Microbial interactions in soil

Modern Soil Microbiology, Second Edition

Volumn , Issue , 2006, Pages 177-210

  Van Elsas, Jan Dirk ^a   Tam, Ling ^b   Finlay, Roger D ^c   Killham, Ken ^d   Trevors, Jack T ^b  

^a UNIVERSITY MEDICAL CENTER GRONINGEN   (Netherlands)

^b UNIVERSITY OF GUELPH   (Canada)

^c SWEDISH UNIVERSITY OF AGRICULTURAL SCIENCES   (Sweden)

^d UNIVERSITY OF ABERDEEN   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 85057429119     PISSN: None     EISSN: None     Source Type: Book    
DOI: None     Document Type: Chapter

References (37)

1. Brading, M. G., Jass, J., and Lappin-Scott, H. M., Dynamics of bacterial biofilm formation, In Microbial Biofilms, Lappin-Scott, H. M. and Costerton, J. W., Eds., Cambridge University Press, Cambridge, MA, pp. 46-65, 1995.
2. Whipps, J. M., Microbial interactions and biocontrol in the rhizosphere, Journal of Experimental Botany, 52, 487-511, 2001.
3. Moller, S., Sternberg, C., Anderson, J. B., Christensen, B. B., Ramos, J. L., Givskov, M., and Molin, S., In situ gene expression in mixed-culture biofilms:evidence of metabolic interactions between community members, Applied and Environmental Microbiology, 64, 721-732, 1998.
4. Tolker-Nielsen, T. and Molin, S., Spatial organization of microbial biofilm communities, Microbial Ecology, 40, 75-84, 2000.
5. Batchelor, S. E., Cooper, M., Chhabra, S. R., Glover, L. A., Steward, G. S. A. B., Williams, P., and Prosser, J. I., Cell density-regulated recovery of starved biofilm populations of ammonia-oxidizing bacteria, Applied and Environmental Microbiology, 63, 2281-2286, 1997.
6. Whiteley, M., Lee, K. M., and Greenberg, E. P., Identification of genes controlled by quorum sensing in Pseudomonas aeruginosa. PNAS, 96, 13904-13907, 1999.
7. Eberl, L., N-acyl homoserinelactone-mediated gene regulation in Gramnegative bacteria, Systematic and Applied Microbiology, 22, 493-506, 1999.
8. Bassler, B. L., How bacteria talk to each other: regulation of gene expression by quorum sensing, Current Opinion in Microbiology, 2, 582-587, 1999.
9. Elasri, M., Delorme, S., Lemanceau, P., Stewart, G., Laue, B., Glickmann, E., Oger, P. M., and Dessaux, Y., Acyl-homoserine lactone production is more common among plant-associated Pseudomonas spp. than among soilborne Pseudomonas, Applied and Environmental Microbiology, 67, 1198-1209, 2001.
10. Gantner, S., Schmid, M., Durr, C., Schuhegger, R., Steidle, A., Hutzler, P., Langebartels, P., Eberl, L., Hartmann, A., and Dazzo, F. B., In situ quantitation of the spatial scale of calling distances and population density-independent N-acylhomoserine lactone-mediated communication by rhizobacteria colonized on plant roots, FEMS Microbiology Ecology, 56, 188-194, 2006.
11. Dong, Y. H., Xu, J. L., Li, X. Z., and Zhang, L. H., AiiA, an enzyme that inactivates the acylhomoserine lactone quorum-sensing signal and attenuates the virulence of Erwinia carotovora, PNAS, 97, 3526-3531, 2000.
12. Uroz, S., dÁngelo-Picard, C., Carlier, A., Elasri, M., Sicot, C., Petit, A., Oger, P., Faure, D., and Dessaux, Y., Novel bacteria degrading N-acyl homoserine lactones and their use as quenchers of quorum-sensing-regulated functions of plant-pathogenic bacteria, Microbiology, 149, 1981-1989, 2003.
13. Lin, Y. H., Xu, J. L., Hu, J., Wang, L. H., Ong, S. L., Leadbetter, J. R., and Zhang, L. H., Acyl-homoserine lactone acylase from Ralstonia strain XJ12B represents a novel and potent class of quorum-sensing enzymes, Molecular Microbiology, 47, 849-860, 2003.
14. Mathesius, U., Mulders, S., Gao, M., Teplitski, M., Caetano-Anolles, G., Rolfe, B. G., and Bauer, W. D., Extensive and specific responses of a eukaryote to bacterial quorum-sensing signals, PNAS, 100, 1444-1449, 2003.
15. Bauer, W. D., Mathesius, U., and Teplitski, M., Eukaryotes deal with bacterial quorum sensing, ASM News, 71, 129-135, 2005.
16. Ugalde, U., Autoregulatory signals in mycelial fungi, In The Mycota, Growth, Differentiation and Sexuality, Kües, U. and Fischer, R., Eds., Vol. I, Springer, Berlin, pp. 203-213, 2006.
17. Glass, N. L., Rasmussen, C., Gabriela, M., and Read, N. L., Hyphal homing, fusion and mycelial interconnectedness, Trends in Microbiology, 12, 135-141, 2004.
18. Shimek, C. and Wöstemeyer, J., Pheromone action in the fungal groups Chytridiomycota and Zygomycota, and in the Oomycota, In The Mycota, Growth, Differentiation and Sexuality, Kües, U. and Fischer, R., Eds., Vol. I, Springer, Berlin, 2006
19. Chen, H., Fujita, M., Feng, Q., Clardy, J., and Fink, G. R., Tyrosol is a quorum sensing molecule in Candida albicans, PNAS, 101, 5048-5052, 2004.
20. Lu, B. C. K., Programmed cell death in fungi, In The Mycota, Growth Differentiation and Sexuality, Kües, U. and Fischer, R., Eds., Vol. I, Springer, Berlin, 2006.
21. De Boer, W., Folman, L. B., Summerbell, L. C., and Boddy, L., Living in a fungal world: impact of fungi on soil bacterial niche development, FEMS Microbiology Reviews, 29, 795-811, 2005.
22. Douglas, A. E., Strategies in antagonistic and cooperative interactions, In Microbial Evolution, Miller, R. V. and Day, M. J., Eds., ASM Press, Washington, DC, pp. 275-289, 2004.
23. Wolfaardt, G. M., Lawrence, J. R., Roberts, R. D., Caldwell, S. J., and Caldwell, D. E., Multicellular organization in a degradative biofilm community, Applied and Environmental Microbiology, 60, 434-446, 1994.
24. Ueda, K., Yamashita, A., Ishikawa, J., Shimada, M., Watsuji, T., Morimura, K., Ikeda, H., Hattori, M., and Beppu, T., Genome sequence of Symbiobacterium thermophilum, an uncultivable bacterium that depends on microbial commensalism. Nucleic Acids Research, 32, 4937-4944, 2004.
25. Wiener, P., Antibiotic production in a spatially structured environment, Ecology Letters, 3, 122-130, 2000.
26. Deacon, J., Fungal Biology, 4th ed., Blackwell, Oxford, 2006.
27. Cronin, D., Moenne-Loccoz, Y., Fenton, A., Dunne, C., Dowling, D. N., and O’Gara, F., Ecological interaction of a biocontrol Pseudomonas fluorescens strain producing 2,4 diacetyl phloroglucinol with the soft rot potato pathogen Erwinia carotovora subsp. atroseptica, FEMS Microbiology Ecology, 23, 95-106, 1997.
28. Pagie, L. and Hogeweg, P., Colicin diversity: a result of eco-evolutionary dynamics, Journal of Theoretical Biology, 196, 251-261, 1999.
29. Dawid, W., Biology and global distribution of myxobacteria in soils, FEMS Microbiology Reviews, 24, 403-427, 2000.
30. Johansson, J. F., Paul, L. R., and Finlay, R. D., Microbial interactions in the mycorrhizosphere and their significance for sustainable agriculture, FEMS Microbiology Ecology, 48, 1-13, 2004.
31. Biancotto, V. and Bonfante, P., Arbuscular mycorrhizal fungi: a specialised niche for rhizospheric and endocellular bacteria, Antonie Van Leeuwenhoek, 81, 365-371, 2002.
32. Jargeat, P., Cosseau, C., Ola’h, B., Jauneau, A., Bonfante, P., Batut, J., and Becard, G., Isolation, free-living capacities, and genome structure of “Candidatus Glomeribacter gigasporarum,” the endocellular bacterium of the mycorrhizal fungus Gigaspora margarita, Journal of Bacteriology, 186, 6876-6884, 2004.
33. Christensen, B. B., Haagensen, J. A. J., Heydorn, A., and Molin, S., Metabolic commensalisms and competition in a two-species microbial consortium, Applied and Environmental Microbiology, 68, 2495-2502, 2002.
34. Hornby, J. M., Jensen, E. C., Lisec, A. D., Tasto, J. J., Jahnke, B., Shoemaker, R., Dussault, P., and Nickerson, K. W., Quorum sensing in the dimorphic fungus Candida albicans is mediated by farnesol, Applied and Environmental Microbiology, 67, 2982-2992, 2001.
35. McLean, R. J. C., Whiteley, M., Stickler, D. J., and Fuqua, W. C., Evidence of autoinducer activity in naturally occurring biofilms, FEMS Microbiology Letters, 154, 259-263, 1997.
36. Miller, M. B. and Bassler, B. L., Quorum sensing in bacteria, Annual Review of Microbiology, 55, 165-199, 2001.
37. Olsson, S. and Hansson, B. S., Action potential-like activity found in fungal mycelia is sensitive to stimulation, Naturwissenschaften, 82, 30-31, 1995.