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Volumn 1666, Issue , 2017, Pages 505-525

The analysis of ethnic mixtures

Author keywords

Admixture mapping; Ancestry information marker (AIM); Hidden Markov model; Population admixture

Indexed keywords

ADMIXTURE MAPPING; AFRICAN AMERICAN; CHROMOSOME; DISEASE PREDISPOSITION; ETHNICITY; GENE FREQUENCY; GENE LINKAGE DISEQUILIBRIUM; GENE MAPPING; GENETIC DISTANCE; GENOTYPE; HUMAN; MATHEMATICAL MODEL; BIOLOGICAL MODEL; CAUCASIAN; CHROMOSOMAL MAPPING; GENE LOCUS; GENETIC ASSOCIATION STUDY; GENETIC PREDISPOSITION; GENETICS; MARKOV CHAIN; POPULATION GENETICS; PROCEDURES; SINGLE NUCLEOTIDE POLYMORPHISM;

EID: 85030669978     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-4939-7274-6_25     Document Type: Chapter
Times cited : (2)

References (42)
  • 1
    • 0011726836 scopus 로고
    • Mapping genes for complex disease using association studies with recently admixed populations
    • Risch NJ (1992) Mapping genes for complex disease using association studies with recently admixed populations. Am J Hum Genet 51:13
    • (1992) Am J Hum Genet , vol.51 , pp. 13
    • Risch, N.J.1
  • 2
    • 0032231748 scopus 로고    scopus 로고
    • Mapping genes that underlie ethnic differences in disease risk: Methods for detecting linkage in admixed populations, by conditioning on parental admixture
    • McKeigue PM (1998) Mapping genes that underlie ethnic differences in disease risk: methods for detecting linkage in admixed populations, by conditioning on parental admixture. Am J Hum Genet 63:241-251
    • (1998) Am J Hum Genet , vol.63 , pp. 241-251
    • Mc Keigue, P.M.1
  • 3
    • 2442688965 scopus 로고    scopus 로고
    • Linkage analysis of a complex disease through use of admixed populations
    • Zhu X, Cooper RS, Elston RC (2004) Linkage analysis of a complex disease through use of admixed populations. Am J Hum Genet 74:1136-1153
    • (2004) Am J Hum Genet , vol.74 , pp. 1136-1153
    • Zhu, X.1    Cooper, R.S.2    Elston, R.C.3
  • 4
    • 33748749705 scopus 로고    scopus 로고
    • A classical likelihood based approach for admixture mapping using em algorithm
    • Zhu X, Zhang S, Tang H, Cooper R (2006) A classical likelihood based approach for admixture mapping using EM algorithm. Hum Genet 120:431-445
    • (2006) Hum Genet , vol.120 , pp. 431-445
    • Zhu, X.1    Zhang, S.2    Tang, H.3    Cooper, R.4
  • 7
    • 6344244729 scopus 로고    scopus 로고
    • Statistical tests for admixture mapping with case-control and cases-only data
    • Montana G, Pritchard JK (2004) Statistical tests for admixture mapping with case-control and cases-only data. Am J Hum Genet 75:771-789
    • (2004) Am J Hum Genet , vol.75 , pp. 771-789
    • Montana, G.1    Pritchard, J.K.2
  • 8
    • 7444241441 scopus 로고    scopus 로고
    • A hidden markov modeling approach for admixture mapping based on case-control data
    • Zhang C, Chen K, Seldin MF, Li H (2004) A hidden Markov modeling approach for admixture mapping based on case-control data. Genet Epidemiol 27:225-239
    • (2004) Genet Epidemiol , vol.27 , pp. 225-239
    • Zhang, C.1    Chen, K.2    Seldin, M.F.3    Li, H.4
  • 9
    • 40749112276 scopus 로고    scopus 로고
    • Admixture mapping and the role of population structure for localizing disease genes
    • Zhu X, Tang H, Risch N (2008) Admixture mapping and the role of population structure for localizing disease genes. Adv Genet 60:547-569
    • (2008) Adv Genet , vol.60 , pp. 547-569
    • Zhu, X.1    Tang, H.2    Risch, N.3
  • 10
    • 33750607471 scopus 로고    scopus 로고
    • Analytical correction for multiple testing in admixture mapping
    • Sha Q, Zhang X, Zhu X, Zhang S (2006) Analytical correction for multiple testing in admixture mapping. Hum Hered 62:55-63
    • (2006) Hum Hered , vol.62 , pp. 55-63
    • Sha, Q.1    Zhang, X.2    Zhu, X.3    Zhang, S.4
  • 11
    • 0036668723 scopus 로고    scopus 로고
    • Association mapping, using a mixture model for complex traits
    • Zhu X, Zhang S, Zhao H, Cooper RS (2002) Association mapping, using a mixture model for complex traits. Genet Epidemiol 23 (2):181-196
    • (2002) Genet Epidemiol , vol.23 , Issue.2 , pp. 181-196
    • Zhu, X.1    Zhang, S.2    Zhao, H.3    Cooper, R.S.4
  • 12
    • 67650472821 scopus 로고    scopus 로고
    • Admixture mapping of quantitative trait loci for bmi in african americans: Evidence for loci on chromosomes 3q, 5q, and 15q
    • Basu A, Tang H, Arnett D, CC G, Mosley T et al (2009) Admixture mapping of quantitative trait loci for BMI in African Americans: evidence for loci on chromosomes 3q, 5q, and 15q. Obesity (Silver Spring) 17:1226-1231
    • (2009) Obesity (Silver Spring) , vol.17 , pp. 1226-1231
    • Basu, A.1    Tang, H.2    Arnett, D.3    Cc, G.4    Mosley, T.5
  • 13
    • 79955989635 scopus 로고    scopus 로고
    • Combined admixture mapping and association analysis identifies a novel blood pressure genetic locus on 5p13: Contributions from the care consortium
    • Zhu X, Young JH, Fox E, Keating BJ, Fran-ceschini N, Kang S, Tayo B, Adeyemo A, Sun YV, Li Y et al (2011) Combined admixture mapping and association analysis identifies a novel blood pressure genetic locus on 5p13: contributions from the CARe consortium. Hum Mol Genet 20(11):2285-2295
    • (2011) Hum Mol Genet , vol.20 , Issue.11 , pp. 2285-2295
    • Zhu, X.1    Young, J.H.2    Fox, E.3    Keating, B.J.4    Fran-Ceschini, N.5    Kang, S.6    Tayo, B.7    Adeyemo, A.8    Sun, Y.V.9    Li, Y.10
  • 14
    • 33745228973 scopus 로고    scopus 로고
    • Reconstructing genetic ancestry blocks in admixed individuals
    • Tang H, Coram M, Wang P, Zhu X, Risch N (2006) Reconstructing genetic ancestry blocks in admixed individuals. Am J Hum Genet 79:1-12
    • (2006) Am J Hum Genet , vol.79 , pp. 1-12
    • Tang, H.1    Coram, M.2    Wang, P.3    Zhu, X.4    Risch, N.5
  • 15
    • 41649089607 scopus 로고    scopus 로고
    • Effect ofgenetic divergence in identifying ancestral origin using hapaa
    • Sundquist A, Fratkin E, Do CB, Batzoglou S (2008) Effect ofgenetic divergence in identifying ancestral origin using HAPAA. Genome Res 18:676-682
    • (2008) Genome Res , vol.18 , pp. 676-682
    • Sundquist, A.1    Fratkin, E.2    Do, C.B.3    Batzoglou, S.4
  • 17
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard JK, Stephens M, Donnelly P (2000) Inference of population structure using multilocus genotype data. Genetics 155:945-959
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 18
    • 0041817568 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data: Linked loci and correlated allele frequencies
    • Falush D, Stephens M, Pritchard JK (2003) Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies. Genetics 164:1567-1587
    • (2003) Genetics , vol.164 , pp. 1567-1587
    • Falush, D.1    Stephens, M.2    Pritchard, J.K.3
  • 19
    • 0026030165 scopus 로고
    • The genetic structure of admixed populations
    • Long JC (1991) The genetic structure of admixed populations. Genetics 127 (2):417-428
    • (1991) Genetics , vol.127 , Issue.2 , pp. 417-428
    • Long, J.C.1
  • 20
    • 33746512512 scopus 로고    scopus 로고
    • Principal components analysis corrects for stratification in genome-wide association studies
    • Price AL, Patterson NJ, Plenge RM, Weinblatt ME, Shadick NA et al (2006) Principal components analysis corrects for stratification in genome-wide association studies. Nat Genet 38:904-909
    • (2006) Nat Genet , vol.38 , pp. 904-909
    • Price, A.L.1    Patterson, N.J.2    Plenge, R.M.3    Weinblatt, M.E.4    Shadick, N.A.5
  • 24
    • 66349088624 scopus 로고    scopus 로고
    • Inference of locus-specific ancestry in closely related populations
    • Pasaniuc B, Sankararaman S, Kimmel G, Hal-perin E (2009) Inference of locus-specific ancestry in closely related populations. Bioinformatics 25(12):i213-i221
    • (2009) Bioinformatics , vol.25 , Issue.12 , pp. i213-i221
    • Pasaniuc, B.1    Sankararaman, S.2    Kimmel, G.3    Hal-Perin, E.4
  • 25
    • 84872074517 scopus 로고    scopus 로고
    • Pcad-mix: Principal components-based assignment of ancestry along each chromosome in individuals with admixed ancestry from two or more populations
    • Brisbin A, Bryc K, Byrnes J, Zakharia F, Omberg L, Degenhardt J, Reynolds A, Ostrer H, Mezey JG, Bustamante CD (2012) PCAd-mix: principal components-based assignment of ancestry along each chromosome in individuals with admixed ancestry from two or more populations. Hum Biol 84(4):343-364
    • (2012) Hum Biol , vol.84 , Issue.4 , pp. 343-364
    • Brisbin, A.1    Bryc, K.2    Byrnes, J.3    Zakharia, F.4    Omberg, L.5    Degenhardt, J.6    Reynolds, A.7    Ostrer, H.8    Mezey, J.G.9    Bustamante, C.D.10
  • 27
    • 77957739612 scopus 로고    scopus 로고
    • Molecular basis of a linkage peak: Exome sequencing and family-based analysis identify a rare genetic variant in the adipoq gene in the iras family study
    • Bowden DW, An SS, Palmer ND, Brown WM, Norris JM, Haffner SM, Hawkins GA, Guo X, Rotter JI, Chen YD et al (2010) Molecular basis of a linkage peak: exome sequencing and family-based analysis identify a rare genetic variant in the ADIPOQ gene in the IRAS Family Study. Hum Mol Genet 19(20):4112-4120
    • (2010) Hum Mol Genet , vol.19 , Issue.20 , pp. 4112-4120
    • Bowden, D.W.1    An, S.S.2    Palmer, N.D.3    Brown, W.M.4    Norris, J.M.5    Haffner, S.M.6    Hawkins, G.A.7    Guo, X.8    Rotter, J.I.9    Chen, Y.D.10
  • 28
    • 76649122154 scopus 로고    scopus 로고
    • Detecting rare variants for complex traits using family and unrelated data
    • Zhu X, Feng T, Li Y, Lu Q, Elston RC (2010) Detecting rare variants for complex traits using family and unrelated data. Genet Epidemiol 34 (2):171-187
    • (2010) Genet Epidemiol , vol.34 , Issue.2 , pp. 171-187
    • Zhu, X.1    Feng, T.2    Li, Y.3    Lu, Q.4    Elston, R.C.5
  • 29
    • 85018193096 scopus 로고    scopus 로고
    • De novo mutations discovered in 8 mexican american families through whole genome sequencing
    • Genetic Analysis Workshop 18 Vanessa Olmo
    • Wang H, Zhu X (2014) De novo mutations discovered in 8 Mexican American families through whole genome sequencing. BMC Proc 8(Suppl 1 Genetic Analysis Workshop 18 Vanessa Olmo):S24
    • (2014) BMC Proc , vol.8
    • Wang, H.1    Zhu, X.2
  • 30
    • 84863970074 scopus 로고    scopus 로고
    • De novo mutations in human genetic disease
    • De novo mutations in human genetic disease. Nat Rev Genet 13(8):565-575
    • (2012) Nat Rev Genet , vol.13 , Issue.8 , pp. 565-575
    • Veltman, J.A.1    Brunner, H.G.2
  • 35
    • 34548292504 scopus 로고    scopus 로고
    • Plink: A tool set for whole-genome association and population-based linkage analyses
    • Purcell S, Neale B, Todd-Brown K, Thomas L, Ferreira MA et al (2007) PLINK: a tool set for whole-genome association and population-based linkage analyses. Am J Hum Genet 81:559-575
    • (2007) Am J Hum Genet , vol.81 , pp. 559-575
    • Purcell, S.1    Neale, B.2    Todd-Brown, K.3    Thomas, L.4    Ferreira, M.A.5
  • 37
    • 44249128395 scopus 로고    scopus 로고
    • Admixture mapping provides evidence of association of the vnn1 gene with hypertension
    • Zhu X, Cooper RS (2007) Admixture mapping provides evidence of association of the VNN1 gene with hypertension. PLoS ONE 2:e1244
    • (2007) Plos ONE , vol.2
    • Zhu, X.1    Cooper, R.S.2
  • 40
    • 0032714352 scopus 로고    scopus 로고
    • Genomic control for association studies
    • Devlin B, Roeder K(1999) Genomic control for association studies. Biometrics 55:997-1004
    • (1999) Biometrics , vol.55 , pp. 997-1004
    • Devlin, B.1    Roeder, K.2
  • 41
    • 85027956263 scopus 로고    scopus 로고
    • Power comparison of admixture mapping and direct association analysis in genome-wide association studies
    • Qin H, Zhu X (2012) Power comparison of admixture mapping and direct association analysis in genome-wide association studies. Genet Epidemiol 36:235-243
    • (2012) Genet Epidemiol , vol.36 , pp. 235-243
    • Qin, H.1    Zhu, X.2
  • 42
    • 30744434862 scopus 로고    scopus 로고
    • Adjusting multiple testing in multilocus analyses using the eigenvalues of a correlation matrix
    • Li J, Ji L (2005) Adjusting multiple testing in multilocus analyses using the eigenvalues of a correlation matrix. Heredity 95:221-227
    • (2005) Heredity , vol.95 , pp. 221-227
    • Li, J.1    Ji, L.2


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