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Volumn 34, Issue 4, 2018, Pages 705-707

PESTO: Parameter EStimation TOolbox

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; BIOLOGY; PROCEDURES; SOFTWARE;

EID: 85042541620     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btx676     Document Type: Article
Times cited : (87)

References (12)
  • 1
    • 85009165961 scopus 로고    scopus 로고
    • Integration based profile likelihood calculation for PDE constrained parameter estimation problems
    • Boiger,R. et al. (2016) Integration based profile likelihood calculation for PDE constrained parameter estimation problems. Inverse Prob., 32, 125009.
    • (2016) Inverse Prob. , vol.32 , pp. 125009
    • Boiger, R.1
  • 2
    • 84900846604 scopus 로고    scopus 로고
    • MEIGO: An open-source software suite based on metaheuristics for global optimization in systems biology and bioinformatics
    • Egea,J. A. et al. (2014) MEIGO: an open-source software suite based on metaheuristics for global optimization in systems biology and bioinformatics. BMC Bioinf., 15, 136.
    • (2014) BMC Bioinf. , vol.15 , pp. 136
    • Egea, J.A.1
  • 3
    • 85011407731 scopus 로고    scopus 로고
    • Scalable parameter estimation for genome-scale biochemical reaction networks
    • Fröhlich,F. et al. (2017) Scalable parameter estimation for genome-scale biochemical reaction networks. PLoS Comput. Biol., 13, e1005331.
    • (2017) PLoS Comput. Biol. , vol.13 , pp. e1005331
    • Fröhlich, F.1
  • 4
    • 33750082644 scopus 로고    scopus 로고
    • DRAM: Efficient adaptive MCMC
    • Haario,H. et al. (2006) DRAM: efficient adaptive MCMC. Stat. Comp., 16, 339-354.
    • (2006) Stat. Comp. , vol.16 , pp. 339-354
    • Haario, H.1
  • 5
    • 84991510907 scopus 로고    scopus 로고
    • Analysis of CFSE time-series data using division-, age-and label-structured populationmodels
    • Hross,S. andHasenauer,J. (2016) Analysis of CFSE time-series data using division-, age-and label-structured populationmodels. Bioinformatics, 32, 2321-2329.
    • (2016) Bioinformatics , vol.32 , pp. 2321-2329
    • Hross, S.1    AndHasenauer, J.2
  • 6
    • 84888027235 scopus 로고    scopus 로고
    • High-dimensional Bayesian parameter estimation: Case study for a model of JAK2/STAT5 signaling
    • Hug,S. et al. (2013) High-dimensional Bayesian parameter estimation: Case study for a model of JAK2/STAT5 signaling. Math. Biosci., 246, 293-304.
    • (2013) Math. Biosci. , vol.246 , pp. 293-304
    • Hug, S.1
  • 7
    • 84930887923 scopus 로고    scopus 로고
    • State-dependent swap strategies and automatic reduction of number of temperatures in adaptive parallel tempering algorithm
    • Lacki,M. K. and Miasojedow,B. (2016) State-dependent swap strategies and automatic reduction of number of temperatures in adaptive parallel tempering algorithm. Stat. Comput, 26, 951-964.
    • (2016) Stat. Comput , vol.26 , pp. 951-964
    • Lacki, M.K.1    Miasojedow, B.2
  • 8
    • 84884755942 scopus 로고    scopus 로고
    • Lessons learned from quantitative dynamical modeling in systems biology
    • Raue,A. et al. (2013) Lessons learned from quantitative dynamical modeling in systems biology. PLoS One, 8, e74335.
    • (2013) PLoS One , vol.8 , pp. e74335
    • Raue, A.1
  • 9
    • 84857653832 scopus 로고    scopus 로고
    • Parallel hierarchical sampling: A general-purpose class of multiple-chains MCMC algorithms
    • Rigat,F. and Mira,A. (2012) Parallel hierarchical sampling: a general-purpose class of multiple-chains MCMC algorithms. Comp. Stat. Data Anal., 56, 1450-1467.
    • (2012) Comp. Stat. Data Anal. , vol.56 , pp. 1450-1467
    • Rigat, F.1    Mira, A.2
  • 10
    • 84860616978 scopus 로고    scopus 로고
    • CVODES: An ODE solver with sensitivity analysis capabilities
    • Serban,R. and Hindmarsh,A. C. (2005) CVODES: an ODE solver with sensitivity analysis capabilities. ACM Trans. Math. Softw., 31, 363-396.
    • (2005) ACM Trans. Math. Softw. , vol.31 , pp. 363-396
    • Serban, R.1    Hindmarsh, A.C.2
  • 11
    • 34548479280 scopus 로고    scopus 로고
    • A particle swarm pattern search method for bound constrained global optimization
    • Vaz,A. and Vicente,L. (2007) A particle swarm pattern search method for bound constrained global optimization. J. Global Optim., 39, 197-219.
    • (2007) J. Global Optim. , vol.39 , pp. 197-219
    • Vaz, A.1    Vicente, L.2
  • 12
    • 84964580738 scopus 로고    scopus 로고
    • Dynamic temperature selection for parallel tempering in markov chain monte carlo simulations
    • Vousden,W. et al. (2016) Dynamic temperature selection for parallel tempering in markov chain monte carlo simulations. Mon. Notices R. Astron. Soc., 455, 1919-1937.
    • (2016) Mon. Notices R. Astron. Soc. , vol.455 , pp. 1919-1937
    • Vousden, W.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.