.W.5
  • 20
    • 57049091596 scopus 로고    scopus 로고
    • Transcriptional and signaling regulation in neural crest stem cell-derived melanocyte development: Do all roads lead to Mitf?
    • 1:CAS:528:DC%2BD1cXhsVens7%2FK
    • Hou L, Pavan WJ. Transcriptional and signaling regulation in neural crest stem cell-derived melanocyte development: do all roads lead to Mitf? Cell Res. 2008;18:1163-76.
    • (2008) Cell Res , vol.18 , pp. 1163-1176
    • Hou, L.1    Pavan, W.J.2
  • 21
    • 84873724508 scopus 로고    scopus 로고
    • On the embryonic origin of adult melanophores: The role of ErbB and Kit signalling in establishing melanophore stem cells in zebrafish
    • 1:CAS:528:DC%2BC3sXovFelur0%3D
    • Dooley CM, Mongera A, Walderich B, Nusslein-Volhard C. On the embryonic origin of adult melanophores: the role of ErbB and Kit signalling in establishing melanophore stem cells in zebrafish. Development. 2013;140:1003-13.
    • (2013) Development , vol.140 , pp. 1003-1013
    • Dooley, C.M.1    Mongera, A.2    Walderich, B.3    Nusslein-Volhard, C.4
  • 22
    • 7744224411 scopus 로고    scopus 로고
    • A requirement for kit in embryonic zebrafish melanocyte differentiation is revealed by melanoblast delay
    • 1:CAS:528:DC%2BD2cXot1ylsL4%3D 15300437
    • Mellgren EM, Johnson SL. A requirement for kit in embryonic zebrafish melanocyte differentiation is revealed by melanoblast delay. Dev Genes Evol. 2004;214:493-502.
    • (2004) Dev Genes Evol , vol.214 , pp. 493-502
    • Mellgren, E.M.1    Johnson, S.L.2
  • 23
    • 78650904238 scopus 로고    scopus 로고
    • Functional null mutations of MSRB3 encoding methionine sulfoxide reductase are associated with human deafness DFNB74
    • 1:CAS:528:DC%2BC3MXktVamtg%3D%3D
    • Ahmed ZM, Yousaf R, Lee BC, Khan SN, Lee S, Lee K, Husnain T, Rehman AU, Bonneux S, Ansar M, et al. Functional null mutations of MSRB3 encoding methionine sulfoxide reductase are associated with human deafness DFNB74. Am J Hum Genet. 2011;88:19-29.
    • (2011) Am J Hum Genet , vol.88 , pp. 19-29
    • Ahmed, Z.M.1    Yousaf, R.2    Lee, B.C.3    Khan, S.N.4    Lee, S.5    Lee, K.6    Husnain, T.7    Rehman, A.U.8    Bonneux, S.9    Ansar, M.10
  • 24
    • 84894309285 scopus 로고    scopus 로고
    • Methionine sulfoxide reductase B3 deficiency causes hearing loss due to stereocilia degeneration and apoptotic cell death in cochlear hair cells
    • 1:CAS:528:DC%2BC2cXivFOntL8%3D
    • Kwon TJ, Cho HJ, Kim UK, Lee E, Oh SK, Bok J, Bae YC, Yi JK, Lee JW, Ryoo ZY, et al. Methionine sulfoxide reductase B3 deficiency causes hearing loss due to stereocilia degeneration and apoptotic cell death in cochlear hair cells. Hum Mol Genet. 2014;23:1591-601.
    • (2014) Hum Mol Genet , vol.23 , pp. 1591-1601
    • Kwon, T.J.1    Cho, H.J.2    Kim, U.K.3    Lee, E.4    Oh, S.K.5    Bok, J.6    Bae, Y.C.7    Yi, J.K.8    Lee, J.W.9    Ryoo, Z.Y.10
  • 25
    • 84944249765 scopus 로고    scopus 로고
    • Down-regulation of msrb3 and destruction of normal auditory system development through hair cell apoptosis in zebrafish
    • 1:CAS:528:DC%2BC28XpsFOksro%3D
    • Shen X, Liu F, Wang Y, Wang H, Ma J, Xia W, Zhang J, Jiang N, Sun S, Wang X, Ma D. Down-regulation of msrb3 and destruction of normal auditory system development through hair cell apoptosis in zebrafish. Int J Dev Biol. 2015;59:195-203.
    • (2015) Int J Dev Biol , vol.59 , pp. 195-203
    • Shen, X.1    Liu, F.2    Wang, Y.3    Wang, H.4    Ma, J.5    Xia, W.6    Zhang, J.7    Jiang, N.8    Sun, S.9    Wang, X.10    Ma, D.11


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.