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Volumn 93, Issue 3, 2017, Pages

Reconstructing metabolic pathways of a member of the genus Pelotomaculum suggesting its potential to oxidize benzene to carbon dioxide with direct reduction of sulfate

Author keywords

anaerobic degradation; benzene; genome; Pelotomaculum; proteome; sulfate reduction

Indexed keywords

ACYL COENZYME A; BENZENE; BENZOYL-COENZYME A; BENZOYL-COENZYME A REDUCTASE (DEAROMATIZING); CARBON DIOXIDE; OXIDOREDUCTASE; PROTEOME; SULFATE;

EID: 85027961332     PISSN: 01686496     EISSN: 15746941     Source Type: Journal    
DOI: 10.1093/femsec/fiw254     Document Type: Article
Times cited : (26)

References (57)
  • 1
    • 65549142775 scopus 로고    scopus 로고
    • Anaerobic benzene degradation by Gram-positive sulfate-reducing bacteria
    • Abu Laban N, Selesi D, Jobelius C et al. Anaerobic benzene degradation by Gram-positive sulfate-reducing bacteria. FEMS Microbiol Ecol 2009;68:300?11.
    • (2009) FEMS Microbiol Ecol , vol.68 , pp. 300-311
    • Abu Laban, N1    Selesi, D2    Jobelius, C3
  • 2
    • 77957307056 scopus 로고    scopus 로고
    • Identification of enzymes involved in anaerobic benzene degradation by a strictly anaerobic iron-reducing enrichment culture
    • Abu Laban N, Selesi D, Rattei T et al. Identification of enzymes involved in anaerobic benzene degradation by a strictly anaerobic iron-reducing enrichment culture. Environ Microbiol 2010;12:2783?96.
    • (2010) Environ Microbiol , vol.12 , pp. 2783-2796
    • Abu Laban, N1    Selesi, D2    Rattei, T3
  • 3
    • 84938959902 scopus 로고    scopus 로고
    • Microorganisms involved in anaerobic benzene degradation
    • Aburto-Medina A, Ball AS. Microorganisms involved in anaerobic benzene degradation. Ann Microbiol 2014;65:1201?13.
    • (2014) Ann Microbiol , vol.65 , pp. 1201-1213
    • Aburto-Medina, A1    Ball, AS.2
  • 4
    • 84871712835 scopus 로고    scopus 로고
    • Energy conservation via electron bifurcating ferredoxin reduction and proton/Na+ translocating ferredoxin oxidation
    • Buckel W, Thauer RK. Energy conservation via electron bifurcating ferredoxin reduction and proton/Na+ translocating ferredoxin oxidation. Biochim Biophys Acta 2013;1827: 94?113.
    • (2013) Biochim Biophys Acta , vol.1827 , pp. 94-113
    • Buckel, W1    Thauer, RK.2
  • 5
    • 0034176389 scopus 로고    scopus 로고
    • Detection of phenol and benzoate as intermediates of anaerobic benzene biodegradation under different terminal electron-accepting conditions
    • Caldwell ME, Suflita JM. Detection of phenol and benzoate as intermediates of anaerobic benzene biodegradation under different terminal electron-accepting conditions. Environ Sci Technol 2000;34:1216?20.
    • (2000) Environ Sci Technol , vol.34 , pp. 1216-1220
    • Caldwell, ME1    Suflita, JM.2
  • 6
    • 84855276971 scopus 로고    scopus 로고
    • The genome sequence of Desulfatibacillum alkenivorans AK-01: a blueprint for anaerobic alkane oxidation
    • Callaghan AV,Morris BE, Pereira IA et al. The genome sequence of Desulfatibacillum alkenivorans AK-01: a blueprint for anaerobic alkane oxidation. Environ Microbiol 2012;14:101?13.
    • (2012) Environ Microbiol , vol.14 , pp. 101-113
    • Callaghan, AV1    Morris, BE2    Pereira, IA3
  • 8
    • 84925243945 scopus 로고    scopus 로고
    • Taxator-tk: precise taxonomic assignment of metagenomes by fast approximation of evolutionary neighborhoods
    • Dr?oge J, Gregor I, McHardy AC. Taxator-tk: precise taxonomic assignment of metagenomes by fast approximation of evolutionary neighborhoods. Bioinformatics 2015;31:817?24.
    • (2015) Bioinformatics , vol.31 , pp. 817-824
    • Dr?oge, J1    Gregor, I2    McHardy, AC.3
  • 9
    • 80054757000 scopus 로고    scopus 로고
    • Microbial degradation of aromatic compounds - from one strategy to four
    • Fuchs G, Boll M, Heider J. Microbial degradation of aromatic compounds - from one strategy to four. Nat Rev Microbiol 2011;9:803?16.
    • (2011) Nat Rev Microbiol , vol.9 , pp. 803-816
    • Fuchs, G1    Boll, M2    Heider, J.3
  • 11
    • 84963969179 scopus 로고    scopus 로고
    • PhyloPythiaS+: a self-training method for the rapid reconstruction of low-ranking taxonomic bins from metagenomes
    • Gregor I, Dr?oge J, Schirmer M et al. PhyloPythiaS+: a self-training method for the rapid reconstruction of low-ranking taxonomic bins from metagenomes. PeerJ 2016;4:e1603.
    • (2016) PeerJ , vol.4 , pp. e1603
    • Gregor, I1    Dr?oge, J2    Schirmer, M3
  • 12
    • 77649104651 scopus 로고    scopus 로고
    • Functional characterization of an anaerobic benzene-degrading enrichment culture by DNA stable isotope probing
    • Herrmann S, Kleinsteuber S, Chatzinotas A et al. Functional characterization of an anaerobic benzene-degrading enrichment culture by DNA stable isotope probing. EnvironMicrobiol 2010;12:401?11.
    • (2010) EnvironMicrobiol , vol.12 , pp. 401-411
    • Herrmann, S1    Kleinsteuber, S2    Chatzinotas, A3
  • 13
    • 80052699368 scopus 로고    scopus 로고
    • Anaerobic oxidation of benzene by the hyperthermophilic archaeon Ferroglobus placidus
    • Holmes DE, Risso C, Smith JA et al. Anaerobic oxidation of benzene by the hyperthermophilic archaeon Ferroglobus placidus. Appl Environ Microb 2011;77:5926?33.
    • (2011) Appl Environ Microb , vol.77 , pp. 5926-5933
    • Holmes, DE1    Risso, C2    Smith, JA3
  • 14
    • 84355166730 scopus 로고    scopus 로고
    • Genome-scale analysis of anaerobic benzoate and phenol metabolism in the hyperthermophilic archaeon Ferroglobus placidus
    • Holmes DE, Risso C, Smith JA et al. Genome-scale analysis of anaerobic benzoate and phenol metabolism in the hyperthermophilic archaeon Ferroglobus placidus. ISME J 2012;6:146?57.
    • (2012) ISME J , vol.6 , pp. 146-157
    • Holmes, DE1    Risso, C2    Smith, JA3
  • 15
    • 0036737613 scopus 로고    scopus 로고
    • Pelotomaculum thermopropionicum gen. nov., sp. nov., an anaerobic, thermophilic, syntrophic propionate-oxidizing bacterium
    • Imachi H, Sekiguchi Y, Kamagata Y et al. Pelotomaculum thermopropionicum gen. nov., sp. nov., an anaerobic, thermophilic, syntrophic propionate-oxidizing bacterium. Int J Syst Evol Micr 2002;52:1729?35.
    • (2002) Int J Syst Evol Micr , vol.52 , pp. 1729-1735
    • Imachi, H1    Sekiguchi, Y2    Kamagata, Y3
  • 16
    • 33644950423 scopus 로고    scopus 로고
    • Non-sulfate-reducing, syntrophic bacteria affiliated with Desulfotomaculum Cluster I are widely distributed in methanogenic environments
    • Imachi H, Sekiguchi Y, Kamagata Y et al. Non-sulfate-reducing, syntrophic bacteria affiliated with Desulfotomaculum Cluster I are widely distributed in methanogenic environments. Appl Environ Microb 2006;72:2080?91.
    • (2006) Appl Environ Microb , vol.72 , pp. 2080-2091
    • Imachi, H1    Sekiguchi, Y2    Kamagata, Y3
  • 17
    • 77957309179 scopus 로고    scopus 로고
    • The genome of the Gram-positive metal- and sulfate-reducing bacterium Desulfotomaculum reducens strain MI-1
    • Junier P, Junier T, Podell S et al. The genome of the Gram-positive metal- and sulfate-reducing bacterium Desulfotomaculum reducens strain MI-1. Environ Microbiol 2010;12:2738?54.
    • (2010) Environ Microbiol , vol.12 , pp. 2738-2754
    • Junier, P1    Junier, T2    Podell, S3
  • 18
    • 0037108887 scopus 로고    scopus 로고
    • Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search
    • Keller A, Nesvizhskii AI, Kolker E et al. Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search. Anal Chem 2002;74:5383?92.
    • (2002) Anal Chem , vol.74 , pp. 5383-5392
    • Keller, A1    Nesvizhskii, AI2    Kolker, E3
  • 19
    • 84893511241 scopus 로고    scopus 로고
    • Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes
    • Kim M, Oh HS, Park SC et al. Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes. Int J Syst Evol Micr 2014;64:346?51.
    • (2014) Int J Syst Evol Micr , vol.64 , pp. 346-351
    • Kim, M1    Oh, HS2    Park, SC3
  • 20
    • 35948975729 scopus 로고    scopus 로고
    • The use of stable isotope probing to identify key iron-reducing microorganisms involved in anaerobic benzene degradation
    • Kunapuli U, Lueders T, Meckenstock RU. The use of stable isotope probing to identify key iron-reducing microorganisms involved in anaerobic benzene degradation. ISME J 2007;1:643?53.
    • (2007) ISME J , vol.1 , pp. 643-653
    • Kunapuli, U1    Lueders, T2    Meckenstock, RU.3
  • 21
    • 70449578272 scopus 로고    scopus 로고
    • Identification and characterization of the tungsten-containing class of benzoylcoenzyme A reductases
    • Kung JW, Loffler C, Dorner K et al. Identification and characterization of the tungsten-containing class of benzoylcoenzyme A reductases. P Natl Acad Sci USA 2009;106: 17687?92.
    • (2009) P Natl Acad Sci USA , vol.106 , pp. 17687-17692
    • Kung, JW1    Loffler, C2    Dorner, K3
  • 22
    • 84897133117 scopus 로고    scopus 로고
    • MOSAIK: a hash-based algorithm for accurate next-generation sequencing short-read mapping
    • Lee WP, Stromberg MP, Ward A et al. MOSAIK: a hash-based algorithm for accurate next-generation sequencing short-read mapping. PLoS One 2014;9:e90581.
    • (2014) PLoS One , vol.9 , pp. e90581
    • Lee, WP1    Stromberg, MP2    Ward, A3
  • 23
    • 79952090458 scopus 로고    scopus 로고
    • Occurrence, genes and expression of the W/Se-containing class II benzoyl- Coenzyme A reductases in anaerobic bacteria
    • Loffler C, Kuntze K, Vazquez JR et al. Occurrence, genes and expression of the W/Se-containing class II benzoyl- Coenzyme A reductases in anaerobic bacteria. Environ Microbiol 2011;13:696?709.
    • (2011) Environ Microbiol , vol.13 , pp. 696-709
    • Loffler, C1    Kuntze, K2    Vazquez, JR3
  • 24
    • 84987624172 scopus 로고    scopus 로고
    • Cultivatingmicrobial dark matter in benzene-degrading methanogenic consortia
    • Luo F, Devine CE, Edwards EA. Cultivatingmicrobial dark matter in benzene-degrading methanogenic consortia. Environ Microbiol 2016;18:2923?36.
    • (2016) Environ Microbiol , vol.18 , pp. 2923-2936
    • Luo, F1    Devine, CE2    Edwards, EA.3
  • 25
    • 84903134555 scopus 로고    scopus 로고
    • Metatranscriptome of an anaerobic benzene-degrading, nitrate-reducing enrichment culture reveals involvement of carboxylation in benzene ring activation
    • Luo F, Gitiafroz R, Devine CE et al. Metatranscriptome of an anaerobic benzene-degrading, nitrate-reducing enrichment culture reveals involvement of carboxylation in benzene ring activation. Appl Environ Microb 2014;80:4095?107.
    • (2014) Appl Environ Microb , vol.80 , pp. 4095-4107
    • Luo, F1    Gitiafroz, R2    Devine, CE3
  • 26
    • 78650601515 scopus 로고    scopus 로고
    • Multiple syntrophic interactions in a terephthalate-degrading methanogenic consortium
    • Lykidis A, Chen CL, Tringe SG et al. Multiple syntrophic interactions in a terephthalate-degrading methanogenic consortium. ISME J 2011;5:122?30.
    • (2011) ISME J , vol.5 , pp. 122-130
    • Lykidis, A1    Chen, CL2    Tringe, SG3
  • 27
    • 0033011827 scopus 로고    scopus 로고
    • Polycyclic aromatic hydrocarbons in natural waters: sources, occurrence and analysis
    • Manoli E, Samara C. Polycyclic aromatic hydrocarbons in natural waters: sources, occurrence and analysis. Trends Analyt Chem 1999;18:417?28.
    • (1999) Trends Analyt Chem , vol.18 , pp. 417-428
    • Manoli, E1    Samara, C.2
  • 28
    • 84891800783 scopus 로고    scopus 로고
    • IMG/M 4 version of the integrated metagenome comparative analysis system
    • Markowitz VM, Chen IM, Chu K et al. IMG/M 4 version of the integrated metagenome comparative analysis system. Nucleic Acids Res 2014;42:D568?73.
    • (2014) Nucleic Acids Res , vol.42 , pp. D568-D573
    • Markowitz, VM1    Chen, IM2    Chu, K3
  • 29
    • 79957985337 scopus 로고    scopus 로고
    • Anaerobic degradation of nonsubstituted aromatic hydrocarbons
    • Meckenstock RU, Mouttaki H. Anaerobic degradation of nonsubstituted aromatic hydrocarbons. Curr Opin Biotechnol 2011;22:406?14.
    • (2011) Curr Opin Biotechnol , vol.22 , pp. 406-414
    • Meckenstock, RU1    Mouttaki, H.2
  • 30
    • 84875578097 scopus 로고    scopus 로고
    • Using Tablet for visual exploration of second-generation sequencing data
    • Milne I, Stephen G, Bayer M et al. Using Tablet for visual exploration of second-generation sequencing data. Brief Bioinform 2013;14:193?202.
    • (2013) Brief Bioinform , vol.14 , pp. 193-202
    • Milne, I1    Stephen, G2    Bayer, M3
  • 31
    • 84906071025 scopus 로고    scopus 로고
    • Evidence for a hexaheteromeric methylenetetrahydrofolate reductase in Moorella thermoacetica
    • Mock J, Wang S, Huang H et al. Evidence for a hexaheteromeric methylenetetrahydrofolate reductase in Moorella thermoacetica. J Bacteriol 2014;196:3303?14.
    • (2014) J Bacteriol , vol.196 , pp. 3303-3314
    • Mock, J1    Wang, S2    Huang, H3
  • 32
    • 38149026187 scopus 로고    scopus 로고
    • Anaerobic degradation of benzene by a marine sulfate-reducing enrichment culture, and cell hybridization of the dominant phylotype
    • Musat F, Widdel F. Anaerobic degradation of benzene by a marine sulfate-reducing enrichment culture, and cell hybridization of the dominant phylotype. EnvironMicrobiol 2008; 10:10?9.
    • (2008) EnvironMicrobiol , vol.10 , pp. 10-19
    • Musat, F1    Widdel, F.2
  • 33
    • 84861369543 scopus 로고    scopus 로고
    • Identification and characterization of a succinyl-Coenzyme A (CoA):benzoate CoA transferase in Geobacter metallireducens
    • Oberender J, Kung JW, Seifert J et al. Identification and characterization of a succinyl-Coenzyme A (CoA):benzoate CoA transferase in Geobacter metallireducens. J Bacteriol 2012;194: 2501?8.
    • (2012) J Bacteriol , vol.194 , pp. 2501-2508
    • Oberender, J1    Kung, JW2    Seifert, J3
  • 34
    • 84937040910 scopus 로고    scopus 로고
    • CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
    • Parks DH, Imelfort M, Skennerton CT et al. CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes. Genome Res 2015;25:1043?55.
    • (2015) Genome Res , vol.25 , pp. 1043-1055
    • Parks, DH1    Imelfort, M2    Skennerton, CT3
  • 35
    • 79960354818 scopus 로고    scopus 로고
    • A comparative genomic analysis of energy metabolism in sulfate reducing bacteria and archaea
    • Pereira IA, Ramos AR, Grein F et al. A comparative genomic analysis of energy metabolism in sulfate reducing bacteria and archaea. Front Microbiol 2011;2:69.
    • (2011) Front Microbiol , vol.2 , pp. 69
    • Pereira, IA1    Ramos, AR2    Grein, F3
  • 36
    • 0035213117 scopus 로고    scopus 로고
    • Use of stable isotopes to identify benzoate as a metabolite of benzene degradation in a sulphidogenic consortium
    • Phelps CD, Zhang ZM, Young LY. Use of stable isotopes to identify benzoate as a metabolite of benzene degradation in a sulphidogenic consortium. Environ Microbiol 2001;3:600?3.
    • (2001) Environ Microbiol , vol.3 , pp. 600-603
    • Phelps, CD1    Zhang, ZM2    Young, LY.3
  • 37
    • 84865698019 scopus 로고    scopus 로고
    • Metabolic flexibility of sulfate-reducing bacteria
    • Plugge CM, Zhang W, Scholten JC et al. Metabolic flexibility of sulfate-reducing bacteria. Front Microbiol 2011;2:81.
    • (2011) Front Microbiol , vol.2 , pp. 81
    • Plugge, CM1    Zhang, W2    Scholten, JC3
  • 38
    • 33644772381 scopus 로고    scopus 로고
    • Pelotomaculum terephthalicum sp. nov. and Pelotomaculum isophthalicum sp. nov.: two anaerobic bacteria that degrade phthalate isomers in syntrophic association with hydrogenotrophic methanogens
    • Qiu YL, Sekiguchi Y, Hanada S et al. Pelotomaculum terephthalicum sp. nov. and Pelotomaculum isophthalicum sp. nov.: two anaerobic bacteria that degrade phthalate isomers in syntrophic association with hydrogenotrophic methanogens. Arch Microbiol 2006;185:172?82.
    • (2006) Arch Microbiol , vol.185 , pp. 172-182
    • Qiu, YL1    Sekiguchi, Y2    Hanada, S3
  • 39
    • 79960172703 scopus 로고    scopus 로고
    • Effects of hydrogen and acetate on benzene mineralisation under sulphate-reducing conditions
    • Rakoczy J, Schleinitz KM, Muller N et al. Effects of hydrogen and acetate on benzene mineralisation under sulphate-reducing conditions. FEMS Microbiol Ecol 2011;77:238?47.
    • (2011) FEMS Microbiol Ecol , vol.77 , pp. 238-247
    • Rakoczy, J1    Schleinitz, KM2    Muller, N3
  • 40
    • 84937073958 scopus 로고    scopus 로고
    • The FlxABCD-HdrABC proteins correspond to a novel NADH dehydrogenase/ heterodisulfide reductase widespread in anaerobic bacteria and involved in ethanol metabolism in Desulfovibrio vulgaris Hildenborough
    • Ramos AR, Grein F, Oliveira GP et al. The FlxABCD-HdrABC proteins correspond to a novel NADH dehydrogenase/ heterodisulfide reductase widespread in anaerobic bacteria and involved in ethanol metabolism in Desulfovibrio vulgaris Hildenborough. Environ Microbiol 2015;17:2288?305.
    • (2015) Environ Microbiol , vol.17 , pp. 2288-2305
    • Ramos, AR1    Grein, F2    Oliveira, GP3
  • 41
    • 73849094007 scopus 로고    scopus 로고
    • Combined genomic and proteomic approaches identify gene clusters involved in anaerobic 2-methylnaphthalene degradation in the sulfate-reducing enrichment culture N47
    • Selesi D, Jehmlich N, von Bergen M et al. Combined genomic and proteomic approaches identify gene clusters involved in anaerobic 2-methylnaphthalene degradation in the sulfate-reducing enrichment culture N47. J Bacteriol 2010;192: 295?306.
    • (2010) J Bacteriol , vol.192 , pp. 295-306
    • Selesi, D1    Jehmlich, N2    von Bergen, M3
  • 42
    • 0038241205 scopus 로고
    • Anaerobic acetate oxidation to CO2 by Desulfotomaculum acetoxidans
    • Spormann AM, Thauer RK. Anaerobic acetate oxidation to CO2 by Desulfotomaculum acetoxidans. Arch Microbiol 1988;150: 374?80.
    • (1988) Arch Microbiol , vol.150 , pp. 374-380
    • Spormann, AM1    Thauer, RK.2
  • 43
    • 67651202726 scopus 로고    scopus 로고
    • Electron transfer in syntrophic communities of anaerobic bacteria and archaea
    • Stams AJ, Plugge CM. Electron transfer in syntrophic communities of anaerobic bacteria and archaea. Nat Rev Microbiol 2009;7:568?77.
    • (2009) Nat Rev Microbiol , vol.7 , pp. 568-577
    • Stams, AJ1    Plugge, CM.2
  • 44
    • 84941140948 scopus 로고    scopus 로고
    • rrnDB: improved tools for interpreting rRNA gene abundance in bacteria and archaea and a new foundation for future development
    • Stoddard SF, Smith BJ, Hein R et al. rrnDB: improved tools for interpreting rRNA gene abundance in bacteria and archaea and a new foundation for future development. Nucleic Acids Res 2015;43:D593?8.
    • (2015) Nucleic Acids Res , vol.43 , pp. D593-D598
    • Stoddard, SF1    Smith, BJ2    Hein, R3
  • 45
    • 65349107674 scopus 로고    scopus 로고
    • Genome sequence of Desulfobacterium autotrophicum HRM2, a marine sulfate reducer oxidizing organic carbon completely to carbon dioxide
    • Strittmatter AW, Liesegang H, Rabus R et al. Genome sequence of Desulfobacterium autotrophicum HRM2, a marine sulfate reducer oxidizing organic carbon completely to carbon dioxide. Environ Microbiol 2009;11:1038?55.
    • (2009) Environ Microbiol , vol.11 , pp. 1038-1055
    • Strittmatter, AW1    Liesegang, H2    Rabus, R3
  • 46
    • 84871289127 scopus 로고    scopus 로고
    • Protein-SIP enables time-resolved analysis of the carbon flux in a sulfatereducing, benzene-degrading microbial consortium
    • Taubert M, Vogt C, Wubet T et al. Protein-SIP enables time-resolved analysis of the carbon flux in a sulfatereducing, benzene-degrading microbial consortium. ISME J 2012;6:2291?301.
    • (2012) ISME J , vol.6 , pp. 2291-2301
    • Taubert, M1    Vogt, C2    Wubet, T3
  • 47
    • 0037297033 scopus 로고    scopus 로고
    • Physiological and molecular characterization of anaerobic benzene-degrading mixed cultures
    • Ulrich AC, Edwards EA. Physiological and molecular characterization of anaerobic benzene-degrading mixed cultures. Environ Microbiol 2003;5:92?102.
    • (2003) Environ Microbiol , vol.5 , pp. 92-102
    • Ulrich, AC1    Edwards, EA.2
  • 48
    • 84859973069 scopus 로고    scopus 로고
    • Anaerobic benzene degradation under denitrifying conditions: Peptococcaceae as dominant benzene degraders and evidence for a syntrophic process
    • van der Zaan BM, Saia FT, Stams AJ et al. Anaerobic benzene degradation under denitrifying conditions: Peptococcaceae as dominant benzene degraders and evidence for a syntrophic process. Environ Microbiol 2012;14:1171?81.
    • (2012) Environ Microbiol , vol.14 , pp. 1171-1181
    • van der Zaan, BM1    Saia, FT2    Stams, AJ3
  • 49
    • 84874617282 scopus 로고    scopus 로고
    • Apoe, Mbl2, and Psp plasma protein levels correlate with diabetic phenotype in NZOmice-an optimized rapidworkflowfor SRM-based quantification
    • von Toerne C, Kahle M, Sch? afer A et al. Apoe, Mbl2, and Psp plasma protein levels correlate with diabetic phenotype in NZOmice-an optimized rapidworkflowfor SRM-based quantification. J Proteome Res 2013;12:1331?43.
    • (2013) J Proteome Res , vol.12 , pp. 1331-1343
    • von Toerne, C1    Kahle, M2    Sch? afer, A3
  • 50
    • 28244469690 scopus 로고    scopus 로고
    • Gene clusters involved in anaerobic benzoate degradation of Geobacter metallireducens
    • Wischgoll S, Heintz D, Peters F et al. Gene clusters involved in anaerobic benzoate degradation of Geobacter metallireducens. Mol Microbiol 2005;58:1238?52.
    • (2005) Mol Microbiol , vol.58 , pp. 1238-1252
    • Wischgoll, S1    Heintz, D2    Peters, F3
  • 51
    • 67349266694 scopus 로고    scopus 로고
    • Universal sample preparation method for proteome analysis
    • Wisniewski JR, Zougman A, Nagaraj N et al. Universal sample preparation method for proteome analysis. Nat Meth 2009;6:359?62.
    • (2009) Nat Meth , vol.6 , pp. 359-362
    • Wisniewski, JR1    Zougman, A2    Nagaraj, N3
  • 52
    • 84876502985 scopus 로고    scopus 로고
    • Complete genome, catabolic sub-proteomes and key-metabolites of Desulfobacula toluolica Tol2, a marine, aromatic compound-degrading, sulfate-reducing bacterium
    • Wohlbrand L, Jacob JH, Kube M et al. Complete genome, catabolic sub-proteomes and key-metabolites of Desulfobacula toluolica Tol2, a marine, aromatic compound-degrading, sulfate-reducing bacterium. Environ Microbiol 2013;15: 1334?55.
    • (2013) Environ Microbiol , vol.15 , pp. 1334-1355
    • Wohlbrand, L1    Jacob, JH2    Kube, M3
  • 53
    • 84871914450 scopus 로고    scopus 로고
    • Community and proteomic analysis of methanogenic consortia degrading terephthalate
    • Wu JH, Wu FY, Chuang HP et al. Community and proteomic analysis of methanogenic consortia degrading terephthalate. Appl Environ Microb 2013;79:105?12.
    • (2013) Appl Environ Microb , vol.79 , pp. 105-112
    • Wu, JH1    Wu, FY2    Chuang, HP3
  • 54
    • 84859242353 scopus 로고    scopus 로고
    • Phylogenomic analysis of bacterial and archaeal sequences with AMPHORA2
    • Wu M, Scott AJ. Phylogenomic analysis of bacterial and archaeal sequences with AMPHORA2. Bioinformatics 2012;28: 1033?4.
    • (2012) Bioinformatics , vol.28 , pp. 1033-1034
    • Wu, M1    Scott, AJ.2
  • 55
    • 84870839463 scopus 로고    scopus 로고
    • Anaerobic benzene oxidation by Geobacter species
    • Zhang T, Bain TS, Nevin KP et al. Anaerobic benzene oxidation by Geobacter species. Appl Environ Microb 2012;78:8304?10.
    • (2012) Appl Environ Microb , vol.78 , pp. 8304-8310
    • Zhang, T1    Bain, TS2    Nevin, KP3
  • 56
    • 84888267751 scopus 로고    scopus 로고
    • Anaerobic benzene oxidation via phenol in Geobacter metallireducens
    • Zhang T, Tremblay PL, Chaurasia AK et al. Anaerobic benzene oxidation via phenol in Geobacter metallireducens. Appl Environ Microb 2013;79:7800?6.
    • (2013) Appl Environ Microb , vol.79 , pp. 7800-7806
    • Zhang, T1    Tremblay, PL2    Chaurasia, AK3
  • 57
    • 0030070838 scopus 로고    scopus 로고
    • DNA recovery from soils of diverse composition
    • Zhou J, Bruns MA, Tiedje JM. DNA recovery from soils of diverse composition. Appl Environ Microb 1996;62:316?22.
    • (1996) Appl Environ Microb , vol.62 , pp. 316-322
    • Zhou, J1    Bruns, MA2    Tiedje, JM.3


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