SRNAnalyzer-A flexible and customizable small RNA sequencing data analysis pipeline

Nucleic Acids Research

Volumn 45, Issue 21, 2017, Pages 12140-12151

  Wu, Xiaogang ^a   Kim, Taek Kyun ^a   Baxter, David ^a   Scherler, Kelsey ^a   Gordon, Aaron ^a   Fong, Olivia ^b   Etheridge, Alton ^b   Galas, David J ^b   Wang, Kai ^a  

^a INSTITUTE FOR SYSTEMS BIOLOGY   (United States)

^b PACIFIC NORTHWEST RESEARCH INSTITUTE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

LONG UNTRANSLATED RNA; MICRORNA; MICRORNA 1 3P; MICRORNA 122 5P; MICRORNA 1224 5P; MICRORNA 124 3P; MICRORNA 129 1 3P; MICRORNA 129 2 3P; MICRORNA 133A 3P; MICRORNA 133A 5P; MICRORNA 133B; MICRORNA 135A 5P; MICRORNA 135B 5P; MICRORNA 143 5P; MICRORNA 145 3P; MICRORNA 147B; MICRORNA 183 5P; MICRORNA 194 1 3P; MICRORNA 215 3P; MICRORNA 31 3P; MICRORNA 31 5P; MICRORNA 375; MICRORNA 490 3P; RIBOSOME RNA; TRANSFER RNA; UNCLASSIFIED DRUG; BACTERIAL RNA; SMALL UNTRANSLATED RNA;

ACTINOBACILLUS; ARTICLE; BACTERIAL OUTER MEMBRANE; BACTERIUM CULTURE; BURKHOLDERIA; CHLAMYDIA; CONTROLLED STUDY; CORYNEBACTERIUM; CRONOBACTER; ESCHERICHIA; GENE MAPPING; GENETIC CONSERVATION; HUMAN; HUMAN TISSUE; KLEBSIELLA; MICROARRAY ANALYSIS; MYCOBACTERIUM; PRIORITY JOURNAL; PSEUDOMONAS; REAL TIME POLYMERASE CHAIN REACTION; RNA ANALYSIS; RNA SEQUENCE; SALMONELLA; SEQUENCE ALIGNMENT; SHIGELLA; SINGLE NUCLEOTIDE POLYMORPHISM; STREPTOCOCCUS; TAXONOMY; BLOOD; CHEMISTRY; DNA MICROARRAY; ESCHERICHIA COLI; EVALUATION STUDY; GENE EXPRESSION PROFILING; GENETICS; HIGH THROUGHPUT SEQUENCING; METABOLISM; PROCEDURES; SEQUENCE ANALYSIS; SOFTWARE;

ESCHERICHIA COLI; GENE EXPRESSION PROFILING; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; HUMANS; MICRORNAS; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; REAL-TIME POLYMERASE CHAIN REACTION; RNA, BACTERIAL; RNA, SMALL UNTRANSLATED; SEQUENCE ANALYSIS, RNA; SOFTWARE;

EID: 85039076949     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkx999     Document Type: Article

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