Exploiting germplasm resources for climate- change adaptation in faba bean

Applied Mathematics and Omics to Assess Crop Genetic Resources for Climate Change Adaptive Traits

Volumn , Issue , 2016, Pages 207-214

  Stoddard, F L ^a   Khazaei, H ^b   Belachew, K Y ^a  

^a UNIVERSITY OF HELSINKI   (Finland)

^b UNIVERSITY OF SASKATCHEWAN   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

CONSERVATION;

CLIMATE CHANGE ADAPTATION; FABA BEANS; GERMPLASMS;

CLIMATE CHANGE;

EID: 85051157737     PISSN: None     EISSN: None     Source Type: Book    
DOI: None     Document Type: Chapter

References (28)

1. Bouxin, A. 2014. Food and feed statistical yearbook 2013. Brussels, Belgium: FEFAC, European Feed Manufacturers' Association.
2. Bues, A., S. Preissel, M. Reckling et al. 2013. The environmental role of protein crops in the new Common Agricultural Policy, Study. European Parliament, Directorate General for Internal Policies, Policy Department B: Structural and Cohesion Policies, Agricultural and Rural Development IP/B/AGRI/IC/2012-067. doi:10.2861/27627. ht tp://www.europarl.europa.eu/RegData/etudes/etudes/join/2013/495856/IPOL-AGRI_ET(2013)495856_EN.pdf.
3. Chandran, D., N. Sharopova, K.A. VandenBosch et al. 2008. Physiological and molecular characterization of aluminum resistance in Medicago truncatula. BMC Plant Biol 8:89. doi:10.1186/1471-2229-8-89.
4. Dai, A. 2013. Increasing drought under global warming in observations and models. Nature Climate Change 3:52-58. doi:10.1038/nclimate1633.
5. Duc, G., G. Sixdenier, M. Lila, and V. Furstoss. 1989. Search of genetic variability for vicine and convicine content in Vicia faba L. A first report of a gene which codes for nearly zero-vicine and zero-convicine contents. In Recent advances of research in antinutritional factors in legume seeds, eds. J. Huismann, T.F.B. van der Poel, and I.E. Liener, 305-313. Wageningen, The Netherlands: Pudoc.
6. Duressa, D., K. Soliman, and D. Chen. 2010. Identification of aluminum responsive genes in Al-tolerant soybean line PI 416937. Int J Genomics 2010:ID 164862. doi:10.1155/2010/164862.
7. Duursma, R.A., P. Payton, M.P. Bange et al. 2013. Near-optimal response of instantaneous transpiration efficiency to vapour pressure deficit, temperature and [CO2] in cotton (Gossypium hirsutum L.). Agr Forest Meteorol 168:168-176. doi:10.1016/j. agrformet.2012.09.005.
8. Elliott, J.E.M. and W.J. Whittington. 1978. The effect of soil pH on the severity of chocolate spot infection on field bean varieties. J Agr Sci Cambridge 91:563-567. doi:10.1017/S0021859600059943.
9. Elshire, R.J., J.C. Glaubitz, Q. Sun et al. 2011. A robust, simple genotyping-by-sequencing (GBS) approach for high diversity species. PLoS ONE 6:e19379. doi:10.1371/journal. pone.0019379.
10. Hebblethwaite, P.D., G.C. Hawtin, and P.J.W. Lutman. 1983. The husbandry of establishment and maintenance. Chapter 13. In The faba bean (Vicia faba L.), a basis for improvement, ed. P.D. Hebblethwaite, 271-312. London: Butterworth.
11. Hede, A.R., B. Skovmand, and J. López-Cesati. 2001. Acid soils and aluminum toxicity. Chapter 15. In Application of physiology in wheat breeding, eds. M.P. Reynolds, J.I. Ortiz-Monasterio, and A. McNab, 172-182. Mexico, DF: CIMMYT.
12. Khan, H.R., J.G. Paull, K.H.M. Siddique, and F.L. Stoddard. 2010. Faba bean breeding for drought-affected environments: A physiological and agronomic perspective. Field Crop Res 115:279-286. doi:10.1016/j.fcr.2009.09.003.
13. Khazaei, H., D.M. O'Sullivan, H. Jones et al. 2015. Flanking SNP markers for vicineconvicine concentration in faba bean (Vicia faba L.). Mol Breed 35:38. doi:10.1007/ s11032-015-0214-8.
14. Khazaei, H., D.M. O'Sullivan, M.J. Sillanpää, and F.L. Stoddard. 2014a. Genetic analysis reveals a novel locus in Vicia faba decoupling pigmentation in the flower from that in the extra-floral nectaries. Mol Breed 34:1507-1513. doi:10.1007/s11032-014-0100-9.
15. Khazaei, H., D.M. O'Sullivan, M.J. Sillanpää, and F.L. Stoddard. 2014b. Use of synteny to identify candidate genes underlying QTL controlling stomatal traits in faba bean (Vicia faba L.). Theor Appl Genet 127:2371-2385. doi:10.1007/s00122-014-2383-y.
16. Khazaei, H., F.L. Stoddard, C. Lizarazo, and K. Street. 2012. New sources of earliness for Finnish faba bean breeding. Paper presented at Maataloustieteenpäivät 2012, Viikki, Helsinki, Finland, January 10-11, 2012, ed. N. Schulman, 147. http://www.smts.fi/Kasvintuotanto_jalostuu/Khazaei_New%20sources.pdf.
17. Khazaei, H., K. Street, A. Bari, M. Mackay, and F.L. Stoddard. 2013a. The FIGS (Focused Identification of Germplasm Strategy) approach identifies traits related to drought adaptation in Vicia faba genetic resources. PLoS ONE 8:e63107. doi:10.1371/journal. pone.0063107.
18. Khazaei, H., K. Street, A. Santanen et al. 2013b. Do faba bean (Vicia faba L.) accessions from environments with contrasting seasonal moisture availabilities differ in stomatal characteristics and related traits? Genet Resour Crop Ev 60:2343-2357. doi:10.1007/ s10722-013-0002-4.
19. Lenis, J.M., J.D. Gillman, J.D. Lee, J.G. Shannon, and K.D. Bilyeu. 2010. Soybean seed lipoxygenase genes: Molecular characterization and development of molecular marker assays. Theor Appl Genet 120:1139-1149. doi:10.1007/s00122-009-1241-9.
20. Mackay, M. and K. Street. 2004. Focused identification of germplasm strategy-FIGS. In Proceedings of the 54th Australian cereal chemistry conference and the 11th wheat breeders' assembly, September 21-24, 2004, Canberra, ACT, Australia, eds. C.K. Black, J.F. Panozzo, and G.J. Rebetzke, 138-141. Melbourne, Australia: Cereal Chemistry Division, Royal Australian Chemical Institute (RACI).
21. Mascher, M., G.J. Muehlbauer, D.S. Rokhsar et al. 2013. Anchoring and ordering NGS contig assemblies by population sequencing (POPSEQ). Plant J 76:718-727. doi:10.1111/ tpj.12319.
22. Mobini, S.H., M. Luisdorf, T.D. Warkentin, and A. Vandenberg. 2015. Plant growth regulators improve in vitro flowering and rapid generation advancement in lentil and faba bean. In vitro Cell Dev Biol Plant 51:71-79. doi:10.1007/s11627-014-9647-8.
23. Rengel, Z. 2011. Soil pH, soil health and climate change. Chapter 4. In Soil health and climate change, soil biology, eds. B.P. Singh, A.L. Cowie, and K.Y. Chan, 69-86. Berlin, Germany: Springer-Verlag.
24. Stoddard, F.L., C. Balko, W. Erskine, H.R. Khan, W. Link, and A. Sarker. 2006. Screening techniques and sources of resistance to abiotic stresses in cool season food legumes. Euphytica 147:167-186. doi:10.1007/s10681-006-4723-8.
25. Stoddard, F.L. and K. Hämäläinen. 2011. Towards the world's earliest maturing faba beans. Grain Legumes 56:9-10.
26. Tesema, G., M. Argaw, and E. Adgo. 2012. Farmers soil management practices and their perceptions to soil acidity, at Ankesha District of Awi Zone, Northwestern Ethiopia. Libyan Agr Res Cent J Int 3:64-72.
27. Webb, A., A. Cottage, T. Wood et al. 2015. A SNP-based consensus genetic map for syntenybased trait targeting in faba bean (Vicia faba L.). Plant Biotech J (preprint version). doi:10.1111/pbi.12371.
28. Witcombe, J.R., P.A. Hollington, C.J. Howarth, S. Reader, and K.A. Steele. 2008. Breeding for abiotic stresses for sustainable agriculture. Philos T Roy Soc B 363:703-716. doi:10.1098/rstb.2007.2179.