메뉴 건너뛰기




Volumn 65, Issue 1, 2018, Pages 114-123

Genetic analysis of human and swine influenza A viruses isolated in Northern Italy during 2010–2015

Author keywords

human; influenza A virus; swine

Indexed keywords

ANIMAL CELL; ARTICLE; GENETIC ANALYSIS; GENOTYPE; HUMAN; INFLUENZA A VIRUS (H1N1); INFLUENZA A VIRUS (H1N2); INFLUENZA A VIRUS (H3N2); INFLUENZA VIRUS; ITALY; NONHUMAN; NUCLEOTIDE SEQUENCE; PANDEMIC; PHYLOGENETIC TREE; PIG; PRIORITY JOURNAL; SWINE INFLUENZA VIRUS; VIRUS ISOLATION; VIRUS STRAIN; ANIMAL; GENETIC REASSORTMENT; GENETIC VARIATION; GENETICS; INFLUENZA; INFLUENZA A VIRUS; ISOLATION AND PURIFICATION; ORTHOMYXOVIRUS INFECTION; PHYLOGENY; SWINE DISEASE; VETERINARY; VIROLOGY; VIRUS GENOME;

EID: 85028747993     PISSN: 18631959     EISSN: 18632378     Source Type: Journal    
DOI: 10.1111/zph.12378     Document Type: Article
Times cited : (20)

References (46)
  • 1
    • 85030127224 scopus 로고    scopus 로고
    • A phylogeny-based global nomenclature system and automated annotation tool for H1 hemagglutinin genes from swine influenza A viruses
    • 1, De
    • Anderson, T. K., Macken, C. A., Lewis, N. S., Scheuermann, R. H., Van Reeth, K., Brown, I. H., Swenson, S. L., … Vincent, A. L. (2016). A phylogeny-based global nomenclature system and automated annotation tool for H1 hemagglutinin genes from swine influenza A viruses. mSphere, 1, Dec, 1, 1–6.
    • (2016) mSphere , vol.1 , pp. 1-6
    • Anderson, T.K.1    Macken, C.A.2    Lewis, N.S.3    Scheuermann, R.H.4    Van Reeth, K.5    Brown, I.H.6    Swenson, S.L.7    Vincent, A.L.8
  • 4
    • 84893116267 scopus 로고    scopus 로고
    • History and epidemiology of swine influenza in Europe
    • Brown, I. H. (2013). History and epidemiology of swine influenza in Europe. Current Topics in Microbiology and Immunology, 370, 133–146.
    • (2013) Current Topics in Microbiology and Immunology , vol.370 , pp. 133-146
    • Brown, I.H.1
  • 6
    • 84863854666 scopus 로고    scopus 로고
    • Multiplex RT-PCR assay for differentiating European swine influenza virus subtypes H1N1, H1N2 and H3N2
    • Chiapponi, C., Moreno, A., Barbieri, I., Merenda, M., & Foni, E. (2012). Multiplex RT-PCR assay for differentiating European swine influenza virus subtypes H1N1, H1N2 and H3N2. Journal of Virological Methods, 184, 117–120.
    • (2012) Journal of Virological Methods , vol.184 , pp. 117-120
    • Chiapponi, C.1    Moreno, A.2    Barbieri, I.3    Merenda, M.4    Foni, E.5
  • 7
    • 70649100028 scopus 로고    scopus 로고
    • Comparison of the usefulness of the CACO-2 cell line with standard substrates for isolation of swine influenza A viruses
    • Chiapponi, C., Zanni, I., Garbarino, C., Barigazzi, G., & Foni, E. (2010). Comparison of the usefulness of the CACO-2 cell line with standard substrates for isolation of swine influenza A viruses. Journal of Virological Methods, 163, 162–165.
    • (2010) Journal of Virological Methods , vol.163 , pp. 162-165
    • Chiapponi, C.1    Zanni, I.2    Garbarino, C.3    Barigazzi, G.4    Foni, E.5
  • 8
    • 17744381574 scopus 로고    scopus 로고
    • Bayesian coalescent inference of past population dynamics from molecular sequences
    • Drummond, A. J., Rambaut, A., Shapiro, B., & Pybus, O. G. (2005). Bayesian coalescent inference of past population dynamics from molecular sequences. Molecular Biology and Evolution, 22, 1185–1192.
    • (2005) Molecular Biology and Evolution , vol.22 , pp. 1185-1192
    • Drummond, A.J.1    Rambaut, A.2    Shapiro, B.3    Pybus, O.G.4
  • 10
    • 77955653801 scopus 로고    scopus 로고
    • Comparison of selection pressures on the HA gene of pandemic (2009) and seasonal human and swine influenza A H1 subtype viruses
    • Furuse, Y., Shimabukuro, K., Odagiri, T., Sawayama, R., Okada, T., Khandaker, I., … Oshitani, H. (2010). Comparison of selection pressures on the HA gene of pandemic (2009) and seasonal human and swine influenza A H1 subtype viruses. Virology, 405, 314–321.
    • (2010) Virology , vol.405 , pp. 314-321
    • Furuse, Y.1    Shimabukuro, K.2    Odagiri, T.3    Sawayama, R.4    Okada, T.5    Khandaker, I.6    Oshitani, H.7
  • 13
    • 68049136137 scopus 로고    scopus 로고
    • Genetic and antigenic evolution of swine influenza viruses in Europe and evaluation of their zoonotic potential
    • Kuntz-Simon, G., & Madec, F. (2009). Genetic and antigenic evolution of swine influenza viruses in Europe and evaluation of their zoonotic potential. Zoonoses Public Health, 56, 310–325.
    • (2009) Zoonoses Public Health , vol.56 , pp. 310-325
    • Kuntz-Simon, G.1    Madec, F.2
  • 14
    • 84888044401 scopus 로고    scopus 로고
    • Reassortants of the pandemic (H1N1) 2009 virus and establishment of a novel porcine H1N2 influenza virus, lineage in Germany
    • Lange, J., Groth, M., Schlegel, M., Krumbholz, A., Wieczorek, K., Ulrich, R., … Durrwald, R. (2013). Reassortants of the pandemic (H1N1) 2009 virus and establishment of a novel porcine H1N2 influenza virus, lineage in Germany. Veterinary Microbiology, 167, 345–356.
    • (2013) Veterinary Microbiology , vol.167 , pp. 345-356
    • Lange, J.1    Groth, M.2    Schlegel, M.3    Krumbholz, A.4    Wieczorek, K.5    Ulrich, R.6    Durrwald, R.7
  • 15
    • 71549155625 scopus 로고    scopus 로고
    • Switching gears for an influenza pandemic: Validation of a duplex reverse transcriptase PCR assay for simultaneous detection and confirmatory identification of pandemic (H1N1) 2009 influenza virus
    • LeBlanc, J. J., Li, Y., Bastien, N., Forward, K. R., Davidson, R. J., & Hatchette, T. F. (2009). Switching gears for an influenza pandemic: Validation of a duplex reverse transcriptase PCR assay for simultaneous detection and confirmatory identification of pandemic (H1N1) 2009 influenza virus. Journal of Clinical Microbiology, 47, 3805–3813.
    • (2009) Journal of Clinical Microbiology , vol.47 , pp. 3805-3813
    • LeBlanc, J.J.1    Li, Y.2    Bastien, N.3    Forward, K.R.4    Davidson, R.J.5    Hatchette, T.F.6
  • 17
    • 84906335973 scopus 로고    scopus 로고
    • Expansion of genotypic diversity and establishment of 2009 H1N1 pandemic-origin internal genes in pigs in China
    • Liang, H., Lam, T. T., Fan, X., Chen, X., Zeng, Y., Zhou, J., … Zhu, H. (2014). Expansion of genotypic diversity and establishment of 2009 H1N1 pandemic-origin internal genes in pigs in China. Journal of Virology, 88, 10864–10874.
    • (2014) Journal of Virology , vol.88 , pp. 10864-10874
    • Liang, H.1    Lam, T.T.2    Fan, X.3    Chen, X.4    Zeng, Y.5    Zhou, J.6    Zhu, H.7
  • 18
    • 84979285077 scopus 로고    scopus 로고
    • European decision-maker perspective with regard to influenza prevention policies
    • Lopalco, P. L. (2016). European decision-maker perspective with regard to influenza prevention policies. Journal of Preventive Medicine and Hygiene, 57, E5–E8.
    • (2016) Journal of Preventive Medicine and Hygiene , vol.57 , pp. E5-E8
    • Lopalco, P.L.1
  • 19
    • 84867518731 scopus 로고    scopus 로고
    • Estimating reassortment rates in co-circulating Eurasian swine influenza viruses
    • Lycett, S. J., Baillie, G., Coulter, E., Bhatt, S., Kellam, P., McCauley, J. W., … Combating Swine Influenza Initiative-COSI Consortium (2012). Estimating reassortment rates in co-circulating Eurasian swine influenza viruses. Journal of General Virology, 93, 2326–2336.
    • (2012) Journal of General Virology , vol.93 , pp. 2326-2336
    • Lycett, S.J.1    Baillie, G.2    Coulter, E.3    Bhatt, S.4    Kellam, P.5    McCauley, J.W.6
  • 20
    • 84875985517 scopus 로고    scopus 로고
    • Pandemic influenza A viruses escape from restriction by human MxA through adaptive mutations in the nucleoprotein
    • Manz, B., Dornfeld, D., Gotz, V., Zell, R., Zimmermann, P., Haller, O., … Schwemmle, M. (2013). Pandemic influenza A viruses escape from restriction by human MxA through adaptive mutations in the nucleoprotein. PLoS Pathogens, 9, e1003279.
    • (2013) PLoS Pathogens , vol.9
    • Manz, B.1    Dornfeld, D.2    Gotz, V.3    Zell, R.4    Zimmermann, P.5    Haller, O.6    Schwemmle, M.7
  • 24
    • 85040682078 scopus 로고    scopus 로고
    • Retrieved from, on May 18, 2017)
    • Ministero della Salute (2016). Vaccinazione antinfluenzale - Coperture vaccinali medie. Retrieved from http://www.salute.gov.it/portale/documentazione/p6_2_8_3_1.jsp?lingua=italiano&26id=19(Accessed on May 18, 2017).
    • (2016) Vaccinazione antinfluenzale - Coperture vaccinali medie
  • 27
    • 84888318065 scopus 로고    scopus 로고
    • Different evolutionary trends of swine H1N2 influenza viruses in Italy compared to European viruses
    • Moreno, A., Gabanelli, E., Sozzi, E., Lelli, D., Chiapponi, C., Ciccozzi, M., … Cordioli, P. (2013). Different evolutionary trends of swine H1N2 influenza viruses in Italy compared to European viruses. Veterinary Research, 44, 112–126.
    • (2013) Veterinary Research , vol.44 , pp. 112-126
    • Moreno, A.1    Gabanelli, E.2    Sozzi, E.3    Lelli, D.4    Chiapponi, C.5    Ciccozzi, M.6    Cordioli, P.7
  • 28
    • 84958580744 scopus 로고    scopus 로고
    • Novel human-like influenza A viruses circulate in swine in Mexico and Chile
    • Nelson, M., Culhane, M. R., Rovira, A., Torremorell, M., Guerrero, P., & Norambuena, J. (2015). Novel human-like influenza A viruses circulate in swine in Mexico and Chile. PLoS Currents, 7. https://doi.org/10.1371/currents.outbreaks.c8b3207c9bad98474eca3013fa933ca6
    • (2015) PLoS Currents , vol.7
    • Nelson, M.1    Culhane, M.R.2    Rovira, A.3    Torremorell, M.4    Guerrero, P.5    Norambuena, J.6
  • 31
    • 84929591014 scopus 로고    scopus 로고
    • Continual reintroduction of human pandemic H1N1 influenza A viruses into swine in the United States, 2009 to 2014
    • Nelson, M. I., Stratton, J., Killian, M. L., Janas-Martindale, A., & Vincent, A. L. (2015). Continual reintroduction of human pandemic H1N1 influenza A viruses into swine in the United States, 2009 to 2014. Journal of Virology, 89, 6218–6226.
    • (2015) Journal of Virology , vol.89 , pp. 6218-6226
    • Nelson, M.I.1    Stratton, J.2    Killian, M.L.3    Janas-Martindale, A.4    Vincent, A.L.5
  • 32
  • 34
    • 33750933903 scopus 로고    scopus 로고
    • Swine influenza
    • In, J. J. Zimmerman, S. D'Allaire, #x0026;, D. J. Taylor, (Eds.),, Ames, IA, Iowa State University Pres
    • Olsen, C. W., Brown, I. H., Easterday, B. C., & Van Reeth, K. (2006). Swine influenza. In J. J. Zimmerman, S. D'Allaire, & D. J. Taylor (Eds.), Diseases of swine (pp. 469–482). Ames, IA: Iowa State University Press.
    • (2006) Diseases of swine , pp. 469-482
    • Olsen, C.W.1    Brown, I.H.2    Easterday, B.C.3    Van Reeth, K.4
  • 36
    • 45849154165 scopus 로고    scopus 로고
    • jModelTest: Phylogenetic model averaging
    • Posada, D. (2008). jModelTest: Phylogenetic model averaging. Molecular Biology and Evolution, 25, 1253–1256.
    • (2008) Molecular Biology and Evolution , vol.25 , pp. 1253-1256
    • Posada, D.1
  • 37
    • 84919897842 scopus 로고    scopus 로고
    • European surveillance network for influenza in pigs: Surveillance programs, diagnostic tools and swine influenza virus subtypes identified in 14 European countries from 2010 to 2013
    • Simon, G., Larsen, L. E., Durrwald, R., Foni, E., Harder, T., Van Reeth, K., … Loeffen, W. (2014). European surveillance network for influenza in pigs: Surveillance programs, diagnostic tools and swine influenza virus subtypes identified in 14 European countries from 2010 to 2013. PLoS One, 9, e115815.
    • (2014) PLoS One , vol.9
    • Simon, G.1    Larsen, L.E.2    Durrwald, R.3    Foni, E.4    Harder, T.5    Van Reeth, K.6    Loeffen, W.7
  • 39
    • 0034983646 scopus 로고    scopus 로고
    • Bayesian selection of continuous-time Markov chain evolutionary models
    • Suchard, M. A., Weiss, R. E., & Sinsheimer, J. S. (2001). Bayesian selection of continuous-time Markov chain evolutionary models. Molecular Biology and Evolution, 18, 1001–1013.
    • (2001) Molecular Biology and Evolution , vol.18 , pp. 1001-1013
    • Suchard, M.A.1    Weiss, R.E.2    Sinsheimer, J.S.3
  • 40
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M., & Kumar, S. (2011). MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution, 28, 2731–2739.
    • (2011) Molecular Biology and Evolution , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 42
    • 84940991966 scopus 로고    scopus 로고
    • Molecular epidemiology and evolution of influenza viruses circulating within European swine between 2009 and 2013
    • Watson, S. J., Langat, P., Reid, S. M., Lam, T. T., Cotten, M., Kelly, M., … Kellam, P. (2015). Molecular epidemiology and evolution of influenza viruses circulating within European swine between 2009 and 2013. Journal of Virology, 89, 9920–9931.
    • (2015) Journal of Virology , vol.89 , pp. 9920-9931
    • Watson, S.J.1    Langat, P.2    Reid, S.M.3    Lam, T.T.4    Cotten, M.5    Kelly, M.6    Kellam, P.7
  • 45
    • 84893059551 scopus 로고    scopus 로고
    • Genetics, evolution, and the zoonotic capacity of European swine influenza viruses
    • Zell, R., Scholtissek, C., & Ludwig, S. (2013). Genetics, evolution, and the zoonotic capacity of European swine influenza viruses. Current Topics in Microbiology and Immunology, 370, 29–55.
    • (2013) Current Topics in Microbiology and Immunology , vol.370 , pp. 29-55
    • Zell, R.1    Scholtissek, C.2    Ludwig, S.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.