메뉴 건너뛰기




Volumn 8, Issue 1, 2017, Pages

The microbiota continuum along the female reproductive tract and its relation to uterine-related diseases

(30)  Chen, Chen a   Song, Xiaolei a,b   Wei, Weixia c,d   Zhong, Huanzi a,e   Dai, Juanjuan c,d   Lan, Zhou a   Li, Fei a,b   Yu, Xinlei a   Feng, Qiang a   Wang, Zirong a   Xie, Hailiang a   Chen, Xiaomin a   Zeng, Chunwei a   Wen, Bo a   Zeng, Liping c,d   Du, Hui c,d   Tang, Huiru c,d   Xu, Changlu a,f   Xia, Yan a,b   Xia, Huihua a   more..


Author keywords

[No Author keywords available]

Indexed keywords

RNA 16S;

EID: 85031789460     PISSN: None     EISSN: 20411723     Source Type: Journal    
DOI: 10.1038/s41467-017-00901-0     Document Type: Article
Times cited : (667)

References (45)
  • 1
    • 36849051796 scopus 로고    scopus 로고
    • Globular structure of human ovulatory cervical mucus
    • Brunelli, R. et al. Globular structure of human ovulatory cervical mucus. FASEB J. 21, 3872-3876 (2007).
    • (2007) FASEB J , vol.21 , pp. 3872-3876
    • Brunelli, R.1
  • 2
    • 84872260955 scopus 로고    scopus 로고
    • Vaginal microbiome: Rethinking health and disease
    • Ma, B., Forney, L. J. & Ravel, J. Vaginal microbiome: rethinking health and disease. Annu. Rev. Microbiol. 66, 371-389 (2012).
    • (2012) Annu. Rev. Microbiol , vol.66 , pp. 371-389
    • Ma, B.1    Forney, L.J.2    Ravel, J.3
  • 3
    • 79952750340 scopus 로고    scopus 로고
    • Vaginal microbiome of reproductive-age women
    • Ravel, J. et al. Vaginal microbiome of reproductive-age women. Proc. Natl Acad. Sci. USA 108, 4680-4687 (2010).
    • (2010) Proc. Natl Acad. Sci. USA , vol.108 , pp. 4680-4687
    • Ravel, J.1
  • 4
    • 84860720391 scopus 로고    scopus 로고
    • Temporal dynamics of the human vaginal microbiota
    • Gajer, P. et al. Temporal dynamics of the human vaginal microbiota. Sci. Transl. Med. 4, 132ra52-132ra52 (2012).
    • (2012) Sci. Transl. Med , vol.4 , pp. 132ra52-132ra52
    • Gajer, P.1
  • 5
    • 84900535804 scopus 로고    scopus 로고
    • Dynamics and associations of microbial community types across the human body
    • Ding, T. & Schloss, P. D. Dynamics and associations of microbial community types across the human body. Nature 509, 357-360 (2014).
    • (2014) Nature , vol.509 , pp. 357-360
    • Ding, T.1    Schloss, P.D.2
  • 6
    • 0034682251 scopus 로고    scopus 로고
    • Intrauterine infection and preterm delivery
    • Goldenberg, R. L., Hauth, J. C. & Andrews, W. W. Intrauterine infection and preterm delivery. N. Engl. J. Med. 342, 1500-1507 (2000).
    • (2000) N. Engl. J. Med , vol.342 , pp. 1500-1507
    • Goldenberg, R.L.1    Hauth, J.C.2    Andrews, W.W.3
  • 7
    • 84890297508 scopus 로고    scopus 로고
    • Diversity of the vaginal microbiome correlates with preterm birth
    • Hyman, R. W. et al. Diversity of the vaginal microbiome correlates with preterm birth. Reprod. Sci. doi:10.1177/1933719113488838 (2013).
    • (2013) Reprod. Sci
    • Hyman, R.W.1
  • 8
    • 84901358163 scopus 로고    scopus 로고
    • The placenta harbors a unique microbiome
    • Aagaard, K. et al. The placenta harbors a unique microbiome. Sci. Transl. Med. 6, 237ra65 (2014).
    • (2014) Sci. Transl. Med , vol.6 , pp. 237ra65
    • Aagaard, K.1
  • 9
    • 84920644670 scopus 로고    scopus 로고
    • Reagent and laboratory contamination can critically impact sequence-based microbiome analyses
    • Salter, S. J. et al. Reagent and laboratory contamination can critically impact sequence-based microbiome analyses. BMC Biol. 12, 87 (2014).
    • (2014) BMC Biol , vol.12 , pp. 87
    • Salter, S.J.1
  • 11
    • 0020059792 scopus 로고
    • Quantitative bacteriology of amniotic fluid from women with clinical intraamniotic infection at term
    • Gibbs, R. S., Blanco, J. D., St Clair, P. J. & Castaneda, Y. S. Quantitative bacteriology of amniotic fluid from women with clinical intraamniotic infection at term. J. Infect. Dis. 145, 1-8 (1982).
    • (1982) J. Infect. Dis , vol.145 , pp. 1-8
    • Gibbs, R.S.1    Blanco, J.D.2    St Clair, P.J.3    Castaneda, Y.S.4
  • 12
    • 26444484367 scopus 로고    scopus 로고
    • Isolation of commensal bacteria from umbilical cord blood of healthy neonates born by cesarean section
    • Jiménez, E. et al. Isolation of commensal bacteria from umbilical cord blood of healthy neonates born by cesarean section. Curr. Microbiol. 51, 270-274 (2005).
    • (2005) Curr. Microbiol , vol.51 , pp. 270-274
    • Jiménez, E.1
  • 13
    • 34250683363 scopus 로고    scopus 로고
    • Pink-pigmented non-fermentative gram-negative rods associated with human infections : A clinical and diagnostic challenge
    • Hogue, R., Graves, M., Moler, S. & Janda, J. M. Pink-pigmented non-fermentative gram-negative rods associated with human infections : a clinical and diagnostic challenge. Infection 35, 126-133 (2007).
    • (2007) Infection , vol.35 , pp. 126-133
    • Hogue, R.1    Graves, M.2    Moler, S.3    Janda, J.M.4
  • 14
    • 84880644843 scopus 로고    scopus 로고
    • Identification by 16S rRNA gene sequencing of an Actinomyces hongkongensis isolate recovered from a patient with pelvic actinomycosis
    • Flynn, A. N., Lyndon, C. A. & Church, D. L. Identification by 16S rRNA gene sequencing of an Actinomyces hongkongensis isolate recovered from a patient with pelvic actinomycosis. J. Clin. Microbiol. 51, 2721-2723 (2013).
    • (2013) J. Clin. Microbiol , vol.51 , pp. 2721-2723
    • Flynn, A.N.1    Lyndon, C.A.2    Church, D.L.3
  • 15
    • 84964225157 scopus 로고    scopus 로고
    • Dermabacter vaginalis sp nov., isolated from human vaginal fluid
    • Chang, D.-H., Rhee, M.-S. & Kim, B.-C. Dermabacter vaginalis sp. nov., isolated from human vaginal fluid. Int. J. Syst. Evol. Microbiol. 66, 1881-1886 (2016).
    • (2016) Int. J. Syst. Evol. Microbiol , vol.66 , pp. 1881-1886
    • Chang, D.-H.1    Rhee, M.-S.2    Kim, B.-C.3
  • 16
    • 0017753212 scopus 로고
    • Vaginal colonization with Corynebacterium vaginale (Haemophilus vaginalis)
    • McCormack, W. M. et al. Vaginal colonization with Corynebacterium vaginale (Haemophilus vaginalis). J. Infect. Dis. 136, 740-745 (1977).
    • (1977) J. Infect. Dis , vol.136 , pp. 740-745
    • McCormack, W.M.1
  • 17
    • 77952407400 scopus 로고    scopus 로고
    • Pseudomonas aeruginosa secreted factors impair biofilm development in Candida albicans
    • Holcombe, L. J. et al. Pseudomonas aeruginosa secreted factors impair biofilm development in Candida albicans. Microbiology 156, 1476-1485 (2010).
    • (2010) Microbiology , vol.156 , pp. 1476-1485
    • Holcombe, L.J.1
  • 18
    • 0033914085 scopus 로고    scopus 로고
    • Natural products with antifungal activity from Pseudomonas biocontrol bacteria
    • Ligon, J. M. et al. Natural products with antifungal activity from Pseudomonas biocontrol bacteria. Pest Manag. Sci. 56, 688-695 (2000).
    • (2000) Pest Manag. Sci , vol.56 , pp. 688-695
    • Ligon, J.M.1
  • 19
    • 65249096027 scopus 로고    scopus 로고
    • Heterogeneity of vaginal microbial communities within individuals
    • Kim, T. K. et al. Heterogeneity of vaginal microbial communities within individuals. J Clin Microbiol. 47, 1181-1189 (2009).
    • (2009) J Clin Microbiol , vol.47 , pp. 1181-1189
    • Kim, T.K.1
  • 20
    • 63049089307 scopus 로고    scopus 로고
    • A Chinese rhesus macaque (Macaca mulatta) model for vaginal Lactobacillus colonization and live microbicide development
    • Yu, R. R. et al. A Chinese rhesus macaque (Macaca mulatta) model for vaginal Lactobacillus colonization and live microbicide development. J. Med. Primatol. 2, 125-136 (2009).
    • (2009) J. Med. Primatol , vol.2 , pp. 125-136
    • Yu, R.R.1
  • 21
    • 84943162394 scopus 로고    scopus 로고
    • A study of the vaginal microbiome in healthy Canadian women utilizing cpn60-based molecular profiling reveals distinct Gardnerella subgroup community state types
    • Albert, A. Y. K. et al. A study of the vaginal microbiome in healthy Canadian women utilizing cpn60-based molecular profiling reveals distinct Gardnerella subgroup community state types. PLoS ONE 10, 1-21 (2015).
    • (2015) PLoS ONE , vol.10 , pp. 1-21
    • Albert, A.Y.K.1
  • 22
    • 84870748102 scopus 로고    scopus 로고
    • Hormone-dependent bacterial growth, persistence and biofilm formation-A pilot study investigating human follicular fluid collected during IVF cycles
    • Pelzer, E. S. et al. Hormone-dependent bacterial growth, persistence and biofilm formation-a pilot study investigating human follicular fluid collected during IVF cycles. PLoS ONE 7, e49965 (2012).
    • (2012) PLoS ONE , vol.7 , pp. e49965
    • Pelzer, E.S.1
  • 23
    • 84883559534 scopus 로고    scopus 로고
    • TUNEL analysis of DNA fragmentation in mouse unfertilized oocytes: The effect of microorganisms within human follicular fluid collected during IVF cycles
    • Pelzer, E. S. et al. TUNEL analysis of DNA fragmentation in mouse unfertilized oocytes: The effect of microorganisms within human follicular fluid collected during IVF cycles. J. Reprod. Immunol. 99, 69-79 (2013).
    • (2013) J. Reprod. Immunol , vol.99 , pp. 69-79
    • Pelzer, E.S.1
  • 24
    • 84874860266 scopus 로고    scopus 로고
    • Microorganisms within human follicular fluid: Effects on IVF
    • Pelzer, E. S. et al. Microorganisms within human follicular fluid: effects on IVF. PLoS ONE 8, e59062 (2013).
    • (2013) PLoS ONE , vol.8 , pp. e59062
    • Pelzer, E.S.1
  • 25
    • 0032956143 scopus 로고    scopus 로고
    • Developmental microbial ecology of the neonatal gastrointestinal tract
    • Mackie, R. I., Sghir, A. & Gaskins, H. R. Developmental microbial ecology of the neonatal gastrointestinal tract. Am. J. Clin. Nutr. 69, 1035S-1045S (1999).
    • (1999) Am. J. Clin. Nutr , vol.69 , pp. 1035S-1045S
    • Mackie, R.I.1    Sghir, A.2    Gaskins, H.R.3
  • 27
    • 84929297936 scopus 로고    scopus 로고
    • Dynamics and stabilization of the human gut microbiome during the first year of life
    • Bäckhed, F. et al. Dynamics and stabilization of the human gut microbiome during the first year of life. Cell Host Microbe 17, 690-703 (2015).
    • (2015) Cell Host Microbe , vol.17 , pp. 690-703
    • Bäckhed, F.1
  • 28
    • 84883186674 scopus 로고    scopus 로고
    • Mom knows best: The Universality of maternal microbial transmission
    • Funkhouser, L. J. & Bordenstein, S. R. Mom knows best: the Universality of maternal microbial transmission. PLoS Biol. 11, e1001631 (2013).
    • (2013) PLoS Biol , vol.11 , pp. e1001631
    • Funkhouser, L.J.1    Bordenstein, S.R.2
  • 29
    • 40249084225 scopus 로고    scopus 로고
    • Chronic endometritis: Correlation among hysteroscopic, histologic, and bacteriologic findings in a prospective trial with 2190 consecutive office hysteroscopies
    • Cicinelli, E. et al. Chronic endometritis: correlation among hysteroscopic, histologic, and bacteriologic findings in a prospective trial with 2190 consecutive office hysteroscopies. Fertil. Steril. 89, 677-684 (2008).
    • (2008) Fertil. Steril , vol.89 , pp. 677-684
    • Cicinelli, E.1
  • 30
    • 84997503540 scopus 로고    scopus 로고
    • Potential contribution of the uterine microbiome in the development of endometrial cancer
    • Walther-António, M. R. S. et al. Potential contribution of the uterine microbiome in the development of endometrial cancer. Genome Med 8, 122 (2016).
    • (2016) Genome Med , vol.8 , pp. 122
    • Walther-António, M.R.S.1
  • 32
    • 84978127724 scopus 로고    scopus 로고
    • Metagenome-wide association studies: Fine-mining the microbiome
    • Wang, J. & Jia, H. Metagenome-wide association studies: fine-mining the microbiome. Nat. Rev. Microbiol. 14, 508-522 (2016).
    • (2016) Nat. Rev. Microbiol , vol.14 , pp. 508-522
    • Wang, J.1    Jia, H.2
  • 33
    • 84867074831 scopus 로고    scopus 로고
    • A metagenome-wide association study of gut microbiota in type 2 diabetes
    • Qin, J. et al. A metagenome-wide association study of gut microbiota in type 2 diabetes. Nature 490, 55-60 (2012).
    • (2012) Nature , vol.490 , pp. 55-60
    • Qin, J.1
  • 34
    • 72949107142 scopus 로고    scopus 로고
    • Introducing mothur: Open-source, platform-independent, community-supported software for describing and comparing microbial communities
    • Schloss, P. D. et al. Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl. Environ. Microbiol. 75, 7537-7541 (2009).
    • (2009) Appl. Environ. Microbiol , vol.75 , pp. 7537-7541
    • Schloss, P.D.1
  • 35
    • 77952243141 scopus 로고    scopus 로고
    • QIIME allows analysis of high-throughput community sequencing data
    • Caporaso, J. G. et al. QIIME allows analysis of high-throughput community sequencing data. Nat. Methods 7, 335-336 (2010).
    • (2010) Nat. Methods , vol.7 , pp. 335-336
    • Caporaso, J.G.1
  • 36
    • 0031284508 scopus 로고    scopus 로고
    • Species assemblages and indicator species: The need for a flexible asymmetrical approach
    • Dufre?ne, M. & Legendre, P. Species assemblages and indicator species:the need for a flexible asymmetrical approach. Ecol. Monogr. 67, 345-366 (1997).
    • (1997) Ecol. Monogr , vol.67 , pp. 345-366
    • Dufrene, M.1    Legendre, P.2
  • 37
    • 0002154022 scopus 로고    scopus 로고
    • A new method for non-parametric multivariate analysis of variance
    • Anderson, M. J. A new method for non-parametric multivariate analysis of variance. Aust. Ecol. 26, 32-46 (2001).
    • (2001) Aust. Ecol , vol.26 , pp. 32-46
    • Anderson, M.J.1
  • 38
    • 84924690678 scopus 로고    scopus 로고
    • Gut microbiome development along the colorectal adenoma-carcinoma sequence
    • Feng, Q. et al. Gut microbiome development along the colorectal adenoma-carcinoma sequence. Nat. Commun. 6, 6528 (2015).
    • (2015) Nat. Commun , vol.6 , pp. 6528
    • Feng, Q.1
  • 39
    • 33845900991 scopus 로고    scopus 로고
    • Multivariate regression analysis of distance matrices for testing associations between gene expression patterns and related variables
    • Zapala, M. A. & Schork, N. J. Multivariate regression analysis of distance matrices for testing associations between gene expression patterns and related variables. Proc. Natl Acad. Sci. USA 103, 19430-19435 (2006).
    • (2006) Proc. Natl Acad. Sci. USA , vol.103 , pp. 19430-19435
    • Zapala, M.A.1    Schork, N.J.2
  • 40
    • 84903134830 scopus 로고    scopus 로고
    • Persistent gut microbiota immaturity in malnourished Bangladeshi children
    • Subramanian, S. et al. Persistent gut microbiota immaturity in malnourished Bangladeshi children. Nature 509, 417-421 (2014).
    • (2014) Nature , vol.509 , pp. 417-421
    • Subramanian, S.1
  • 41
    • 84938817346 scopus 로고    scopus 로고
    • The oral and gut microbiomes are perturbed in rheumatoid arthritis and partly normalized after treatment
    • Zhang, X. et al. The oral and gut microbiomes are perturbed in rheumatoid arthritis and partly normalized after treatment. Nat. Med. 21, 895-905 (2015).
    • (2015) Nat. Med , vol.21 , pp. 895-905
    • Zhang, X.1
  • 42
    • 84884127512 scopus 로고    scopus 로고
    • Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences
    • Langille, M. G. I. et al. Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences. Nat. Biotechnol. 31, 814-821 (2013).
    • (2013) Nat. Biotechnol , vol.31 , pp. 814-821
    • Langille, M.G.I.1
  • 43
    • 14544268137 scopus 로고    scopus 로고
    • Uncovering transcriptional regulation of metabolism by using metabolic network topology
    • Patil, K. R. & Nielsen, J. Uncovering transcriptional regulation of metabolism by using metabolic network topology. Proc. Natl Acad. Sci. USA 102, 2685-2689 (2005).
    • (2005) Proc. Natl Acad. Sci. USA , vol.102 , pp. 2685-2689
    • Patil, K.R.1    Nielsen, J.2
  • 44
    • 38949192019 scopus 로고    scopus 로고
    • Quantitative determination by real-time PCR of four vaginal Lactobacillus species, Gardnerella vaginalis and Atopobium vaginae indicates an inverse relationship between L
    • De Backer, E. et al. Quantitative determination by real-time PCR of four vaginal Lactobacillus species, Gardnerella vaginalis and Atopobium vaginae indicates an inverse relationship between L. gasseri and L. iners. BMC Microbiol. 7, 115 (2007).
    • (2007) Gasseri and L. Iners. BMC Microbiol , vol.7 , pp. 115
    • De Backer, E.1
  • 45
    • 84943328600 scopus 로고    scopus 로고
    • Exploitation of the medfly gut microbiota for the enhancement of sterile insect technique: Use of Enterobacter sp in larval diet-based probiotic applications
    • Augustinos, A. A. et al. Exploitation of the medfly gut microbiota for the enhancement of sterile insect technique: Use of Enterobacter sp. in larval diet-based probiotic applications. PLoS ONE 10, 1-17 (2015).
    • (2015) PLoS ONE , vol.10 , pp. 1-17
    • Augustinos, A.A.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.