PhyD3: A phylogenetic tree viewer with extended phyloXML support for functional genomics data visualization

Bioinformatics

Volumn 33, Issue 18, 2017, Pages 2946-2947

  Kreft, Lukasz ^a   Botzki, Alexander ^a   Coppens, Frederik ^b,c   Vandepoele, Klaas ^b,c   Van Bel, Michiel ^b,c  

^a DEPARTMENT OF PLANT SYSTEMS BIOLOGY   (Belgium)

^b GHENT UNIVERSITY   (Belgium)

^c Department of Biotechnology and Bioinformatics   (Belgium)

Author keywords

[No Author keywords available]

Indexed keywords

DNA SEQUENCE; GENOMICS; INTERNET; PHYLOGENY; PROCEDURES; SOFTWARE;

GENOMICS; INTERNET; PHYLOGENY; SEQUENCE ANALYSIS, DNA; SOFTWARE;

EID: 85029782883     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btx324     Document Type: Article

References (5)

1. Han,M.V. and Zmasek,C.M. (2009) phyloXML: XML for evolutionary biology and comparative genomics. BMC Bioinformatics, 10, 356.
2. He,Z. et al. (2016) Evolview v2: an online visualization and management tool for customized and annotated phylogenetic trees. Nucleic Acids Res., 44, W236-W241.
3. Kuraku,S. et al. (2013) aLeaves facilitates on-demand exploration of metazoan gene family trees on MAFFT sequence alignment server with enhanced interactivity. Nucleic Acids Res., 41, W22-W28.
4. Letunic,I. and Bork,P. (2016) Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees. Nucleic Acids Res., 44, W242-W245.
5. Smits,S.A. et al. (2010) jsPhyloSVG: a javascript library for visualizing interactive and vector-based phylogenetic trees on the web. Plos One, 5, e12267.