Comparison of reduced metagenome and 16S rRNA gene sequencing for determination of genetic diversity and mother-child overlap of the gut associated microbiota

Journal of Microbiological Methods

Volumn 149, Issue , 2018, Pages 44-52

  Ravi, Anuradha ^a   Avershina, Ekaterina ^a   Angell, Inga Leena ^a   Ludvigsen, Jane ^a   Manohar, Prasanth ^b   Padmanaban, Sumathi ^c   Nachimuthu, Ramesh ^b   Snipen, Lars ^a   Rudi, Knut ^a  

^a NORWEGIAN UNIVERSITY OF LIFE SCIENCES   (Norway)

^b VIT UNIVERSITY   (India)

^c Nishanth Hospital   (India)

Author keywords

16S rRNA; Gut microbiota; Infant; RMS

Indexed keywords

BETA LACTAM ANTIBIOTIC; CHLORAMPHENICOL; FOSFOMYCIN; RNA 16S; ANTIINFECTIVE AGENT; BACTERIAL DNA;

ANTIBIOTIC RESISTANCE; ANTIBIOTIC SENSITIVITY; ARTICLE; BIFIDOBACTERIUM LONGUM; BIFIDOBACTERIUM LONGUM SUBSP. INFANTIS; CLOSTRIDIA; COHORT ANALYSIS; CONTROLLED STUDY; ENTEROCOCCUS FAECALIS; ESCHERICHIA COLI; GENE FUNCTION; GENE SEQUENCE; GENETIC VARIABILITY; GENOME; HUMAN; INFANT; INTESTINE FLORA; METAGENOME; MOTHER CHILD RELATION; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; TAXONOMY; UNINDEXED SEQUENCE; BACTERIAL GENE; BACTERIUM; CLASSIFICATION; DNA SEQUENCE; DRUG EFFECT; FEMALE; GENETIC VARIATION; GENETICS; ISOLATION AND PURIFICATION; METAGENOMICS; NEWBORN; PHYLOGENY; PROCEDURES;

ANTI-BACTERIAL AGENTS; BACTERIA; COHORT STUDIES; DNA, BACTERIAL; DRUG RESISTANCE, BACTERIAL; FEMALE; GASTROINTESTINAL MICROBIOME; GENES, BACTERIAL; GENETIC VARIATION; HUMANS; INFANT, NEWBORN; METAGENOME; METAGENOMICS; MOTHER-CHILD RELATIONS; PHYLOGENY; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA;

EID: 85046751879     PISSN: 01677012     EISSN: 18728359     Source Type: Journal    
DOI: 10.1016/j.mimet.2018.02.016     Document Type: Article

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