-
1
-
-
79961030495
-
Global variation in the relative burden of stroke and ischemic heart disease
-
Kim, A. S. & Johnston, S. C. Global variation in the relative burden of stroke and ischemic heart disease. Circulation 124, 314-323 (2011).
-
(2011)
Circulation
, vol.124
, pp. 314-323
-
-
Kim, A.S.1
Johnston, S.C.2
-
2
-
-
0029299438
-
The response-to-retention hypothesis of early atherogenesis
-
Williams, K. J. & Tabas, I. The response-to-retention hypothesis of early atherogenesis. Arterioscler. Thromb. Vasc. Biol. 15, 551-61 (1995).
-
(1995)
Arterioscler. Thromb. Vasc. Biol.
, vol.15
, pp. 551-561
-
-
Williams, K.J.1
Tabas, I.2
-
3
-
-
0031761005
-
The response-to-retention hypothesis of atherogenesis reinforced
-
Williams, K. J. & Tabas, I. The response-to-retention hypothesis of atherogenesis reinforced. Curr. Opin. Lipidol. 9, 471-474 (1998).
-
(1998)
Curr. Opin. Lipidol.
, vol.9
, pp. 471-474
-
-
Williams, K.J.1
Tabas, I.2
-
4
-
-
0037180771
-
Inflammation in atherosclerosis
-
Libby, P. Inflammation in atherosclerosis. Nature 420, 868-74 (2002).
-
(2002)
Nature
, vol.420
, pp. 868-874
-
-
Libby, P.1
-
5
-
-
77954812247
-
Imaging of atherosclerosis: Carotid intima-media thickness
-
O'Leary, D. H. & Bots, M. L. Imaging of atherosclerosis: carotid intima-media thickness. Eur. Heart J. 31, 1682-1689 (2010).
-
(2010)
Eur. Heart J.
, vol.31
, pp. 1682-1689
-
-
O'Leary, D.H.1
Bots, M.L.2
-
6
-
-
84936805967
-
The relationship between carotid intima-media thickness and carotid plaque in the Northern Manhattan Study
-
Rundek, T. et al. The relationship between carotid intima-media thickness and carotid plaque in the Northern Manhattan Study. Atherosclerosis 241, 364-370 (2015).
-
(2015)
Atherosclerosis
, vol.241
, pp. 364-370
-
-
Rundek, T.1
-
7
-
-
0033769078
-
Origin of atherosclerosis in childhood and adolescence
-
McGill, H. C. J. et al. Origin of atherosclerosis in childhood and adolescence. in American Journal of Clinical Nutrition 72 (2000).
-
(2000)
American Journal of Clinical Nutrition
, vol.72
-
-
McGill, H.C.J.1
-
8
-
-
84875671435
-
A proteomic portrait of atherosclerosis
-
Eberini, I. et al. A proteomic portrait of atherosclerosis. J. Proteomics 82, 92-112 (2013).
-
(2013)
J. Proteomics
, vol.82
, pp. 92-112
-
-
Eberini, I.1
-
9
-
-
84857033576
-
The-omics era: Proteomics and lipidomics in vascular research
-
Didangelos, A., Stegemann, C. & Mayr, M. The-omics era: Proteomics and lipidomics in vascular research. Atherosclerosis 221, 12-17 (2012).
-
(2012)
Atherosclerosis
, vol.221
, pp. 12-17
-
-
Didangelos, A.1
Stegemann, C.2
Mayr, M.3
-
10
-
-
78249268797
-
Adiponectin is related with carotid artery intima-media thickness and brachial flow-mediated dilatation in young adults-the Cardiovascular Risk in Young Finns Study
-
Saarikoski, L. A. et al. Adiponectin is related with carotid artery intima-media thickness and brachial flow-mediated dilatation in young adults-the Cardiovascular Risk in Young Finns Study. Ann. Med. 42, 603-611 (2010).
-
(2010)
Ann. Med.
, vol.42
, pp. 603-611
-
-
Saarikoski, L.A.1
-
11
-
-
84867508714
-
Tissue inhibitor of matrix metalloproteinases 4 (TIMP4) in a population of young adults: Relations to cardiovascular risk markers and carotid artery intima-media thickness. The Cardiovascular Risk in Young Finns Study
-
Oikonen, M. et al. Tissue inhibitor of matrix metalloproteinases 4 (TIMP4) in a population of young adults: relations to cardiovascular risk markers and carotid artery intima-media thickness. The Cardiovascular Risk in Young Finns Study. Scand. J. Clin. Lab. Invest. 72, 540-546 (2012).
-
(2012)
Scand. J. Clin. Lab. Invest.
, vol.72
, pp. 540-546
-
-
Oikonen, M.1
-
12
-
-
84969419791
-
Biomarker Discovery in Serum from Patients with Carotid Atherosclerosis
-
DeGraba, T. J. et al. Biomarker Discovery in Serum from Patients with Carotid Atherosclerosis. Cerebrovasc. Dis. Extra 1, 115-129 (2011).
-
(2011)
Cerebrovasc. Dis. Extra
, vol.1
, pp. 115-129
-
-
DeGraba, T.J.1
-
13
-
-
84896806206
-
Plasma proteome profiling of atherosclerotic disease manifestations reveals elevated levels of the cytoskeletal protein vinculin
-
Kristensen, L. P. et al. Plasma proteome profiling of atherosclerotic disease manifestations reveals elevated levels of the cytoskeletal protein vinculin. J. Proteomics 101, 141-153 (2014).
-
(2014)
J. Proteomics
, vol.101
, pp. 141-153
-
-
Kristensen, L.P.1
-
14
-
-
84896282023
-
Local carotid atherosclerotic plaque proteins for the identification of circulating biomarkers in coronary patients
-
Malaud, E. et al. Local carotid atherosclerotic plaque proteins for the identification of circulating biomarkers in coronary patients. Atherosclerosis 233, 551-558 (2014).
-
(2014)
Atherosclerosis
, vol.233
, pp. 551-558
-
-
Malaud, E.1
-
15
-
-
77949370601
-
Follow-ups of the Cardiovascular Risk in Young Finns Study in 2001 and 2007: Levels and 6-year changes in risk factors
-
Raiko, J. R. et al. Follow-ups of the Cardiovascular Risk in Young Finns Study in 2001 and 2007: levels and 6-year changes in risk factors. J. Intern. Med. 267, 370-384 (2010).
-
(2010)
J. Intern. Med.
, vol.267
, pp. 370-384
-
-
Raiko, J.R.1
-
16
-
-
84865576726
-
Quantitative mass spectrometry in proteomics: Critical review update from 2007 to the present
-
Bantscheff, M., Lemeer, S., Savitski, M. M. & Kuster, B. Quantitative mass spectrometry in proteomics: Critical review update from 2007 to the present. Analytical and Bioanalytical Chemistry 404, 939-965 (2012).
-
(2012)
Analytical and Bioanalytical Chemistry
, vol.404
, pp. 939-965
-
-
Bantscheff, M.1
Lemeer, S.2
Savitski, M.M.3
Kuster, B.4
-
17
-
-
84860869167
-
Using iRT, a normalized retention time for more targeted measurement of peptides
-
Escher, C. et al. Using iRT, a normalized retention time for more targeted measurement of peptides. Proteomics 12, 1111-1121 (2012).
-
(2012)
Proteomics
, vol.12
, pp. 1111-1121
-
-
Escher, C.1
-
18
-
-
0346463134
-
Fibulins: Physiological and disease perspectives
-
Argraves, W. S., Greene, L. M., Cooley, M. A. & Gallagher, W. M. Fibulins: physiological and disease perspectives. EMBO Rep. 4, 1127-1131 (2003).
-
(2003)
EMBO Rep.
, vol.4
, pp. 1127-1131
-
-
Argraves, W.S.1
Greene, L.M.2
Cooley, M.A.3
Gallagher, W.M.4
-
19
-
-
0345975510
-
Alteration of plasma fibulin-1 concentrations in ischemic heart diseases
-
Kawata, K., Tanaka, A., Arai, M., Argraves, W. S. & Fukutake, K. Alteration of plasma fibulin-1 concentrations in ischemic heart diseases. Jpn. J. Thromb. Hemost. 12, 126-132 (2001).
-
(2001)
Jpn. J. Thromb. Hemost.
, vol.12
, pp. 126-132
-
-
Kawata, K.1
Tanaka, A.2
Arai, M.3
Argraves, W.S.4
Fukutake, K.5
-
20
-
-
84880183610
-
Plasma levels of the arterial wall protein fibulin-1 are associated with carotid-femoral pulse wave velocity: A cross-sectional study
-
Laugesen, E. et al. Plasma levels of the arterial wall protein fibulin-1 are associated with carotid-femoral pulse wave velocity: A cross-sectional study. Cardiovasc. Diabetol. 12 (2013).
-
(2013)
Cardiovasc. Diabetol.
, vol.12
-
-
Laugesen, E.1
-
21
-
-
80055091636
-
Fibulin-1 is a marker for arterial extracellular matrix alterations in type 2 diabetes
-
Cangemi, C. et al. Fibulin-1 is a marker for arterial extracellular matrix alterations in type 2 diabetes. Clin. Chem. 57, 1556-1565 (2011).
-
(2011)
Clin. Chem.
, vol.57
, pp. 1556-1565
-
-
Cangemi, C.1
-
22
-
-
72849134088
-
Fibulin-1 and fibrinogen in human atherosclerotic lesions
-
Argraves, W. S. et al. Fibulin-1 and fibrinogen in human atherosclerotic lesions. Histochem. Cell Biol. 132, 559-565 (2009).
-
(2009)
Histochem. Cell Biol.
, vol.132
, pp. 559-565
-
-
Argraves, W.S.1
-
23
-
-
84956579426
-
Association between Fibulin-1 and Aortic Augmentation Index in Male Patients with Peripheral Arterial Disease
-
Paapstel, K. et al. Association Between Fibulin-1 and Aortic Augmentation Index in Male Patients with Peripheral Arterial Disease. Eur. J. Vasc. Endovasc. Surg. 51, 76-82 (2016).
-
(2016)
Eur. J. Vasc. Endovasc. Surg.
, vol.51
, pp. 76-82
-
-
Paapstel, K.1
-
24
-
-
0035133615
-
Association between arterial stiffness and atherosclerosis: The Rotterdam study
-
Van Popele, N. M. et al. Association between arterial stiffness and atherosclerosis: The Rotterdam study. Stroke 32, 454-460 (2001).
-
(2001)
Stroke
, vol.32
, pp. 454-460
-
-
Van Popele, N.M.1
-
25
-
-
84949097665
-
Total and isoform-specific quantitative assessment of circulating fibulin-1 using selected reaction monitoring MS and time-resolved immunofluorometry
-
Overgaard, M., Cangemi, C., Jensen, M. L., Argraves, W. S. & Rasmussen, L. M. Total and isoform-specific quantitative assessment of circulating fibulin-1 using selected reaction monitoring MS and time-resolved immunofluorometry. Proteomics-Clin. Appl. 9, 767-775 (2015).
-
(2015)
Proteomics-Clin. Appl.
, vol.9
, pp. 767-775
-
-
Overgaard, M.1
Cangemi, C.2
Jensen, M.L.3
Argraves, W.S.4
Rasmussen, L.M.5
-
26
-
-
84874625369
-
Proteoform: A single term describing protein complexity
-
Smith, L. M. & Kelleher, N. L. Proteoform: A single term describing protein complexity. Nature Methods 10, 186-187 (2013).
-
(2013)
Nature Methods
, vol.10
, pp. 186-187
-
-
Smith, L.M.1
Kelleher, N.L.2
-
27
-
-
84861339785
-
Secretome analysis of atherosclerotic and non-atherosclerotic arteries reveals dynamic extracellular remodeling during pathogenesis
-
de la Cuesta, F. et al. Secretome analysis of atherosclerotic and non-atherosclerotic arteries reveals dynamic extracellular remodeling during pathogenesis. J. Proteomics 75, 2960-2971 (2012).
-
(2012)
J. Proteomics
, vol.75
, pp. 2960-2971
-
-
De La Cuesta, F.1
-
28
-
-
84906334267
-
Atherosclerosis: Process, indicators, risk factors and new hopes
-
Rafieian-Kopaei, M., Setorki, M., Doudi, M., Baradaran, A. & Nasri, H. Atherosclerosis: Process, indicators, risk factors and new hopes. International Journal of Preventive Medicine 5, 927-946 (2014).
-
(2014)
International Journal of Preventive Medicine
, vol.5
, pp. 927-946
-
-
Rafieian-Kopaei, M.1
Setorki, M.2
Doudi, M.3
Baradaran, A.4
Nasri, H.5
-
29
-
-
85009752600
-
Quit smoking to outsmart atherogenesis: Molecular mechanisms underlying clinical evidence
-
Gambardella, J., Sardu, C., Sacra, C., Del Giudice, C. & Santulli, G. Quit smoking to outsmart atherogenesis: Molecular mechanisms underlying clinical evidence. Atherosclerosis 257, 242-245 (2017).
-
(2017)
Atherosclerosis
, vol.257
, pp. 242-245
-
-
Gambardella, J.1
Sardu, C.2
Sacra, C.3
Del Giudice, C.4
Santulli, G.5
-
30
-
-
0242410275
-
Cardiovascular risk factors in childhood and carotid artery intima-media thickness in adulthood: The Cardiovascular Risk in Young Finns Study
-
Raitakari, O. T. et al. Cardiovascular risk factors in childhood and carotid artery intima-media thickness in adulthood: the Cardiovascular Risk in Young Finns Study. JAMA 290, 2277-83 (2003).
-
(2003)
JAMA
, vol.290
, pp. 2277-2283
-
-
Raitakari, O.T.1
-
31
-
-
0029791893
-
Risk factors related to carotid intima-media thickness and plaque in children with familial hypercholesterolemia and control subjects
-
Tonstad, S. et al. Risk factors related to carotid intima-media thickness and plaque in children with familial hypercholesterolemia and control subjects. Arterioscler. Thromb. Vasc. Biol. 16, 984-91 (1996).
-
(1996)
Arterioscler. Thromb. Vasc. Biol.
, vol.16
, pp. 984-991
-
-
Tonstad, S.1
-
32
-
-
85021720400
-
Mass Spectrometry-Based Serum Proteomics for Biomarker Discovery and Validation
-
Bhosale, S. D., Moulder, R., Kouvonen, P., Lahesmaa, R. & Goodlett, D. R. Mass Spectrometry-Based Serum Proteomics for Biomarker Discovery and Validation. Methods Mol. Biol. 1619, 451-466 (2017).
-
(2017)
Methods Mol. Biol.
, vol.1619
, pp. 451-466
-
-
Bhosale, S.D.1
Moulder, R.2
Kouvonen, P.3
Lahesmaa, R.4
Goodlett, D.R.5
-
33
-
-
33846133955
-
Computational prediction of proteotypic peptides for quantitative proteomics
-
Mallick, P. et al. Computational prediction of proteotypic peptides for quantitative proteomics. Nat. Biotechnol. 25, 125-131 (2007).
-
(2007)
Nat. Biotechnol.
, vol.25
, pp. 125-131
-
-
Mallick, P.1
-
34
-
-
79953701087
-
Andromeda: A Peptide Search Engine Integrated into the MaxQuant Environment
-
Cox, J. et al. Andromeda: A Peptide Search Engine Integrated into the MaxQuant Environment. J. Proteome Res. 10, 1794-1805 (2011).
-
(2011)
J. Proteome Res.
, vol.10
, pp. 1794-1805
-
-
Cox, J.1
-
35
-
-
57449099865
-
MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification
-
Cox, J. & Mann, M. MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification. Nat Biotech 26, 1367-1372 (2008).
-
(2008)
Nat Biotech
, vol.26
, pp. 1367-1372
-
-
Cox, J.1
Mann, M.2
-
36
-
-
84907197082
-
Accurate proteome-wide label-free quantification by delayed normalization and maximal peptide ratio extraction, termed MaxLFQ
-
Cox, J., Hein, M. Y., Luber, Ca & Paron, I. Accurate proteome-wide label-free quantification by delayed normalization and maximal peptide ratio extraction, termed MaxLFQ. Mol. Cell.. 13, 2513-2526 (2014).
-
(2014)
Mol. Cell..
, vol.13
, pp. 2513-2526
-
-
Cox, J.1
Hein, M.Y.2
Luber, Ca.3
Paron, I.4
-
37
-
-
84976274986
-
The Perseus computational platform for comprehensive analysis of (prote)omics data
-
Tyanova, S. et al. The Perseus computational platform for comprehensive analysis of (prote)omics data. Nat. Methods, https://doi.org/10.1038/nmeth.3901 (2016).
-
(2016)
Nat. Methods
-
-
Tyanova, S.1
-
38
-
-
27644555055
-
Interpretation of Shotgun Proteomic Data: The Protein Inference Problem
-
Nesvizhskii, A. I. & Aebersold, R. Interpretation of Shotgun Proteomic Data: The Protein Inference Problem. Mol Cell Proteomics 4, 1419-1440 (2005).
-
(2005)
Mol Cell Proteomics
, vol.4
, pp. 1419-1440
-
-
Nesvizhskii, A.I.1
Aebersold, R.2
-
39
-
-
84946063277
-
Machine Learning Based Classification of Diffuse Large B-cell Lymphoma Patients by their Protein Expression Profiles
-
Deeb, S. J. et al. Machine Learning Based Classification of Diffuse Large B-cell Lymphoma Patients by their Protein Expression Profiles. Mol. Cell. Proteomics 2947-2960, https://doi.org/10.1074/mcp.M115.050245 (2015).
-
(2015)
Mol. Cell. Proteomics
, pp. 2947-2960
-
-
Deeb, S.J.1
-
40
-
-
84863304598
-
-
R Development Core Team R R Foundation for Statistical Computing 1
-
R Development Core Team, R. R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing 1 (2011).
-
(2011)
R: A Language and Environment for Statistical Computing
-
-
-
41
-
-
77951965920
-
Skyline: An open source document editor for creating and analyzing targeted proteomics experiments
-
MacLean, B. et al. Skyline: an open source document editor for creating and analyzing targeted proteomics experiments. Bioinformatics 26, 966-968 (2010).
-
(2010)
Bioinformatics
, vol.26
, pp. 966-968
-
-
MacLean, B.1
-
42
-
-
49249093918
-
Reproducibility-optimized test statistic for ranking genes in microarray studies
-
Elo, L. L., Filén, S., Lahesmaa, R. & Aittokallio, T. Reproducibility-optimized test statistic for ranking genes in microarray studies. In IEEE/ACM Transactions on Computational Biology and Bioinformatics 5, 423-431 (2008).
-
(2008)
IEEE/ACM Transactions on Computational Biology and Bioinformatics
, vol.5
, pp. 423-431
-
-
Elo, L.L.1
Filén, S.2
Lahesmaa, R.3
Aittokallio, T.4
-
43
-
-
85020112152
-
ROTS: An R package for reproducibility-optimized statistical testing
-
Suomi, T., Seyednasrollah, F., Jaakkola, M. K., Faux, T. & Elo, L. L. ROTS: An R package for reproducibility-optimized statistical testing. Plos Comput. Biol. 13 (2017).
-
(2017)
Plos Comput. Biol.
, vol.13
-
-
Suomi, T.1
Seyednasrollah, F.2
Jaakkola, M.K.3
Faux, T.4
Elo, L.L.5
-
45
-
-
77950537175
-
Regularization Paths for Generalized Linear Models via Coordinate Descent
-
Friedman, J., Hastie, T. & Tibshirani, R. Regularization Paths for Generalized Linear Models via Coordinate Descent. J. Stat. Softw. 33 (2010).
-
(2010)
J. Stat. Softw.
, vol.33
-
-
Friedman, J.1
Hastie, T.2
Tibshirani, R.3
-
46
-
-
0023710206
-
Comparing the Areas under Two or More Correlated Receiver Operating Characteristic Curves: A Nonparametric Approach
-
DeLong, E. R., DeLong, D. M. & Clarke-Pearson, D. L. Comparing the Areas under Two or More Correlated Receiver Operating Characteristic Curves: A Nonparametric Approach. Biometrics 44, 837 (1988).
-
(1988)
Biometrics
, vol.44
, pp. 837
-
-
DeLong, E.R.1
DeLong, D.M.2
Clarke-Pearson, D.L.3
-
47
-
-
79952709519
-
PROC: An open-source package for R and S+ to analyze and compare ROC curves
-
Robin, X. et al. pROC: an open-source package for R and S+ to analyze and compare ROC curves. BMC Bioinformatics 12, 77 (2011).
-
(2011)
BMC Bioinformatics
, vol.12
, pp. 77
-
-
Robin, X.1
-
48
-
-
84907033616
-
MSstats: An R package for statistical analysis of quantitative mass spectrometry-based proteomic experiments
-
Choi, M. et al. MSstats: an R package for statistical analysis of quantitative mass spectrometry-based proteomic experiments. Bioinformatics, https://doi.org/10.1093/bioinformatics/btu305 (2014).
-
(2014)
Bioinformatics
-
-
Choi, M.1
-
49
-
-
84976871411
-
2016 update of the PRIDE database and its related tools
-
Vizcaíno, J. A. et al. 2016 update of the PRIDE database and its related tools. Nucleic Acids Res. 44, D447-D456 (2016).
-
(2016)
Nucleic Acids Res.
, vol.44
, pp. D447-D456
-
-
Vizcaíno, J.A.1
-
50
-
-
84860856503
-
PASSEL: The PeptideAtlas SRMexperiment library
-
Farrah, T. et al. PASSEL: The PeptideAtlas SRMexperiment library. Proteomics 12, 1170-1175 (2012).
-
(2012)
Proteomics
, vol.12
, pp. 1170-1175
-
-
Farrah, T.1
|