-
1
-
-
79957954506
-
Automated reconstruction of neuronal morphology: an overview
-
Donohue DE, Ascoli GA (2011) Automated reconstruction of neuronal morphology: an overview. Brain Res Rev 67:94–102
-
(2011)
Brain Res Rev
, vol.67
, pp. 94-102
-
-
Donohue, D.E.1
Ascoli, G.A.2
-
2
-
-
84875547168
-
Neuronal morphology goes digital: a research hub for cellular and system neuroscience
-
Parekh R, Ascoli GA (2013) Neuronal morphology goes digital: a research hub for cellular and system neuroscience. Neuron 77:1017–1038
-
(2013)
Neuron
, vol.77
, pp. 1017-1038
-
-
Parekh, R.1
Ascoli, G.A.2
-
3
-
-
77954289614
-
Neuron tracing in perspective
-
Meijering E (2010) Neuron tracing in perspective. Cytometry A 77:693–704
-
(2010)
Cytometry A
, vol.77
, pp. 693-704
-
-
Meijering, E.1
-
4
-
-
84878276723
-
APP2: automatic tracing of 3D neuron morphology based on hierarchical pruning of a gray-weighted image distance-tree
-
Xiao H, Peng H (2013) APP2: automatic tracing of 3D neuron morphology based on hierarchical pruning of a gray-weighted image distance-tree. Bioinformatics 29:1448–1454
-
(2013)
Bioinformatics
, vol.29
, pp. 1448-1454
-
-
Xiao, H.1
Peng, H.2
-
5
-
-
79959470488
-
Automatic 3D neuron tracing using all-path pruning
-
Peng H, Long F, Myers G (2011) Automatic 3D neuron tracing using all-path pruning. Bioinformatics 27:i239–i247
-
(2011)
Bioinformatics
, vol.27
, pp. i239-i247
-
-
Peng, H.1
Long, F.2
Myers, G.3
-
6
-
-
84866912879
-
High-throughput computer method for 3D neuronal structure reconstruction from the image stack of the Drosophila brain and its applications
-
Lee P-C, Chuang C-C, Chiang A-S, Ching Y-T (2012) High-throughput computer method for 3D neuronal structure reconstruction from the image stack of the Drosophila brain and its applications. PLoS Comput Biol 8:e1002658
-
(2012)
PLoS Comput Biol
, vol.8
, pp. e1002658
-
-
Lee, P.-C.1
Chuang, C.-C.2
Chiang, A.-S.3
Ching, Y.-T.4
-
8
-
-
79958104510
-
A broadly applicable 3-D neuron tracing method based on open-curve snake
-
Wang Y, Narayanaswamy A, Tsai C-L, Roysam B (2011) A broadly applicable 3-D neuron tracing method based on open-curve snake. Neuroinformatics 9:193–217
-
(2011)
Neuroinformatics
, vol.9
, pp. 193-217
-
-
Wang, Y.1
Narayanaswamy, A.2
Tsai, C.-L.3
Roysam, B.4
-
9
-
-
77954196544
-
Automatic reconstruction of 3D neuron structures using a graph-augmented deformable model
-
Peng H, Ruan Z, Atasoy D, Sternson S (2010) Automatic reconstruction of 3D neuron structures using a graph-augmented deformable model. Bioinformatics 26:i38–i46
-
(2010)
Bioinformatics
, vol.26
, pp. i38-i46
-
-
Peng, H.1
Ruan, Z.2
Atasoy, D.3
Sternson, S.4
-
11
-
-
84937422559
-
BigNeuron: large-Scale 3D neuron reconstruction from optical microscopy images
-
Peng H, Hawrylycz M, Roskams J, Hill S, Spruston N, Meijering E, Ascoli GA (2015) BigNeuron: large-Scale 3D neuron reconstruction from optical microscopy images. Neuron. doi:10.1016/j.neuron.2015.06.036
-
(2015)
Neuron
-
-
Peng, H.1
Hawrylycz, M.2
Roskams, J.3
Hill, S.4
Spruston, N.5
Meijering, E.6
Ascoli, G.A.7
-
12
-
-
84901255614
-
Active learning of neuron morphology for accurate automated tracing of neurites
-
Gala R, Chapeton J, Jitesh J, Bhavsar C, Stepanyants A (2014) Active learning of neuron morphology for accurate automated tracing of neurites. Front Neuroanat 8:37
-
(2014)
Front Neuroanat
, vol.8
, pp. 37
-
-
Gala, R.1
Chapeton, J.2
Jitesh, J.3
Bhavsar, C.4
Stepanyants, A.5
-
13
-
-
34047120829
-
Automatic recognition and annotation of gene expression patterns of fly embryos
-
Zhou J, Peng H (2007) Automatic recognition and annotation of gene expression patterns of fly embryos. Bioinformatics 23:589–596
-
(2007)
Bioinformatics
, vol.23
, pp. 589-596
-
-
Zhou, J.1
Peng, H.2
-
14
-
-
24344458137
-
Feature selection based on mutual information: criteria of max-dependency, max-relevance, and min-redundancy
-
Peng H, Long F, Ding C (2005) Feature selection based on mutual information: criteria of max-dependency, max-relevance, and min-redundancy. IEEE Trans Pattern Anal Mach Intell 27:1226–1238
-
(2005)
IEEE Trans Pattern Anal Mach Intell
, vol.27
, pp. 1226-1238
-
-
Peng, H.1
Long, F.2
Ding, C.3
-
15
-
-
0024700097
-
A theory for multiresolution signal decomposition: the wavelet representation
-
Mallat SG (1989) A theory for multiresolution signal decomposition: the wavelet representation. IEEE Trans Pattern Anal Mach Intell 11:674–693
-
(1989)
IEEE Trans Pattern Anal Mach Intell
, vol.11
, pp. 674-693
-
-
Mallat, S.G.1
-
16
-
-
84941604352
-
Volume data and wavelet transforms
-
Muraki S (1993) Volume data and wavelet transforms. IEEE Comput Graph Appl 13:50–56
-
(1993)
IEEE Comput Graph Appl
, vol.13
, pp. 50-56
-
-
Muraki, S.1
-
17
-
-
17644384367
-
Minimum redundancy feature selection from microarray gene expression data
-
Ding C, Peng H (2005) Minimum redundancy feature selection from microarray gene expression data. J Bioinform Comput Biol 3:185–205
-
(2005)
J Bioinform Comput Biol
, vol.3
, pp. 185-205
-
-
Ding, C.1
Peng, H.2
-
19
-
-
77950679704
-
V3D enables real-time 3D visualization and quantitative analysis of large-scale biological image data sets
-
Peng H, Ruan Z, Long F, Simpson JH, Myers EW (2010) V3D enables real-time 3D visualization and quantitative analysis of large-scale biological image data sets. Nat Biotechnol 28:348–353
-
(2010)
Nat Biotechnol
, vol.28
, pp. 348-353
-
-
Peng, H.1
Ruan, Z.2
Long, F.3
Simpson, J.H.4
Myers, E.W.5
-
20
-
-
84891676743
-
Extensible visualization and analysis for multidimensional images using Vaa3D
-
Peng H, Bria A, Zhou Z, Iannello G, Long F (2014) Extensible visualization and analysis for multidimensional images using Vaa3D. Nat Protoc 9:193–208
-
(2014)
Nat Protoc
, vol.9
, pp. 193-208
-
-
Peng, H.1
Bria, A.2
Zhou, Z.3
Iannello, G.4
Long, F.5
-
21
-
-
84890953471
-
3D BrainCV: simultaneous visualization and analysis of cells and capillaries in a whole mouse brain with one-micron voxel resolution
-
Wu J, He Y, Yang Z, Guo C, Luo Q, Zhou W, Chen S, Li A, Xiong B, Jiang T, Gong H (2014) 3D BrainCV: simultaneous visualization and analysis of cells and capillaries in a whole mouse brain with one-micron voxel resolution. Neuroimage 87:199–208
-
(2014)
Neuroimage
, vol.87
, pp. 199-208
-
-
Wu, J.1
He, Y.2
Yang, Z.3
Guo, C.4
Luo, Q.5
Zhou, W.6
Chen, S.7
Li, A.8
Xiong, B.9
Jiang, T.10
Gong, H.11
-
22
-
-
79958130994
-
3-D image pre-processing algorithms for improved automated tracing of neuronal arbors
-
Narayanaswamy A, Wang Y, Roysam B (2011) 3-D image pre-processing algorithms for improved automated tracing of neuronal arbors. Neuroinformatics 9:219–231
-
(2011)
Neuroinformatics
, vol.9
, pp. 219-231
-
-
Narayanaswamy, A.1
Wang, Y.2
Roysam, B.3
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