-
1
-
-
74549154467
-
Scopolin-hydrolyzing β-glucosidases in roots of Arabidopsis
-
Ahn, Y.O., Shimizu, B.-I., Sakata, K., Gantulga, D., Zhou, Z., Bevan, D.R. and Esen, A. (2010) Scopolin-hydrolyzing β-glucosidases in roots of Arabidopsis. Plant Cell Physiol. 51, 132–143.
-
(2010)
Plant Cell Physiol.
, vol.51
, pp. 132-143
-
-
Ahn, Y.O.1
Shimizu, B.-I.2
Sakata, K.3
Gantulga, D.4
Zhou, Z.5
Bevan, D.R.6
Esen, A.7
-
2
-
-
84959249786
-
Discovery of a bacterial glycoside hydrolase family 3 (GH3) β-glucosidase with myrosinase activity from a Citrobacter strain isolated from soil
-
Albaser, A., Kazana, E., Bennett, M., Cebeci, F., Luang-In, V., Spanu, P.D. and Rossiter, J.T. (2016) Discovery of a bacterial glycoside hydrolase family 3 (GH3) β-glucosidase with myrosinase activity from a Citrobacter strain isolated from soil. J. Agric. Food Chem. 64, 20–27.
-
(2016)
J. Agric. Food Chem.
, vol.64
, pp. 20-27
-
-
Albaser, A.1
Kazana, E.2
Bennett, M.3
Cebeci, F.4
Luang-In, V.5
Spanu, P.D.6
Rossiter, J.T.7
-
3
-
-
33646232241
-
Arabidopsis myrosinases TGG1 and TGG2 have redundant function in glucosinolate breakdown and insect defense
-
Barth, C. and Jander, G. (2006) Arabidopsis myrosinases TGG1 and TGG2 have redundant function in glucosinolate breakdown and insect defense. Plant J. 46, 549–562.
-
(2006)
Plant J.
, vol.46
, pp. 549-562
-
-
Barth, C.1
Jander, G.2
-
4
-
-
65649154085
-
Plant-microbe interactions: chemical diversity in plant defense
-
Bednarek, P. and Osbourn, A. (2009) Plant-microbe interactions: chemical diversity in plant defense. Science, 324, 746–748.
-
(2009)
Science
, vol.324
, pp. 746-748
-
-
Bednarek, P.1
Osbourn, A.2
-
5
-
-
18044371000
-
Structural complexity, differential response to infection, and tissue specificity of indolic and phenylpropanoid secondary metabolism in Arabidopsis roots
-
Bednarek, P., Schneider, B., Svatos, A., Oldham, N.J. and Hahlbrock, K. (2005) Structural complexity, differential response to infection, and tissue specificity of indolic and phenylpropanoid secondary metabolism in Arabidopsis roots. Plant Physiol. 138, 1058–1070.
-
(2005)
Plant Physiol.
, vol.138
, pp. 1058-1070
-
-
Bednarek, P.1
Schneider, B.2
Svatos, A.3
Oldham, N.J.4
Hahlbrock, K.5
-
6
-
-
58149215723
-
A glucosinolate metabolism pathway in living plant cells mediates broad-spectrum antifungal defense
-
Bednarek, P., Pislewska-Bednarek, M., Svatos, A. et al. (2009) A glucosinolate metabolism pathway in living plant cells mediates broad-spectrum antifungal defense. Science, 323, 101–106.
-
(2009)
Science
, vol.323
, pp. 101-106
-
-
Bednarek, P.1
Pislewska-Bednarek, M.2
Svatos, A.3
-
7
-
-
80054837618
-
Conservation and clade-specific diversification of pathogen-inducible tryptophan and indole glucosinolate metabolism in Arabidopsis thaliana relatives
-
Bednarek, P., Piślewska-Bednarek, M., Ver Loren van Themaat, E., Maddula, R.K., Svatoš, A. and Schulze-Lefert, P. (2011) Conservation and clade-specific diversification of pathogen-inducible tryptophan and indole glucosinolate metabolism in Arabidopsis thaliana relatives. New Phytol. 192, 713–726.
-
(2011)
New Phytol.
, vol.192
, pp. 713-726
-
-
Bednarek, P.1
Piślewska-Bednarek, M.2
Ver Loren van Themaat, E.3
Maddula, R.K.4
Svatoš, A.5
Schulze-Lefert, P.6
-
8
-
-
33750063596
-
Dilated cisternae in Capparales – an attempt towards the characterization of a specific endoplasmic reticulum
-
Behnke, H.D. and Eschlbeck, G. (1978) Dilated cisternae in Capparales – an attempt towards the characterization of a specific endoplasmic reticulum. Protoplasma, 97, 351–363.
-
(1978)
Protoplasma
, vol.97
, pp. 351-363
-
-
Behnke, H.D.1
Eschlbeck, G.2
-
9
-
-
84901036364
-
Phyllotreta striolata flea beetles use host plant defense compounds to create their own glucosinolate-myrosinase system
-
Beran, F., Pauchet, Y., Kunert, G. et al. (2014) Phyllotreta striolata flea beetles use host plant defense compounds to create their own glucosinolate-myrosinase system. Proc. Natl Acad. Sci. USA, 111, 7349–7354.
-
(2014)
Proc. Natl Acad. Sci. USA
, vol.111
, pp. 7349-7354
-
-
Beran, F.1
Pauchet, Y.2
Kunert, G.3
-
10
-
-
0013819098
-
Polyribosomes and cisternal accumulations in root cells of radish
-
Bonnett, H.T. and Newcomb, E.H. (1965) Polyribosomes and cisternal accumulations in root cells of radish. J. Cell Biol. 27, 423–432.
-
(1965)
J. Cell Biol.
, vol.27
, pp. 423-432
-
-
Bonnett, H.T.1
Newcomb, E.H.2
-
11
-
-
53149136624
-
Spatial organization of the glucosinolate-myrosinase system in brassica specialist aphids is similar to that of the host plant
-
Bridges, M., Jones, A.M., Bones, A.M., Hodgson, C., Cole, R., Bartlet, E., Wallsgrove, R., Karapapa, V.K., Watts, N. and Rossiter, J.T. (2002) Spatial organization of the glucosinolate-myrosinase system in brassica specialist aphids is similar to that of the host plant. Proc. Biol. Sci. 269, 187–191.
-
(2002)
Proc. Biol. Sci.
, vol.269
, pp. 187-191
-
-
Bridges, M.1
Jones, A.M.2
Bones, A.M.3
Hodgson, C.4
Cole, R.5
Bartlet, E.6
Wallsgrove, R.7
Karapapa, V.K.8
Watts, N.9
Rossiter, J.T.10
-
12
-
-
0037311116
-
Variation of glucosinolate accumulation among different organs and developmental stages of Arabidopsis thaliana
-
Brown, P.D., Tokuhisa, J.G., Reichelt, M. and Gershenzon, J. (2003) Variation of glucosinolate accumulation among different organs and developmental stages of Arabidopsis thaliana. Phytochemistry, 62, 471–481.
-
(2003)
Phytochemistry
, vol.62
, pp. 471-481
-
-
Brown, P.D.1
Tokuhisa, J.G.2
Reichelt, M.3
Gershenzon, J.4
-
13
-
-
0031570331
-
The crystal structures of Sinapis alba myrosinase and a covalent glycosyl enzyme intermediate provide insights into the substrate recognition and active-site machinery of an S-glycosidase
-
Burmeister, W.P., Cottaz, S., Driguez, H., Iori, R., Palmieri, S. and Henrissat, B. (1997) The crystal structures of Sinapis alba myrosinase and a covalent glycosyl enzyme intermediate provide insights into the substrate recognition and active-site machinery of an S-glycosidase. Structure, 5, 663–676.
-
(1997)
Structure
, vol.5
, pp. 663-676
-
-
Burmeister, W.P.1
Cottaz, S.2
Driguez, H.3
Iori, R.4
Palmieri, S.5
Henrissat, B.6
-
14
-
-
38349144280
-
ESP and ESM1 mediate indol-3-acetonitrile production from indol-3-ylmethyl glucosinolate in Arabidopsis
-
Burow, M., Zhang, Z.Y., Ober, J.A., Lambrix, V.M., Wittstock, U., Gershenzon, J. and Kliebenstein, D.J. (2008) ESP and ESM1 mediate indol-3-acetonitrile production from indol-3-ylmethyl glucosinolate in Arabidopsis. Phytochemistry, 69, 663–671.
-
(2008)
Phytochemistry
, vol.69
, pp. 663-671
-
-
Burow, M.1
Zhang, Z.Y.2
Ober, J.A.3
Lambrix, V.M.4
Wittstock, U.5
Gershenzon, J.6
Kliebenstein, D.J.7
-
15
-
-
58449089304
-
The genetic basis of constitutive and herbivore-induced ESP-independent nitrile formation in Arabidopsis
-
Burow, M., Losansky, A., Muller, R., Plock, A., Kliebenstein, D.J. and Wittstock, U. (2009) The genetic basis of constitutive and herbivore-induced ESP-independent nitrile formation in Arabidopsis. Plant Physiol. 149, 561–574.
-
(2009)
Plant Physiol.
, vol.149
, pp. 561-574
-
-
Burow, M.1
Losansky, A.2
Muller, R.3
Plock, A.4
Kliebenstein, D.J.5
Wittstock, U.6
-
16
-
-
84881103415
-
The effects of glucosinolates and their breakdown products on necrotrophic fungi
-
Buxdorf, K., Yaffe, H., Barda, O. and Levy, M. (2013) The effects of glucosinolates and their breakdown products on necrotrophic fungi. PLoS ONE, 8, e70771.
-
(2013)
PLoS ONE
, vol.8
-
-
Buxdorf, K.1
Yaffe, H.2
Barda, O.3
Levy, M.4
-
17
-
-
80052338881
-
Combining genome-wide association mapping and transcriptional networks to identify novel genes controlling glucosinolates in Arabidopsis thaliana
-
Chan, E.K., Rowe, H.C., Corwin, J.A., Joseph, B. and Kliebenstein, D.J. (2011) Combining genome-wide association mapping and transcriptional networks to identify novel genes controlling glucosinolates in Arabidopsis thaliana. PLoS Biol. 9, e1001125.
-
(2011)
PLoS Biol.
, vol.9
-
-
Chan, E.K.1
Rowe, H.C.2
Corwin, J.A.3
Joseph, B.4
Kliebenstein, D.J.5
-
18
-
-
0036016440
-
Downregulation of a pathogen-responsive tobacco UDP-Glc:phenylpropanoid glucosyltransferase reduces scopoletin glucoside accumulation, enhances oxidative stress, and weakens virus resistance
-
Chong, J., Baltz, R., Schmitt, C., Beffa, R., Fritig, B. and Saindrenan, P. (2002) Downregulation of a pathogen-responsive tobacco UDP-Glc:phenylpropanoid glucosyltransferase reduces scopoletin glucoside accumulation, enhances oxidative stress, and weakens virus resistance. Plant Cell, 14, 1093–1107.
-
(2002)
Plant Cell
, vol.14
, pp. 1093-1107
-
-
Chong, J.1
Baltz, R.2
Schmitt, C.3
Beffa, R.4
Fritig, B.5
Saindrenan, P.6
-
19
-
-
0034920021
-
Biosynthesis of scopoletin in Hevea brasiliensis leaves inoculated with Phytophthora palmivora
-
Churngchow, N. and Rattarasarn, M. (2001) Biosynthesis of scopoletin in Hevea brasiliensis leaves inoculated with Phytophthora palmivora. J. Plant Physiol. 158, 875–882.
-
(2001)
J. Plant Physiol.
, vol.158
, pp. 875-882
-
-
Churngchow, N.1
Rattarasarn, M.2
-
20
-
-
58149242371
-
Glucosinolate metabolites required for an Arabidopsis innate immune response
-
Clay, N.K., Adio, A.M., Denoux, C., Jander, G. and Ausubel, F.M. (2009) Glucosinolate metabolites required for an Arabidopsis innate immune response. Science, 323, 95–101.
-
(2009)
Science
, vol.323
, pp. 95-101
-
-
Clay, N.K.1
Adio, A.M.2
Denoux, C.3
Jander, G.4
Ausubel, F.M.5
-
21
-
-
72649096546
-
Molecular phylogenetics, temporal diversification, and principles of evolution in the mustard family (Brassicaceae)
-
Couvreur, T.L.P., Franzke, A., Al-Shehbaz, I.A., Bakker, F.T., Koch, M.A. and Mummenhoff, K. (2010) Molecular phylogenetics, temporal diversification, and principles of evolution in the mustard family (Brassicaceae). Mol. Biol. Evol. 27, 55–71.
-
(2010)
Mol. Biol. Evol.
, vol.27
, pp. 55-71
-
-
Couvreur, T.L.P.1
Franzke, A.2
Al-Shehbaz, I.A.3
Bakker, F.T.4
Koch, M.A.5
Mummenhoff, K.6
-
22
-
-
0016297472
-
Uncommon paracrystalline structures formed in the endoplasmic reticulum of the integumentary cells of Diplotaxis erucoides ovules
-
Cresti, M., Pacini, E. and Simoncioli, C. (1974) Uncommon paracrystalline structures formed in the endoplasmic reticulum of the integumentary cells of Diplotaxis erucoides ovules. J. Ultrastruct. Res. 49, 219–223.
-
(1974)
J. Ultrastruct. Res.
, vol.49
, pp. 219-223
-
-
Cresti, M.1
Pacini, E.2
Simoncioli, C.3
-
23
-
-
33744503909
-
Inducible virus-mediated expression of a foreign protein in suspension-cultured plant cells
-
Dohi, K., Nishikiori, M., Tamai, A., Ishikawa, M., Meshi, T. and Mori, M. (2006) Inducible virus-mediated expression of a foreign protein in suspension-cultured plant cells. Arch. Virol. 151, 1075–1084.
-
(2006)
Arch. Virol.
, vol.151
, pp. 1075-1084
-
-
Dohi, K.1
Nishikiori, M.2
Tamai, A.3
Ishikawa, M.4
Meshi, T.5
Mori, M.6
-
24
-
-
50849086727
-
Insertion in the coding region of the movement protein improves stability of the plasmid encoding a tomato mosaic virus-based expression vector
-
Dohi, K., Tamai, A. and Mori, M. (2008) Insertion in the coding region of the movement protein improves stability of the plasmid encoding a tomato mosaic virus-based expression vector. Arch. Virol. 153, 1667–1675.
-
(2008)
Arch. Virol.
, vol.153
, pp. 1667-1675
-
-
Dohi, K.1
Tamai, A.2
Mori, M.3
-
25
-
-
33846125299
-
Ultrastructural cytology of callus cultures of Streptanthus tortuosus as affected by temperature
-
Endress, A.G. and Sjolund, R.D. (1976) Ultrastructural cytology of callus cultures of Streptanthus tortuosus as affected by temperature. Am. J. Bot. 63, 1213–1224.
-
(1976)
Am. J. Bot.
, vol.63
, pp. 1213-1224
-
-
Endress, A.G.1
Sjolund, R.D.2
-
26
-
-
84888307631
-
Involvement of the ABCG37 transporter in secretion of scopoletin and derivatives by Arabidopsis roots in response to iron deficiency
-
Fourcroy, P., Siso-Terraza, P., Sudre, D., Saviron, M., Reyt, G., Gaymard, F., Abadia, A., Abadia, J., Alvarez-Fernandez, A. and Briat, J.F. (2014) Involvement of the ABCG37 transporter in secretion of scopoletin and derivatives by Arabidopsis roots in response to iron deficiency. New Phytol. 201, 155–167.
-
(2014)
New Phytol.
, vol.201
, pp. 155-167
-
-
Fourcroy, P.1
Siso-Terraza, P.2
Sudre, D.3
Saviron, M.4
Reyt, G.5
Gaymard, F.6
Abadia, A.7
Abadia, J.8
Alvarez-Fernandez, A.9
Briat, J.F.10
-
27
-
-
84900483147
-
MYB34, MYB51, and MYB122 distinctly regulate indolic glucosinolate biosynthesis in Arabidopsis thaliana
-
Frerigmann, H. and Gigolashvili, T. (2014) MYB34, MYB51, and MYB122 distinctly regulate indolic glucosinolate biosynthesis in Arabidopsis thaliana. Mol. Plant, 7, 814–828.
-
(2014)
Mol. Plant
, vol.7
, pp. 814-828
-
-
Frerigmann, H.1
Gigolashvili, T.2
-
28
-
-
84907045650
-
bHLH05 is an interaction partner of MYB51 and a novel regulator of glucosinolate biosynthesis in Arabidopsis
-
Frerigmann, H., Berger, B. and Gigolashvili, T. (2014) bHLH05 is an interaction partner of MYB51 and a novel regulator of glucosinolate biosynthesis in Arabidopsis. Plant Physiol. 166, 349–369.
-
(2014)
Plant Physiol.
, vol.166
, pp. 349-369
-
-
Frerigmann, H.1
Berger, B.2
Gigolashvili, T.3
-
29
-
-
84964689601
-
Regulation of pathogen-triggered tryptophan metabolism in Arabidopsis thaliana by MYB transcription factors and indole glucosinolate conversion products
-
Frerigmann, H., Pislewska-Bednarek, M., Sanchez-Vallet, A., Molina, A., Glawischnig, E., Gigolashvili, T. and Bednarek, P. (2016) Regulation of pathogen-triggered tryptophan metabolism in Arabidopsis thaliana by MYB transcription factors and indole glucosinolate conversion products. Mol. Plant, 9, 682–695.
-
(2016)
Mol. Plant
, vol.9
, pp. 682-695
-
-
Frerigmann, H.1
Pislewska-Bednarek, M.2
Sanchez-Vallet, A.3
Molina, A.4
Glawischnig, E.5
Gigolashvili, T.6
Bednarek, P.7
-
30
-
-
84973293682
-
Arabidopsis myrosinase genes AtTGG4 and AtTGG5 Are root-tip specific and contribute to auxin biosynthesis and root-growth regulation
-
Fu, L., Wang, M., Han, B., Tan, D., Sun, X. and Zhang, J. (2016) Arabidopsis myrosinase genes AtTGG4 and AtTGG5 Are root-tip specific and contribute to auxin biosynthesis and root-growth regulation. Int. J. Mol. Sci. 17, 892.
-
(2016)
Int. J. Mol. Sci.
, vol.17
, pp. 892
-
-
Fu, L.1
Wang, M.2
Han, B.3
Tan, D.4
Sun, X.5
Zhang, J.6
-
31
-
-
84957796964
-
Immobilized subpopulations of leaf epidermal mitochondria mediate PEN2-dependent pathogen entry control in Arabidopsis
-
Fuchs, R., Kopischke, M., Klapprodt, C., Hause, G., Meyer, A.J., Schwarzlander, M., Fricker, M.D. and Lipka, V. (2016) Immobilized subpopulations of leaf epidermal mitochondria mediate PEN2-dependent pathogen entry control in Arabidopsis. Plant Cell. 28, 130–145.
-
(2016)
Plant Cell.
, vol.28
, pp. 130-145
-
-
Fuchs, R.1
Kopischke, M.2
Klapprodt, C.3
Hause, G.4
Meyer, A.J.5
Schwarzlander, M.6
Fricker, M.D.7
Lipka, V.8
-
32
-
-
34250268218
-
Dilated ER in callus cells and in cells from Armoracia plants cultivated in vitro
-
Gailhofer, M., Thaler, I. and Rücker, W. (1979) Dilated ER in callus cells and in cells from Armoracia plants cultivated in vitro. Protoplasma, 98, 263–274.
-
(1979)
Protoplasma
, vol.98
, pp. 263-274
-
-
Gailhofer, M.1
Thaler, I.2
Rücker, W.3
-
33
-
-
34948906954
-
MaxAlign: maximizing usable data in an alignment
-
Gouveia-Oliveira, R., Sackett, P.W. and Pedersen, A.G. (2007) MaxAlign: maximizing usable data in an alignment. BMC Bioinformatics, 8, 312, doi: 10.1186/1471-2105-8-312.
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 312
-
-
Gouveia-Oliveira, R.1
Sackett, P.W.2
Pedersen, A.G.3
-
34
-
-
0029906514
-
The production of coumarin phytoalexins in different plant organs of sunflower (Helianthus annuus L.)
-
Gutierrez-Mellado, M.C., Edwards, R., Tena, M., Cabello, F., Serghini, K. and Jorrin, J. (1996) The production of coumarin phytoalexins in different plant organs of sunflower (Helianthus annuus L.). J. Plant Physiol. 149, 261–266.
-
(1996)
J. Plant Physiol.
, vol.149
, pp. 261-266
-
-
Gutierrez-Mellado, M.C.1
Edwards, R.2
Tena, M.3
Cabello, F.4
Serghini, K.5
Jorrin, J.6
-
35
-
-
0344100119
-
A wound-inducible organelle derived from endoplasmic reticulum: a plant strategy against environmental stresses?
-
Hara-Nishimura, I. and Matsushima, R. (2003) A wound-inducible organelle derived from endoplasmic reticulum: a plant strategy against environmental stresses? Curr. Opin. Plant Biol. 6, 583–588.
-
(2003)
Curr. Opin. Plant Biol.
, vol.6
, pp. 583-588
-
-
Hara-Nishimura, I.1
Matsushima, R.2
-
36
-
-
0034797989
-
A proteinase-storing body that prepares for cell death or stresses in the epidermal cells of Arabidopsis
-
Hayashi, Y., Yamada, K., Shimada, T., Matsushima, R., Nishizawa, N., Nishimura, M. and Hara-Nishimura, I. (2001) A proteinase-storing body that prepares for cell death or stresses in the epidermal cells of Arabidopsis. Plant Cell Physiol. 42, 894–899.
-
(2001)
Plant Cell Physiol.
, vol.42
, pp. 894-899
-
-
Hayashi, Y.1
Yamada, K.2
Shimada, T.3
Matsushima, R.4
Nishizawa, N.5
Nishimura, M.6
Hara-Nishimura, I.7
-
37
-
-
34547526914
-
Omics-based identification of Arabidopsis Myb transcription factors regulating aliphatic glucosinolate biosynthesis
-
Hirai, M.Y., Sugiyama, K., Sawada, Y. et al. (2007) Omics-based identification of Arabidopsis Myb transcription factors regulating aliphatic glucosinolate biosynthesis. Proc. Natl Acad. Sci. USA, 104, 6478–6483.
-
(2007)
Proc. Natl Acad. Sci. USA
, vol.104
, pp. 6478-6483
-
-
Hirai, M.Y.1
Sugiyama, K.2
Sawada, Y.3
-
38
-
-
84961196851
-
Root endophyte colletotrichum tofieldiae confers plant fitness benefits that are phosphate status dependent
-
Hiruma, K., Gerlach, N., Sacristan, S. et al. (2016) Root endophyte colletotrichum tofieldiae confers plant fitness benefits that are phosphate status dependent. Cell, 165, 464–474.
-
(2016)
Cell
, vol.165
, pp. 464-474
-
-
Hiruma, K.1
Gerlach, N.2
Sacristan, S.3
-
39
-
-
83255167372
-
Tubules in dilated cisternae of endoplasmic reticulum of Thlaspi arvense (Cruciferae)
-
Hoefert, L.L. (1975) Tubules in dilated cisternae of endoplasmic reticulum of Thlaspi arvense (Cruciferae). Am. J. Bot. 62, 756–760.
-
(1975)
Am. J. Bot.
, vol.62
, pp. 756-760
-
-
Hoefert, L.L.1
-
40
-
-
84868007353
-
Dendroscope 3: an interactive tool for rooted phylogenetic trees and networks
-
Huson, D.H. and Scornavacca, C. (2012) Dendroscope 3: an interactive tool for rooted phylogenetic trees and networks. Syst. Biol. 61, 1061–1067.
-
(2012)
Syst. Biol.
, vol.61
, pp. 1061-1067
-
-
Huson, D.H.1
Scornavacca, C.2
-
41
-
-
38649092410
-
Dendroscope: an interactive viewer for large phylogenetic trees
-
Huson, D.H., Richter, D.C., Rausch, C., Dezulian, T., Franz, M. and Rupp, R. (2007) Dendroscope: an interactive viewer for large phylogenetic trees. BMC Bioinformatics, 8, 460.
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 460
-
-
Huson, D.H.1
Richter, D.C.2
Rausch, C.3
Dezulian, T.4
Franz, M.5
Rupp, R.6
-
42
-
-
84868589246
-
Transcriptional activation and production of tryptophan-derived secondary metabolites in arabidopsis roots contributes to the defense against the fungal vascular pathogen Verticillium longisporum
-
Iven, T., Konig, S., Singh, S., Braus-Stromeyer, S.A., Bischoff, M., Tietze, L.F., Braus, G.H., Lipka, V., Feussner, I. and Droge-Laser, W. (2012) Transcriptional activation and production of tryptophan-derived secondary metabolites in arabidopsis roots contributes to the defense against the fungal vascular pathogen Verticillium longisporum. Mol. Plant, 5, 1389–1402.
-
(2012)
Mol. Plant
, vol.5
, pp. 1389-1402
-
-
Iven, T.1
Konig, S.2
Singh, S.3
Braus-Stromeyer, S.A.4
Bischoff, M.5
Tietze, L.F.6
Braus, G.H.7
Lipka, V.8
Feussner, I.9
Droge-Laser, W.10
-
43
-
-
0000106608
-
Cytochemical localization of myrosinase (β-thioglucosidase) in root tips of Sinapis alba
-
Iversen, T.-H. (1970a) Cytochemical localization of myrosinase (β-thioglucosidase) in root tips of Sinapis alba. Protoplasma, 71, 451–466.
-
(1970)
Protoplasma
, vol.71
, pp. 451-466
-
-
Iversen, T.-H.1
-
44
-
-
0000838661
-
The morphology, occurrence, and distribution of dilated cisternae of the endoplasmic reticulum in tissues of plants of the Cruciferae
-
Iversen, T.-H. (1970b) The morphology, occurrence, and distribution of dilated cisternae of the endoplasmic reticulum in tissues of plants of the Cruciferae. Protoplasma, 71, 467–477.
-
(1970)
Protoplasma
, vol.71
, pp. 467-477
-
-
Iversen, T.-H.1
-
45
-
-
34250495482
-
Rod-shaped accumulations in cisternae of the endoplasmic reticulum in root cells of Lepidium sativum seedlings
-
Iversen, T.-H. and Flood, P.R. (1969) Rod-shaped accumulations in cisternae of the endoplasmic reticulum in root cells of Lepidium sativum seedlings. Planta, 86, 295–298.
-
(1969)
Planta
, vol.86
, pp. 295-298
-
-
Iversen, T.-H.1
Flood, P.R.2
-
46
-
-
0034979837
-
The TASTY locus on chromosome 1 of Arabidopsis affects feeding of the insect herbivore Trichoplusia ni
-
Jander, G., Cui, J., Nhan, B., Pierce, N.E. and Ausubel, F.M. (2001) The TASTY locus on chromosome 1 of Arabidopsis affects feeding of the insect herbivore Trichoplusia ni. Plant Physiol. 126, 890–898.
-
(2001)
Plant Physiol.
, vol.126
, pp. 890-898
-
-
Jander, G.1
Cui, J.2
Nhan, B.3
Pierce, N.E.4
Ausubel, F.M.5
-
47
-
-
0000321028
-
Myrosin cells and dilated cisternae of the endoplasmic reticulum in the order Capparales
-
Jørgensen, L.B. (1981) Myrosin cells and dilated cisternae of the endoplasmic reticulum in the order Capparales. Nord. J. Bot. 1, 433–445.
-
(1981)
Nord. J. Bot.
, vol.1
, pp. 433-445
-
-
Jørgensen, L.B.1
-
48
-
-
0001085202
-
Protein-accumulating cells and dilated cisternae of the endoplasmic reticulum in three glucosinolate-containing genera: Armoracia, Capparis, Drypetes
-
Jørgensen, L.B., Behnke, H.D. and Mabry, T.J. (1977) Protein-accumulating cells and dilated cisternae of the endoplasmic reticulum in three glucosinolate-containing genera: Armoracia, Capparis, Drypetes. Planta, 137, 215–224.
-
(1977)
Planta
, vol.137
, pp. 215-224
-
-
Jørgensen, L.B.1
Behnke, H.D.2
Mabry, T.J.3
-
49
-
-
84875619226
-
MAFFT multiple sequence alignment software version 7: improvements in performance and usability
-
Katoh, K. and Standley, D.M. (2013) MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol. Biol. Evol. 30, 772–780.
-
(2013)
Mol. Biol. Evol.
, vol.30
, pp. 772-780
-
-
Katoh, K.1
Standley, D.M.2
-
50
-
-
84878268346
-
MYC2: the master in action
-
Kazan, K. and Manners, J.M. (2013) MYC2: the master in action. Mol. Plant, 6, 686–703.
-
(2013)
Mol. Plant
, vol.6
, pp. 686-703
-
-
Kazan, K.1
Manners, J.M.2
-
51
-
-
66449108674
-
Nitrile-specifier proteins involved in glucosinolate hydrolysis in Arabidopsis thaliana
-
Kissen, R. and Bones, A.M. (2009) Nitrile-specifier proteins involved in glucosinolate hydrolysis in Arabidopsis thaliana. J. Biol. Chem. 284, 12057–12070.
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 12057-12070
-
-
Kissen, R.1
Bones, A.M.2
-
52
-
-
0033794245
-
Identification of a new glucosinolate-rich cell type in Arabidopsis flower stalk
-
Koroleva, O.A., Davies, A., Deeken, R., Thorpe, M.R., Tomos, A.D. and Hedrich, R. (2000) Identification of a new glucosinolate-rich cell type in Arabidopsis flower stalk. Plant Physiol. 124, 599–608.
-
(2000)
Plant Physiol.
, vol.124
, pp. 599-608
-
-
Koroleva, O.A.1
Davies, A.2
Deeken, R.3
Thorpe, M.R.4
Tomos, A.D.5
Hedrich, R.6
-
53
-
-
78149417008
-
Glucosinolate-accumulating S-cells in Arabidopsis leaves and flower stalks undergo programmed cell death at early stages of differentiation
-
Koroleva, O.A., Gibson, T.M., Cramer, R. and Stain, C. (2010) Glucosinolate-accumulating S-cells in Arabidopsis leaves and flower stalks undergo programmed cell death at early stages of differentiation. Plant J. 64, 456–469.
-
(2010)
Plant J.
, vol.64
, pp. 456-469
-
-
Koroleva, O.A.1
Gibson, T.M.2
Cramer, R.3
Stain, C.4
-
54
-
-
84936187728
-
Mutualistic root endophytism is not associated with the reduction of saprotrophic traits and requires a noncompromised plant innate immunity
-
Lahrmann, U., Strehmel, N., Langen, G., Frerigmann, H., Leson, L., Ding, Y., Scheel, D., Herklotz, S., Hilbert, M. and Zuccaro, A. (2015) Mutualistic root endophytism is not associated with the reduction of saprotrophic traits and requires a noncompromised plant innate immunity. New Phytol. 207, 841–857.
-
(2015)
New Phytol.
, vol.207
, pp. 841-857
-
-
Lahrmann, U.1
Strehmel, N.2
Langen, G.3
Frerigmann, H.4
Leson, L.5
Ding, Y.6
Scheel, D.7
Herklotz, S.8
Hilbert, M.9
Zuccaro, A.10
-
55
-
-
0035542786
-
The Arabidopsis epithiospecifier protein promotes the hydrolysis of glucosinolates to nitriles and influences Trichoplusia ni herbivory
-
Lambrix, V., Reichelt, M., Mitchell-Olds, T., Kliebenstein, D.J. and Gershenzon, J. (2001) The Arabidopsis epithiospecifier protein promotes the hydrolysis of glucosinolates to nitriles and influences Trichoplusia ni herbivory. Plant Cell, 13, 2793–2807.
-
(2001)
Plant Cell
, vol.13
, pp. 2793-2807
-
-
Lambrix, V.1
Reichelt, M.2
Mitchell-Olds, T.3
Kliebenstein, D.J.4
Gershenzon, J.5
-
56
-
-
85014768147
-
Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees
-
Letunic, I. and Bork, P. (2016) Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees. Nucleic Acids Res. 44, W242–W245.
-
(2016)
Nucleic Acids Res.
, vol.44
, pp. W242-W245
-
-
Letunic, I.1
Bork, P.2
-
57
-
-
27944454718
-
Pre- and postinvasion defenses both contribute to nonhost resistance in Arabidopsis
-
Lipka, V., Dittgen, J., Bednarek, P. et al. (2005) Pre- and postinvasion defenses both contribute to nonhost resistance in Arabidopsis. Science, 310, 1180–1183.
-
(2005)
Science
, vol.310
, pp. 1180-1183
-
-
Lipka, V.1
Dittgen, J.2
Bednarek, P.3
-
58
-
-
84867033435
-
Bridging the gap between single-template and fragment based protein structure modeling using Spanner
-
Lis, M., Kim, T., Sarmiento, J., Kuroda, D., Dinh, H., Kinjo, A.R., Amada, K., Devadas, S., Nakamura, H. and Standley, D.M. (2011) Bridging the gap between single-template and fragment based protein structure modeling using Spanner. Immunome Res. 7, 1–8.
-
(2011)
Immunome Res.
, vol.7
, pp. 1-8
-
-
Lis, M.1
Kim, T.2
Sarmiento, J.3
Kuroda, D.4
Dinh, H.5
Kinjo, A.R.6
Amada, K.7
Devadas, S.8
Nakamura, H.9
Standley, D.M.10
-
59
-
-
84936166457
-
Mutant allele-specific uncoupling of PENETRATION3 functions reveals engagement of the ATP-binding cassette transporter in distinct tryptophan metabolic pathways
-
Lu, X., Dittgen, J., Pislewska-Bednarek, M. et al. (2015) Mutant allele-specific uncoupling of PENETRATION3 functions reveals engagement of the ATP-binding cassette transporter in distinct tryptophan metabolic pathways. Plant Physiol. 168, 814–827.
-
(2015)
Plant Physiol.
, vol.168
, pp. 814-827
-
-
Lu, X.1
Dittgen, J.2
Pislewska-Bednarek, M.3
-
60
-
-
0346037065
-
An endoplasmic reticulum-derived structure that is induced under stress conditions in Arabidopsis
-
Matsushima, R., Hayashi, Y., Kondo, M., Shimada, T., Nishimura, M. and Hara-Nishimura, I. (2002) An endoplasmic reticulum-derived structure that is induced under stress conditions in Arabidopsis. Plant Physiol. 130, 1807–1814.
-
(2002)
Plant Physiol.
, vol.130
, pp. 1807-1814
-
-
Matsushima, R.1
Hayashi, Y.2
Kondo, M.3
Shimada, T.4
Nishimura, M.5
Hara-Nishimura, I.6
-
61
-
-
0242515793
-
A novel ER-derived compartment, the ER body, selectively accumulates a β-glucosidase with an ER-retention signal in Arabidopsis
-
Matsushima, R., Kondo, M., Nishimura, M. and Hara-Nishimura, I. (2003) A novel ER-derived compartment, the ER body, selectively accumulates a β-glucosidase with an ER-retention signal in Arabidopsis. Plant J. 33, 493–502.
-
(2003)
Plant J.
, vol.33
, pp. 493-502
-
-
Matsushima, R.1
Kondo, M.2
Nishimura, M.3
Hara-Nishimura, I.4
-
62
-
-
2942677348
-
NAI1 gene encodes a basic-helix-loop-helix–type putative transcription factor that regulates the formation of an endoplasmic reticulum-derived structure, the ER body
-
Matsushima, R., Fukao, Y., Nishimura, M. and Hara-Nishimura, I. (2004) NAI1 gene encodes a basic-helix-loop-helix–type putative transcription factor that regulates the formation of an endoplasmic reticulum-derived structure, the ER body. Plant Cell, 16, 1536–1549.
-
(2004)
Plant Cell
, vol.16
, pp. 1536-1549
-
-
Matsushima, R.1
Fukao, Y.2
Nishimura, M.3
Hara-Nishimura, I.4
-
63
-
-
0346033436
-
Modulation of CYP79 genes and glucosinolate profiles in Arabidopsis by defense signaling pathways
-
Mikkelsen, M.D., Petersen, B.L., Glawischnig, E., Jensen, A.B., Andreasson, E. and Halkier, B.A. (2003) Modulation of CYP79 genes and glucosinolate profiles in Arabidopsis by defense signaling pathways. Plant Physiol. 131, 298–308.
-
(2003)
Plant Physiol.
, vol.131
, pp. 298-308
-
-
Mikkelsen, M.D.1
Petersen, B.L.2
Glawischnig, E.3
Jensen, A.B.4
Andreasson, E.5
Halkier, B.A.6
-
64
-
-
78249232015
-
Glucosinolate biochemical diversity and innovation in the Brassicales
-
Mithen, R., Bennett, R. and Marquez, J. (2010) Glucosinolate biochemical diversity and innovation in the Brassicales. Phytochemistry, 71, 2074–2086.
-
(2010)
Phytochemistry
, vol.71
, pp. 2074-2086
-
-
Mithen, R.1
Bennett, R.2
Marquez, J.3
-
65
-
-
44549087929
-
β-Glucosidases as detonators of plant chemical defense
-
Morant, A.V., Jørgensen, K., Jørgensen, C., Paquette, S.M., Sánchez-Pérez, R., Møller, B.L. and Bak, S. (2008) β-Glucosidases as detonators of plant chemical defense. Phytochemistry, 69, 1795–1813.
-
(2008)
Phytochemistry
, vol.69
, pp. 1795-1813
-
-
Morant, A.V.1
Jørgensen, K.2
Jørgensen, C.3
Paquette, S.M.4
Sánchez-Pérez, R.5
Møller, B.L.6
Bak, S.7
-
66
-
-
84875483881
-
High-resolution metabolic mapping of cell types in plant roots
-
Moussaieff, A., Rogachev, I., Brodsky, L., Malitsky, S., Toal, T.W., Belcher, H., Yativ, M., Brady, S.M., Benfey, P.N. and Aharoni, A. (2013) High-resolution metabolic mapping of cell types in plant roots. Proc. Natl Acad. Sci. USA, 110, E1232–E1241.
-
(2013)
Proc. Natl Acad. Sci. USA
, vol.110
, pp. E1232-E1241
-
-
Moussaieff, A.1
Rogachev, I.2
Brodsky, L.3
Malitsky, S.4
Toal, T.W.5
Belcher, H.6
Yativ, M.7
Brady, S.M.8
Benfey, P.N.9
Aharoni, A.10
-
67
-
-
84936139155
-
TRANSCRIPTION ACTIVATOR-LIKE EFFECTOR NUCLEASE-mediated generation and metabolic analysis of camalexin-deficient cyp71a12 cyp71a13 double knockout lines
-
Muller, T.M., Bottcher, C., Morbitzer, R., Gotz, C.C., Lehmann, J., Lahaye, T. and Glawischnig, E. (2015) TRANSCRIPTION ACTIVATOR-LIKE EFFECTOR NUCLEASE-mediated generation and metabolic analysis of camalexin-deficient cyp71a12 cyp71a13 double knockout lines. Plant Physiol. 168, 849–858.
-
(2015)
Plant Physiol.
, vol.168
, pp. 849-858
-
-
Muller, T.M.1
Bottcher, C.2
Morbitzer, R.3
Gotz, C.C.4
Lehmann, J.5
Lahaye, T.6
Glawischnig, E.7
-
68
-
-
34547701767
-
Arabidopsis cytochrome P450 monooxygenase 71A13 catalyzes the conversion of indole-3-acetaldoxime in camalexin synthesis
-
Nafisi, M., Goregaoker, S., Botanga, C.J., Glawischnig, E., Olsen, C.E., Halkier, B.A. and Glazebrook, J. (2007) Arabidopsis cytochrome P450 monooxygenase 71A13 catalyzes the conversion of indole-3-acetaldoxime in camalexin synthesis. Plant Cell, 19, 2039–2052.
-
(2007)
Plant Cell
, vol.19
, pp. 2039-2052
-
-
Nafisi, M.1
Goregaoker, S.2
Botanga, C.J.3
Glawischnig, E.4
Olsen, C.E.5
Halkier, B.A.6
Glazebrook, J.7
-
69
-
-
48849112921
-
Antagonistic jacalin-related lectins regulate the size of ER body-type β-glucosidase complexes in Arabidopsis thaliana
-
Nagano, A.J., Fukao, Y., Fujiwara, M., Nishimura, M. and Hara-Nishimura, I. (2008) Antagonistic jacalin-related lectins regulate the size of ER body-type β-glucosidase complexes in Arabidopsis thaliana. Plant Cell Physiol. 49, 969–980.
-
(2008)
Plant Cell Physiol.
, vol.49
, pp. 969-980
-
-
Nagano, A.J.1
Fukao, Y.2
Fujiwara, M.3
Nishimura, M.4
Hara-Nishimura, I.5
-
70
-
-
72649104796
-
Quantitative analysis of ER body morphology in an Arabidopsis mutant
-
Nagano, A.J., Maekawa, A., Nakano, R.T., Miyahara, M., Higaki, T., Kutsuna, N., Hasezawa, S. and Hara-Nishimura, I. (2009) Quantitative analysis of ER body morphology in an Arabidopsis mutant. Plant Cell Physiol. 50, 2015–2022.
-
(2009)
Plant Cell Physiol.
, vol.50
, pp. 2015-2022
-
-
Nagano, A.J.1
Maekawa, A.2
Nakano, R.T.3
Miyahara, M.4
Higaki, T.5
Kutsuna, N.6
Hasezawa, S.7
Hara-Nishimura, I.8
-
71
-
-
84869101190
-
ERMO3/MVP1/GOLD36 is involved in a cell type-specific mechanism for maintaining ER morphology in Arabidopsis thaliana
-
Nakano, R.T., Matsushima, R., Nagano, A.J., Fukao, Y., Fujiwara, M., Kondo, M., Nishimura, M. and Hara-Nishimura, I. (2012) ERMO3/MVP1/GOLD36 is involved in a cell type-specific mechanism for maintaining ER morphology in Arabidopsis thaliana. PLoS ONE, 7, e49103.
-
(2012)
PLoS ONE
, vol.7
-
-
Nakano, R.T.1
Matsushima, R.2
Nagano, A.J.3
Fukao, Y.4
Fujiwara, M.5
Kondo, M.6
Nishimura, M.7
Hara-Nishimura, I.8
-
72
-
-
84901047707
-
ER bodies in plants of the Brassicales order: biogenesis and association with innate immunity
-
Nakano, R.T., Yamada, K., Bednarek, P., Nishimura, M. and Hara-Nishimura, I. (2014) ER bodies in plants of the Brassicales order: biogenesis and association with innate immunity. Front. Plant Sci. 5, 73, doi: 10.3389/fpls.2014.00073.
-
(2014)
Front. Plant Sci.
, vol.5
, pp. 73
-
-
Nakano, R.T.1
Yamada, K.2
Bednarek, P.3
Nishimura, M.4
Hara-Nishimura, I.5
-
73
-
-
0034897186
-
Pyk10, a seedling and root specific gene and promoter from Arabidopsis thaliana
-
Nitz, I., Berkefeld, H., Puzio, P.S. and Grundler, F.M.W. (2001) Pyk10, a seedling and root specific gene and promoter from Arabidopsis thaliana. Plant Sci. 161, 337–346.
-
(2001)
Plant Sci.
, vol.161
, pp. 337-346
-
-
Nitz, I.1
Berkefeld, H.2
Puzio, P.S.3
Grundler, F.M.W.4
-
74
-
-
77957240713
-
Characterization of a novel beta-thioglucosidase CpTGG1 in Carica papaya and its substrate-dependent and ascorbic acid-independent O-beta-glucosidase activity
-
Nong, H., Zhang, J.M., Li, D.Q., Wang, M., Sun, X.P., Zhu, Y.J., Meijer, J. and Wang, Q.H. (2010) Characterization of a novel beta-thioglucosidase CpTGG1 in Carica papaya and its substrate-dependent and ascorbic acid-independent O-beta-glucosidase activity. J. Integr. Plant Biol. 52, 879–890.
-
(2010)
J. Integr. Plant Biol.
, vol.52
, pp. 879-890
-
-
Nong, H.1
Zhang, J.M.2
Li, D.Q.3
Wang, M.4
Sun, X.P.5
Zhu, Y.J.6
Meijer, J.7
Wang, Q.H.8
-
75
-
-
73249114746
-
Rank of correlation coefficient as a comparable measure for biological significance of gene coexpression
-
Obayashi, T. and Kinoshita, K. (2009) Rank of correlation coefficient as a comparable measure for biological significance of gene coexpression. DNA Res. 16, 249–260.
-
(2009)
DNA Res.
, vol.16
, pp. 249-260
-
-
Obayashi, T.1
Kinoshita, K.2
-
76
-
-
33846061087
-
ATTED-II: a database of co-expressed genes and cis elements for identifying co-regulated gene groups in Arabidopsis
-
Obayashi, T., Kinoshita, K., Nakai, K., Shibaoka, M., Hayashi, S., Saeki, M., Shibata, D., Saito, K. and Ohta, H. (2007) ATTED-II: a database of co-expressed genes and cis elements for identifying co-regulated gene groups in Arabidopsis. Nucleic Acids Res. 35, D863–D869.
-
(2007)
Nucleic Acids Res.
, vol.35
, pp. D863-D869
-
-
Obayashi, T.1
Kinoshita, K.2
Nakai, K.3
Shibaoka, M.4
Hayashi, S.5
Saeki, M.6
Shibata, D.7
Saito, K.8
Ohta, H.9
-
77
-
-
79951562208
-
ATTED-II updates: condition-specific gene coexpression to extend coexpression analyses and applications to a broad range of flowering plants
-
Obayashi, T., Nishida, K., Kasahara, K. and Kinoshita, K. (2011) ATTED-II updates: condition-specific gene coexpression to extend coexpression analyses and applications to a broad range of flowering plants. Plant Cell Physiol. 52, 213–219.
-
(2011)
Plant Cell Physiol.
, vol.52
, pp. 213-219
-
-
Obayashi, T.1
Nishida, K.2
Kasahara, K.3
Kinoshita, K.4
-
78
-
-
63049105704
-
Constitutive and inducible ER bodies of Arabidopsis thaliana accumulate distinct β-glucosidases
-
Ogasawara, K., Yamada, K., Christeller, J.T., Kondo, M., Hatsugai, N., Hara-Nishimura, I. and Nishimura, M. (2009) Constitutive and inducible ER bodies of Arabidopsis thaliana accumulate distinct β-glucosidases. Plant Cell Physiol. 50, 480–488.
-
(2009)
Plant Cell Physiol.
, vol.50
, pp. 480-488
-
-
Ogasawara, K.1
Yamada, K.2
Christeller, J.T.3
Kondo, M.4
Hatsugai, N.5
Hara-Nishimura, I.6
Nishimura, M.7
-
79
-
-
66449095003
-
The gene controlling the indole glucosinolate modifier1 quantitative trait locus alters indole glucosinolate structures and aphid resistance in Arabidopsis
-
Pfalz, M., Vogel, H. and Kroymann, J. (2009) The gene controlling the indole glucosinolate modifier1 quantitative trait locus alters indole glucosinolate structures and aphid resistance in Arabidopsis. Plant Cell, 21, 985–999.
-
(2009)
Plant Cell
, vol.21
, pp. 985-999
-
-
Pfalz, M.1
Vogel, H.2
Kroymann, J.3
-
80
-
-
79953067657
-
Metabolic engineering in Nicotiana benthamiana reveals key enzyme functions in Arabidopsis indole glucosinolate modification
-
Pfalz, M., Mikkelsen, M.D., Bednarek, P., Olsen, C.E., Halkier, B.A. and Kroymann, J. (2011) Metabolic engineering in Nicotiana benthamiana reveals key enzyme functions in Arabidopsis indole glucosinolate modification. Plant Cell, 23, 716–729.
-
(2011)
Plant Cell
, vol.23
, pp. 716-729
-
-
Pfalz, M.1
Mikkelsen, M.D.2
Bednarek, P.3
Olsen, C.E.4
Halkier, B.A.5
Kroymann, J.6
-
81
-
-
52649161901
-
Transcription factor MYC2 is involved in priming for enhanced defense during rhizobacteria-induced systemic resistance in Arabidopsis thaliana
-
Pozo, M.J., Van Der Ent, S., Van Loon, L.C. and Pieterse, C.M.J. (2008) Transcription factor MYC2 is involved in priming for enhanced defense during rhizobacteria-induced systemic resistance in Arabidopsis thaliana. New Phytol. 180, 511–523.
-
(2008)
New Phytol.
, vol.180
, pp. 511-523
-
-
Pozo, M.J.1
Van Der Ent, S.2
Van Loon, L.C.3
Pieterse, C.M.J.4
-
82
-
-
84942068153
-
A new cyanogenic metabolite in Arabidopsis required for inducible pathogen defence
-
Rajniak, J., Barco, B., Clay, N.K. and Sattely, E.S. (2015) A new cyanogenic metabolite in Arabidopsis required for inducible pathogen defence. Nature, 525, 376–379.
-
(2015)
Nature
, vol.525
, pp. 376-379
-
-
Rajniak, J.1
Barco, B.2
Clay, N.K.3
Sattely, E.S.4
-
83
-
-
84892997115
-
Evolution of the bHLH genes involved in stomatal development: implications for the expansion of developmental complexity of stomata in land plants
-
Ran, J.H., Shen, T.T., Liu, W.J. and Wang, X.Q. (2013) Evolution of the bHLH genes involved in stomatal development: implications for the expansion of developmental complexity of stomata in land plants. PLoS ONE, 8, e78997.
-
(2013)
PLoS ONE
, vol.8
-
-
Ran, J.H.1
Shen, T.T.2
Liu, W.J.3
Wang, X.Q.4
-
84
-
-
0343262657
-
Myrosinase: gene family evolution and herbivore defense in Brassicaceae
-
Rask, L., Andreasson, E., Ekbom, B., Eriksson, S., Pontoppidan, B. and Meijer, J. (2000) Myrosinase: gene family evolution and herbivore defense in Brassicaceae. Plant Mol. Biol. 42, 93–113.
-
(2000)
Plant Mol. Biol.
, vol.42
, pp. 93-113
-
-
Rask, L.1
Andreasson, E.2
Ekbom, B.3
Eriksson, S.4
Pontoppidan, B.5
Meijer, J.6
-
85
-
-
84856489442
-
HHblits: lightning-fast iterative protein sequence searching by HMM-HMM alignment
-
Remmert, M., Biegert, A., Hauser, A. and Soding, J. (2012) HHblits: lightning-fast iterative protein sequence searching by HMM-HMM alignment. Nat. Methods, 9, 173–175.
-
(2012)
Nat. Methods
, vol.9
, pp. 173-175
-
-
Remmert, M.1
Biegert, A.2
Hauser, A.3
Soding, J.4
-
86
-
-
0023453329
-
Silhouettes – a graphical aid to the interpretation and validation of cluster-analysis
-
Rousseeuw, P.J. (1987) Silhouettes – a graphical aid to the interpretation and validation of cluster-analysis. J. Comput. Appl. Math. 20, 53–65.
-
(1987)
J. Comput. Appl. Math.
, vol.20
, pp. 53-65
-
-
Rousseeuw, P.J.1
-
87
-
-
77951880802
-
Metabolomics for functional genomics, systems biology, and biotechnology
-
Saito, K. and Matsuda, F. (2010) Metabolomics for functional genomics, systems biology, and biotechnology. Annu. Rev. Plant Biol. 61, 463–489.
-
(2010)
Annu. Rev. Plant Biol.
, vol.61
, pp. 463-489
-
-
Saito, K.1
Matsuda, F.2
-
88
-
-
37849020436
-
Decoding genes with coexpression networks and metabolomics – ‘majority report by precogs’
-
Saito, K., Hirai, M.Y. and Yonekura-Sakakibara, K. (2008) Decoding genes with coexpression networks and metabolomics – ‘majority report by precogs’. Trends Plant Sci. 13, 36–43.
-
(2008)
Trends Plant Sci.
, vol.13
, pp. 36-43
-
-
Saito, K.1
Hirai, M.Y.2
Yonekura-Sakakibara, K.3
-
89
-
-
77954303048
-
Tryptophan-derived secondary metabolites in Arabidopsis thaliana confer non-host resistance to necrotrophic Plectosphaerella cucumerina fungi
-
Sanchez-Vallet, A., Ramos, B., Bednarek, P., Lopez, G., Pislewska-Bednarek, M., Schulze-Lefert, P. and Molina, A. (2010) Tryptophan-derived secondary metabolites in Arabidopsis thaliana confer non-host resistance to necrotrophic Plectosphaerella cucumerina fungi. Plant J. 63, 115–127.
-
(2010)
Plant J.
, vol.63
, pp. 115-127
-
-
Sanchez-Vallet, A.1
Ramos, B.2
Bednarek, P.3
Lopez, G.4
Pislewska-Bednarek, M.5
Schulze-Lefert, P.6
Molina, A.7
-
90
-
-
84891770385
-
Feruloyl-CoA 6’-Hydroxylase1-dependent coumarins mediate iron acquisition from alkaline substrates in arabidopsis
-
Schmid, N.B., Giehl, R.F., Doll, S., Mock, H.P., Strehmel, N., Scheel, D., Kong, X., Hider, R.C. and von Wiren, N. (2014) Feruloyl-CoA 6’-Hydroxylase1-dependent coumarins mediate iron acquisition from alkaline substrates in arabidopsis. Plant Physiol. 164, 160–172.
-
(2014)
Plant Physiol.
, vol.164
, pp. 160-172
-
-
Schmid, N.B.1
Giehl, R.F.2
Doll, S.3
Mock, H.P.4
Strehmel, N.5
Scheel, D.6
Kong, X.7
Hider, R.C.8
von Wiren, N.9
-
91
-
-
84884679689
-
Arabidopsis basic helix-loop-helix transcription factors MYC2, MYC3, and MYC4 regulate glucosinolate biosynthesis, insect performance, and feeding behavior
-
Schweizer, F., Fernandez-Calvo, P., Zander, M., Diez-Diaz, M., Fonseca, S., Glauser, G., Lewsey, M.G., Ecker, J.R., Solano, R. and Reymond, P. (2013) Arabidopsis basic helix-loop-helix transcription factors MYC2, MYC3, and MYC4 regulate glucosinolate biosynthesis, insect performance, and feeding behavior. Plant Cell, 25, 3117–3132.
-
(2013)
Plant Cell
, vol.25
, pp. 3117-3132
-
-
Schweizer, F.1
Fernandez-Calvo, P.2
Zander, M.3
Diez-Diaz, M.4
Fonseca, S.5
Glauser, G.6
Lewsey, M.G.7
Ecker, J.R.8
Solano, R.9
Reymond, P.10
-
92
-
-
84883776424
-
Organelle pH in the Arabidopsis endomembrane system
-
Shen, J., Zeng, Y., Zhuang, X., Sun, L., Yao, X., Pimpl, P. and Jiang, L. (2013) Organelle pH in the Arabidopsis endomembrane system. Mol. Plant, 6, 1419–1437.
-
(2013)
Mol. Plant
, vol.6
, pp. 1419-1437
-
-
Shen, J.1
Zeng, Y.2
Zhuang, X.3
Sun, L.4
Yao, X.5
Pimpl, P.6
Jiang, L.7
-
93
-
-
42549165922
-
PYK10, a β-glucosidase located in the endoplasmatic reticulum, is crucial for the beneficial interaction between Arabidopsis thaliana and the endophytic fungus Piriformospora indica
-
Sherameti, I., Venus, Y., Drzewiecki, C., Tripathi, S., Dan, V.M., Nitz, I., Varma, A., Grundler, F.M. and Oelmüller, R. (2008) PYK10, a β-glucosidase located in the endoplasmatic reticulum, is crucial for the beneficial interaction between Arabidopsis thaliana and the endophytic fungus Piriformospora indica. Plant J. 54, 428–439.
-
(2008)
Plant J.
, vol.54
, pp. 428-439
-
-
Sherameti, I.1
Venus, Y.2
Drzewiecki, C.3
Tripathi, S.4
Dan, V.M.5
Nitz, I.6
Varma, A.7
Grundler, F.M.8
Oelmüller, R.9
-
94
-
-
0042357049
-
Vacuolar processing enzymes are essential for proper processing of seed storage proteins in Arabidopsis thaliana
-
Shimada, T., Yamada, K., Kataoka, M. et al. (2003) Vacuolar processing enzymes are essential for proper processing of seed storage proteins in Arabidopsis thaliana. J. Biol. Chem. 278, 32292–32299.
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 32292-32299
-
-
Shimada, T.1
Yamada, K.2
Kataoka, M.3
-
95
-
-
84912142609
-
FAMA is an essential component for the differentiation of two distinct cell types, myrosin cells and guard cells, in Arabidopsis
-
Shirakawa, M., Ueda, H., Nagano, A.J., Shimada, T., Kohchi, T. and Hara-Nishimura, I. (2014) FAMA is an essential component for the differentiation of two distinct cell types, myrosin cells and guard cells, in Arabidopsis. Plant Cell, 26, 4039–4052.
-
(2014)
Plant Cell
, vol.26
, pp. 4039-4052
-
-
Shirakawa, M.1
Ueda, H.2
Nagano, A.J.3
Shimada, T.4
Kohchi, T.5
Hara-Nishimura, I.6
-
96
-
-
84979787912
-
FAMA: a molecular link between stomata and myrosin cells
-
Shirakawa, M., Ueda, M., Shimada, T. and Hara-Nishimura, I. (2016) FAMA: a molecular link between stomata and myrosin cells. Trends Plant Sci. 21, 861–871.
-
(2016)
Trends Plant Sci.
, vol.21
, pp. 861-871
-
-
Shirakawa, M.1
Ueda, M.2
Shimada, T.3
Hara-Nishimura, I.4
-
97
-
-
0029394773
-
Analysis of Arabidopsis mutants deficient in flavonoid biosynthesis
-
Shirley, B.W., Kubasek, W.L., Storz, G., Bruggemann, E., Koornneef, M., Ausubel, F.M. and Goodman, H.M. (1995) Analysis of Arabidopsis mutants deficient in flavonoid biosynthesis. Plant J. 8, 659–671.
-
(1995)
Plant J.
, vol.8
, pp. 659-671
-
-
Shirley, B.W.1
Kubasek, W.L.2
Storz, G.3
Bruggemann, E.4
Koornneef, M.5
Ausubel, F.M.6
Goodman, H.M.7
-
98
-
-
84988726256
-
Identification of QTLs affecting scopolin and scopoletin biosynthesis in Arabidopsis thaliana
-
Siwinska, J., Kadzinski, L., Banasiuk, R., Gwizdek-Wisniewska, A., Olry, A., Banecki, B., Lojkowska, E. and Ihnatowicz, A. (2014) Identification of QTLs affecting scopolin and scopoletin biosynthesis in Arabidopsis thaliana. BMC Plant Biol. 14, 280.
-
(2014)
BMC Plant Biol.
, vol.14
, pp. 280
-
-
Siwinska, J.1
Kadzinski, L.2
Banasiuk, R.3
Gwizdek-Wisniewska, A.4
Olry, A.5
Banecki, B.6
Lojkowska, E.7
Ihnatowicz, A.8
-
99
-
-
16344373015
-
Protein homology detection by HMM-HMM comparison
-
Soding, J. (2005) Protein homology detection by HMM-HMM comparison. Bioinformatics, 21, 951–960.
-
(2005)
Bioinformatics
, vol.21
, pp. 951-960
-
-
Soding, J.1
-
100
-
-
33750403801
-
RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
-
Stamatakis, A. (2006) RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics, 22, 2688–2690.
-
(2006)
Bioinformatics
, vol.22
, pp. 2688-2690
-
-
Stamatakis, A.1
-
101
-
-
33244489414
-
AtVAM3 is required for normal specification of idioblasts, myrosin cells
-
Ueda, H., Nishiyama, C., Shimada, T., Koumoto, Y., Hayashi, Y., Kondo, M., Takahashi, T., Ohtomo, I., Nishimura, M. and Hara-Nishimura, I. (2006) AtVAM3 is required for normal specification of idioblasts, myrosin cells. Plant Cell Physiol. 47, 164–175.
-
(2006)
Plant Cell Physiol.
, vol.47
, pp. 164-175
-
-
Ueda, H.1
Nishiyama, C.2
Shimada, T.3
Koumoto, Y.4
Hayashi, Y.5
Kondo, M.6
Takahashi, T.7
Ohtomo, I.8
Nishimura, M.9
Hara-Nishimura, I.10
-
102
-
-
77954257815
-
Lignin biosynthesis and structure
-
Vanholme, R., Demedts, B., Morreel, K., Ralph, J. and Boerjan, W. (2010) Lignin biosynthesis and structure. Plant Physiol. 153, 895–905.
-
(2010)
Plant Physiol.
, vol.153
, pp. 895-905
-
-
Vanholme, R.1
Demedts, B.2
Morreel, K.3
Ralph, J.4
Boerjan, W.5
-
103
-
-
84862996527
-
The rise of chemodiversity in plants
-
Weng, J.-K., Philippe, R.N. and Noel, J.P. (2012) The rise of chemodiversity in plants. Science, 336, 1667–1670.
-
(2012)
Science
, vol.336
, pp. 1667-1670
-
-
Weng, J.-K.1
Philippe, R.N.2
Noel, J.P.3
-
104
-
-
50649123292
-
Genotype, age, tissue, and environment regulate the structural outcome of glucosinolate activation
-
Wentzell, A.M. and Kliebenstein, D.J. (2008) Genotype, age, tissue, and environment regulate the structural outcome of glucosinolate activation. Plant Physiol. 147, 415–428.
-
(2008)
Plant Physiol.
, vol.147
, pp. 415-428
-
-
Wentzell, A.M.1
Kliebenstein, D.J.2
-
105
-
-
79960709179
-
Glucosinolate breakdown in Arabidopsis: mechanism, regulation and biological significance
-
Wittstock, U. and Burow, M. (2010) Glucosinolate breakdown in Arabidopsis: mechanism, regulation and biological significance. Arabidopsis Book, 8, e0134.
-
(2010)
Arabidopsis Book
, vol.8
-
-
Wittstock, U.1
Burow, M.2
-
106
-
-
20844435464
-
Functional genomic analysis of Arabidopsis thaliana glycoside hydrolase family 1
-
Xu, Z., Escamilla-Trevino, L., Zeng, L. et al. (2004) Functional genomic analysis of Arabidopsis thaliana glycoside hydrolase family 1. Plant Mol. Biol. 55, 343–367.
-
(2004)
Plant Mol. Biol.
, vol.55
, pp. 343-367
-
-
Xu, Z.1
Escamilla-Trevino, L.2
Zeng, L.3
-
107
-
-
57749091765
-
NAI2 Is an endoplasmic reticulum body component that enables ER body formation in Arabidopsis thaliana
-
Yamada, K., Nagano, A.J., Nishina, M., Hara-Nishimura, I. and Nishimura, M. (2008) NAI2 Is an endoplasmic reticulum body component that enables ER body formation in Arabidopsis thaliana. Plant Cell, 20, 2529–2540.
-
(2008)
Plant Cell
, vol.20
, pp. 2529-2540
-
-
Yamada, K.1
Nagano, A.J.2
Nishina, M.3
Hara-Nishimura, I.4
Nishimura, M.5
-
108
-
-
83255189504
-
Unique defense strategy by the endoplasmic reticulum body in plants
-
Yamada, K., Hara-Nishimura, I. and Nishimura, M. (2011) Unique defense strategy by the endoplasmic reticulum body in plants. Plant Cell Physiol. 52, 2039–2049.
-
(2011)
Plant Cell Physiol.
, vol.52
, pp. 2039-2049
-
-
Yamada, K.1
Hara-Nishimura, I.2
Nishimura, M.3
-
109
-
-
84886393786
-
Transcriptome coexpression analysis using ATTED-II for integrated transcriptomic/metabolomic analysis
-
Yonekura-Sakakibara, K. and Saito, K. (2013) Transcriptome coexpression analysis using ATTED-II for integrated transcriptomic/metabolomic analysis. Methods Mol. Biol. 1011, 317–326.
-
(2013)
Methods Mol. Biol
, vol.1011
, pp. 317-326
-
-
Yonekura-Sakakibara, K.1
Saito, K.2
-
110
-
-
84923068072
-
β-Glucosidase BGLU42 is a MYB72-dependent key regulator of rhizobacteria-induced systemic resistance and modulates iron deficiency responses in Arabidopsis roots
-
Zamioudis, C., Hanson, J. and Pieterse, C.M.J. (2014) β-Glucosidase BGLU42 is a MYB72-dependent key regulator of rhizobacteria-induced systemic resistance and modulates iron deficiency responses in Arabidopsis roots. New Phytol. 204, 368–379.
-
(2014)
New Phytol.
, vol.204
, pp. 368-379
-
-
Zamioudis, C.1
Hanson, J.2
Pieterse, C.M.J.3
-
111
-
-
84921388035
-
Auxin biosynthesis
-
Zhao, Y. (2014) Auxin biosynthesis. Arabidopsis Book, 12, e0173.
-
(2014)
Arabidopsis Book
, vol.12
-
-
Zhao, Y.1
-
112
-
-
84861217871
-
Properties of beta-thioglucoside hydrolases (TGG1 and TGG2) from leaves of Arabidopsis thaliana
-
Zhou, C., Tokuhisa, J.G., Bevan, D.R. and Esen, A. (2012) Properties of beta-thioglucoside hydrolases (TGG1 and TGG2) from leaves of Arabidopsis thaliana. Plant Sci. 191–192, 82–92.
-
(2012)
Plant Sci.
, vol.191-192
, pp. 82-92
-
-
Zhou, C.1
Tokuhisa, J.G.2
Bevan, D.R.3
Esen, A.4
|