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Volumn 50, Issue 3, 2012, Pages 221-228

Development of a Quantitative Real-Time Nucleic Acid Sequence-Based Amplification Assay with an Internal Control Using Molecular Beacon Probes for Selective and Sensitive Detection of Human Rhinovirus Serotypes

Author keywords

Human rhinovirus; Internal control; Molecular beacon; Nucleic acid sequence based amplification; RNA detection and quantification

Indexed keywords

DIAGNOSIS; FINANCE; PROBES; RNA;

EID: 85027916674     PISSN: 10736085     EISSN: 15590305     Source Type: Journal    
DOI: 10.1007/s12033-011-9432-4     Document Type: Article
Times cited : (17)

References (35)
  • 1
    • 0021269694 scopus 로고
    • Respiratory virus infections and aeroallergens in acute bronchial asthma
    • COI: 1:STN:280:DyaL2c3gtF2gsA%3D%3D
    • Carlsen, K. H., Orstavik, I., Leegaard, J., & Høeg, H. (1984). Respiratory virus infections and aeroallergens in acute bronchial asthma. Archives of Disease in Childhood, 59, 310–315.
    • (1984) Archives of Disease in Childhood , vol.59 , pp. 310-315
    • Carlsen, K.H.1    Orstavik, I.2    Leegaard, J.3    Høeg, H.4
  • 5
    • 0027270216 scopus 로고
    • Improved detection of rhinoviruses in nasal and throat swabs by seminested RT-PCR
    • COI: 1:CAS:528:DyaK3sXlsFaqsrk%3D
    • Ireland, D. C., Kent, J., & Nicholson, K. G. (1993). Improved detection of rhinoviruses in nasal and throat swabs by seminested RT-PCR. Journal of Medical Virology, 40, 96–101.
    • (1993) Journal of Medical Virology , vol.40 , pp. 96-101
    • Ireland, D.C.1    Kent, J.2    Nicholson, K.G.3
  • 8
    • 0029027898 scopus 로고
    • Effect of respiratory virus infections including rhinovirus on clinical status in cystic fibrosis
    • COI: 1:STN:280:DyaK28%2FgsFOntQ%3D%3D
    • Smyth, A. R., Smyth, R. L., Tong, C. Y., Hart, C. A., & Heaf, D. P. (1995). Effect of respiratory virus infections including rhinovirus on clinical status in cystic fibrosis. Archives of Disease in Childhood, 73, 117–120.
    • (1995) Archives of Disease in Childhood , vol.73 , pp. 117-120
    • Smyth, A.R.1    Smyth, R.L.2    Tong, C.Y.3    Hart, C.A.4    Heaf, D.P.5
  • 9
    • 0030710196 scopus 로고    scopus 로고
    • Acute viral infections of upper respiratory tract in elderly people living in the community: Comparative, prospective, population based study of disease burden
    • COI: 1:STN:280:DyaK1c%2FjtlGgsw%3D%3D
    • Nicholson, K. G., Kent, J., Hammersley, V., & Cancio, E. (1997). Acute viral infections of upper respiratory tract in elderly people living in the community: Comparative, prospective, population based study of disease burden. British Medical Journal, 315, 1060–1064.
    • (1997) British Medical Journal , vol.315 , pp. 1060-1064
    • Nicholson, K.G.1    Kent, J.2    Hammersley, V.3    Cancio, E.4
  • 10
    • 1842335103 scopus 로고    scopus 로고
    • Detection of rhinovirus in sinus brushings of patients with acute community-acquired sinusitis by reverse transcription-PCR
    • Pitkäranta, A., Arruda, E., Malmberg, H., & Hayden, F. G. (1997). Detection of rhinovirus in sinus brushings of patients with acute community-acquired sinusitis by reverse transcription-PCR. Journal of Clinical Microbiology, 35, 1791–1793.
    • (1997) Journal of Clinical Microbiology , vol.35 , pp. 1791-1793
    • Pitkäranta, A.1    Arruda, E.2    Malmberg, H.3    Hayden, F.G.4
  • 12
    • 0032928526 scopus 로고    scopus 로고
    • Conventional respiratory viruses recovered from immunocompromised patients: clinical considerations
    • COI: 1:STN:280:DyaK1MznvFOjsw%3D%3D
    • Rabella, N., Rodriguez, P., Labeaga, R., Otegui, M., Mercader, M., Gurguí, M., et al. (1999). Conventional respiratory viruses recovered from immunocompromised patients: clinical considerations. Clinical Infectious Diseases, 28, 1043–1048.
    • (1999) Clinical Infectious Diseases , vol.28 , pp. 1043-1048
    • Rabella, N.1    Rodriguez, P.2    Labeaga, R.3    Otegui, M.4    Mercader, M.5    Gurguí, M.6    Prats, G.7
  • 13
    • 0037079850 scopus 로고    scopus 로고
    • Polymerase chain reaction is more sensitive than viral culture and antigen testing for the detection of respiratory viruses in adults with hematological cancer and pneumonia
    • Van Elden, L. J., van Kraaij, M. G., Nijhuis, M., Hendriksen, K. A., Dekker, A. W., Rozenberg-Arska, M., et al. (2002). Polymerase chain reaction is more sensitive than viral culture and antigen testing for the detection of respiratory viruses in adults with hematological cancer and pneumonia. Clinical Infectious Diseases, 24, 177–183.
    • (2002) Clinical Infectious Diseases , vol.24 , pp. 177-183
    • Van Elden, L.J.1    van Kraaij, M.G.2    Nijhuis, M.3    Hendriksen, K.A.4    Dekker, A.W.5    Rozenberg-Arska, M.6    van Loon, A.M.7
  • 15
    • 0024411566 scopus 로고
    • Amplification of rhinovirus specific nucleic acids from clinical samples using the polymerase chain reaction
    • COI: 1:CAS:528:DyaL1MXlvFSrurs%3D
    • Gama, R. E., Horsnell, P. R., Hughes, P. J., North, C., Bruce, C. B., al-Nakib, W., et al. (1989). Amplification of rhinovirus specific nucleic acids from clinical samples using the polymerase chain reaction. Journal of Medical Virology, 28, 73–77.
    • (1989) Journal of Medical Virology , vol.28 , pp. 73-77
    • Gama, R.E.1    Horsnell, P.R.2    Hughes, P.J.3    North, C.4    Bruce, C.B.5    al-Nakib, W.6    Stanway, G.7
  • 17
    • 0031968099 scopus 로고    scopus 로고
    • Development and application of a new method for amplification and detection of human rhinovirus RNA
    • COI: 1:CAS:528:DyaK1cXis1Oqt7g%3D
    • Samuelson, A., Westmoreland, D., Eccles, R., & Fox, J. D. (1998). Development and application of a new method for amplification and detection of human rhinovirus RNA. Journal of Virological Methods, 71, 197–209.
    • (1998) Journal of Virological Methods , vol.71 , pp. 197-209
    • Samuelson, A.1    Westmoreland, D.2    Eccles, R.3    Fox, J.D.4
  • 18
    • 0037952729 scopus 로고    scopus 로고
    • Improved detection of rhinoviruses by nucleic acid sequence-based amplification after nucleotide sequence determination of the 5′ noncoding regions of additional rhinovirus strains
    • COI: 1:CAS:528:DC%2BD3sXktlGrs7k%3D
    • Loens, K., Ieven, M., Ursi, D., De Laat, C., Sillekens, P., Oudshoorn, P., et al. (2003). Improved detection of rhinoviruses by nucleic acid sequence-based amplification after nucleotide sequence determination of the 5′ noncoding regions of additional rhinovirus strains. Journal of Clinical Microbiology, 41, 1971–1976.
    • (2003) Journal of Clinical Microbiology , vol.41 , pp. 1971-1976
    • Loens, K.1    Ieven, M.2    Ursi, D.3    De Laat, C.4    Sillekens, P.5    Oudshoorn, P.6    Goossens, H.7
  • 19
    • 11844259468 scopus 로고    scopus 로고
    • Increased precision of microbial RNA quantification using NASBA with an internal control
    • COI: 1:CAS:528:DC%2BD2MXkvFaksA%3D%3D
    • Patterson, S. S., Casper, E. T., Garcia-Rubio, L., Smith, M. C., & Paul, J. H, I. I. I. (2005). Increased precision of microbial RNA quantification using NASBA with an internal control. Journal of Microbiological Methods, 60, 343–352.
    • (2005) Journal of Microbiological Methods , vol.60 , pp. 343-352
    • Patterson, S.S.1    Casper, E.T.2    Garcia-Rubio, L.3    Smith, M.C.4    Paul, J.H.5
  • 20
    • 30744470413 scopus 로고    scopus 로고
    • Detection of rhinoviruses by tissue culture and two independent amplification techniques, nucleic acid sequence-based amplification and reverse transcription-PCR, in children with acute respiratory infections during a winter season
    • COI: 1:CAS:528:DC%2BD28XhtVymt7s%3D
    • Loens, K., Goossens, H., de Laat, C., Foolen, H., Oudshoorn, P., Pattyn, S., et al. (2006). Detection of rhinoviruses by tissue culture and two independent amplification techniques, nucleic acid sequence-based amplification and reverse transcription-PCR, in children with acute respiratory infections during a winter season. Journal of Clinical Microbiology, 44, 166–171.
    • (2006) Journal of Clinical Microbiology , vol.44 , pp. 166-171
    • Loens, K.1    Goossens, H.2    de Laat, C.3    Foolen, H.4    Oudshoorn, P.5    Pattyn, S.6    Sillekens, P.7    Ieven, M.8
  • 21
    • 11844299682 scopus 로고    scopus 로고
    • Real-time nucleic acid sequence-based amplification is more convenient than real-time PCR for quantification of Plasmodium falciparum
    • COI: 1:CAS:528:DC%2BD2MXhtF2msr4%3D
    • Schneider, P., Wolters, L., Schoone, G., Schallig, H., Sillekens, P., Hermsen, R., et al. (2005). Real-time nucleic acid sequence-based amplification is more convenient than real-time PCR for quantification of Plasmodium falciparum. Journal of Clinical Microbiology, 43, 402–405.
    • (2005) Journal of Clinical Microbiology , vol.43 , pp. 402-405
    • Schneider, P.1    Wolters, L.2    Schoone, G.3    Schallig, H.4    Sillekens, P.5    Hermsen, R.6    Sauerwein, R.7
  • 22
    • 33745179885 scopus 로고    scopus 로고
    • Evaluation of a real-time nucleic acid sequence-based amplification assay using molecular beacons for detection of human immunodeficiency virus type 1
    • COI: 1:STN:280:DC%2BD28zktlyktw%3D%3D
    • McClernon, D. R., Vavro, C., & St Clair, M. (2006). Evaluation of a real-time nucleic acid sequence-based amplification assay using molecular beacons for detection of human immunodeficiency virus type 1. Journal of Clinical Microbiology, 44, 2280–2282.
    • (2006) Journal of Clinical Microbiology , vol.44 , pp. 2280-2282
    • McClernon, D.R.1    Vavro, C.2    St Clair, M.3
  • 23
    • 33749606425 scopus 로고    scopus 로고
    • Detection and identification of human Plasmodium species with real-time quantitative nucleic acid sequence-based amplification
    • Mens, P. F., Schoone, G. J., Kager, P. A., & Schallig, H. D. (2006). Detection and identification of human Plasmodium species with real-time quantitative nucleic acid sequence-based amplification. Malaria Journal, 5, 80.
    • (2006) Malaria Journal , vol.5 , pp. 80
    • Mens, P.F.1    Schoone, G.J.2    Kager, P.A.3    Schallig, H.D.4
  • 24
    • 35648997987 scopus 로고    scopus 로고
    • Rapid and highly sensitive qualitative real-time assay for detection of respiratory syncytial virus A and B using NASBA and molecular beacon technology
    • COI: 1:CAS:528:DC%2BD2sXht1KrsLzL
    • Deiman, B., Schrover, C., Moore, C., Westmoreland, D., & van de Wiel, P. (2007). Rapid and highly sensitive qualitative real-time assay for detection of respiratory syncytial virus A and B using NASBA and molecular beacon technology. Journal of Virological Methods, 146, 29–35.
    • (2007) Journal of Virological Methods , vol.146 , pp. 29-35
    • Deiman, B.1    Schrover, C.2    Moore, C.3    Westmoreland, D.4    van de Wiel, P.5
  • 25
    • 33847409234 scopus 로고    scopus 로고
    • A molecular beacon-based real time NASBA assay for detection of Listeria monocytogenes in food products: role of target mRNA secondary structure on NASBA design
    • COI: 1:CAS:528:DC%2BD2sXhvVCrtrc%3D
    • Nadal, A., Coll, A., Cook, N., & Pla, M. (2007). A molecular beacon-based real time NASBA assay for detection of Listeria monocytogenes in food products: role of target mRNA secondary structure on NASBA design. Journal of Microbiological Methods, 68, 623–632.
    • (2007) Journal of Microbiological Methods , vol.68 , pp. 623-632
    • Nadal, A.1    Coll, A.2    Cook, N.3    Pla, M.4
  • 26
    • 47249152212 scopus 로고    scopus 로고
    • Detection of Trypanosoma brucei parasites in blood samples using real-time nucleic acid sequence-based amplification
    • COI: 1:CAS:528:DC%2BD1cXoslWnsLc%3D
    • Mugasa, C. M., Schoone, G. J., Ekangu, R. A., Lubega, G. W., Kager, P. A., & Schallig, H. D. (2008). Detection of Trypanosoma brucei parasites in blood samples using real-time nucleic acid sequence-based amplification. Diagnostic Microbiology and Infectious Disease, 61, 440–445.
    • (2008) Diagnostic Microbiology and Infectious Disease , vol.61 , pp. 440-445
    • Mugasa, C.M.1    Schoone, G.J.2    Ekangu, R.A.3    Lubega, G.W.4    Kager, P.A.5    Schallig, H.D.6
  • 27
    • 68549099649 scopus 로고    scopus 로고
    • Quantitative determination of Plasmodium vivax gametocytes by real-time quantitative nucleic acid sequence-based amplification in clinical samples
    • COI: 1:CAS:528:DC%2BD1MXhtValsbnN
    • Beurskens, M., Mens, P., Schallig, H., Syafruddin, D., Asih, P. B., Hermsen, R., et al. (2009). Quantitative determination of Plasmodium vivax gametocytes by real-time quantitative nucleic acid sequence-based amplification in clinical samples. American Journal of Tropical Medicine and Hygiene, 81, 366–369.
    • (2009) American Journal of Tropical Medicine and Hygiene , vol.81 , pp. 366-369
    • Beurskens, M.1    Mens, P.2    Schallig, H.3    Syafruddin, D.4    Asih, P.B.5    Hermsen, R.6    Sauerwein, R.7
  • 28
    • 73049102262 scopus 로고    scopus 로고
    • Detection of novel swine origin influenza A virus (H1N1) by real-time nucleic acid sequence-based amplification
    • COI: 1:CAS:528:DC%2BC3cXjtleruw%3D%3D
    • Ge, Y., Cui, L., Qi, X., Shan, J., Shan, Y., Qi, Y., et al. (2010). Detection of novel swine origin influenza A virus (H1N1) by real-time nucleic acid sequence-based amplification. Journal of Virological Methods, 163, 495–497.
    • (2010) Journal of Virological Methods , vol.163 , pp. 495-497
    • Ge, Y.1    Cui, L.2    Qi, X.3    Shan, J.4    Shan, Y.5    Qi, Y.6    Wu, B.7    Wang, H.8    Shi, Z.9
  • 29
    • 77950466051 scopus 로고    scopus 로고
    • Detection of Aspergillus fumigatus in a rat model of invasive pulmonary aspergillosis by real-time nucleic acid sequence-based amplification
    • COI: 1:CAS:528:DC%2BC3cXmt1Kgurk%3D
    • Zhao, Y., Park, S., Warn, P., Shrief, R., Harrison, E., & Perlin, D. S. (2010). Detection of Aspergillus fumigatus in a rat model of invasive pulmonary aspergillosis by real-time nucleic acid sequence-based amplification. Journal of Clinical Microbiology, 48, 1378–1383.
    • (2010) Journal of Clinical Microbiology , vol.48 , pp. 1378-1383
    • Zhao, Y.1    Park, S.2    Warn, P.3    Shrief, R.4    Harrison, E.5    Perlin, D.S.6
  • 30
    • 18144453269 scopus 로고    scopus 로고
    • Principles of quantitation of viral loads using nucleic acid sequence-based amplification in combination with homogeneous detection using molecular beacons
    • Weusten, J. J., Carpay, W. M., Oosterlaken, T. A., van Zuijlen, M. C., & van de Wiel, P. A. (2002). Principles of quantitation of viral loads using nucleic acid sequence-based amplification in combination with homogeneous detection using molecular beacons. Nucleic Acids Research, 30, 6e26.
    • (2002) Nucleic Acids Research , vol.30 , pp. 6e26
    • Weusten, J.J.1    Carpay, W.M.2    Oosterlaken, T.A.3    van Zuijlen, M.C.4    van de Wiel, P.A.5
  • 32
    • 0033799269 scopus 로고    scopus 로고
    • Human cytomegalovirus virions differentially incorporate viral and host cell RNA during the assembly process
    • COI: 1:CAS:528:DC%2BD3cXmslymtrY%3D
    • Greijer, A. E., Dekkers, C. A., & Middeldorp, J. M. (2000). Human cytomegalovirus virions differentially incorporate viral and host cell RNA during the assembly process. Journal of Virology, 74, 9078–9082.
    • (2000) Journal of Virology , vol.74 , pp. 9078-9082
    • Greijer, A.E.1    Dekkers, C.A.2    Middeldorp, J.M.3
  • 35
    • 1242297004 scopus 로고    scopus 로고
    • Molecular-based methods for quantifying HIV viral load
    • Peter, J. B., & Sevall, J. S. (2004). Molecular-based methods for quantifying HIV viral load. AIDS Patient Care and STDS, 18, 75–79.
    • (2004) AIDS Patient Care and STDS , vol.18 , pp. 75-79
    • Peter, J.B.1    Sevall, J.S.2


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