-
1
-
-
34249079176
-
Surface phenotype and antigenic specificity of human interleukin 17-producing T helper memory cells
-
Acosta-Rodriguez, E.V., Rivino, L., Geginat, J., Jarrossay, D., Gattorno, M., Lanzavecchia, A., Sallusto, F., Napolitani, G., Surface phenotype and antigenic specificity of human interleukin 17-producing T helper memory cells. Nat. Immunol. 8 (2007), 639–646.
-
(2007)
Nat. Immunol.
, vol.8
, pp. 639-646
-
-
Acosta-Rodriguez, E.V.1
Rivino, L.2
Geginat, J.3
Jarrossay, D.4
Gattorno, M.5
Lanzavecchia, A.6
Sallusto, F.7
Napolitani, G.8
-
2
-
-
84948402639
-
Optimized replicating Renilla luciferase reporter HIV-1 utilizing novel internal ribosome entry site elements for native Nef expression and function
-
Alberti, M.O., Jones, J.J., Miglietta, R., Ding, H., Bakshi, R.K., Edmonds, T.G., Kappes, J.C., Ochsenbauer, C., Optimized replicating Renilla luciferase reporter HIV-1 utilizing novel internal ribosome entry site elements for native Nef expression and function. AIDS Res. Hum. Retroviruses 31 (2015), 1278–1296.
-
(2015)
AIDS Res. Hum. Retroviruses
, vol.31
, pp. 1278-1296
-
-
Alberti, M.O.1
Jones, J.J.2
Miglietta, R.3
Ding, H.4
Bakshi, R.K.5
Edmonds, T.G.6
Kappes, J.C.7
Ochsenbauer, C.8
-
3
-
-
84886078818
-
Preferential HIV infection of CCR6+ Th17 cells is associated with higher levels of virus receptor expression and lack of CCR5 ligands
-
Alvarez, Y., Tuen, M., Shen, G., Nawaz, F., Arthos, J., Wolff, M.J., Poles, M.A., Hioe, C.E., Preferential HIV infection of CCR6+ Th17 cells is associated with higher levels of virus receptor expression and lack of CCR5 ligands. J. Virol. 87 (2013), 10843–10854.
-
(2013)
J. Virol.
, vol.87
, pp. 10843-10854
-
-
Alvarez, Y.1
Tuen, M.2
Shen, G.3
Nawaz, F.4
Arthos, J.5
Wolff, M.J.6
Poles, M.A.7
Hioe, C.E.8
-
4
-
-
84880280631
-
viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia
-
Amir, E.D., Davis, K.L., Tadmor, M.D., Simonds, E.F., Levine, J.H., Bendall, S.C., Shenfeld, D.K., Krishnaswamy, S., Nolan, G.P., Pe'er, D., viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia. Nat. Biotechnol. 31 (2013), 545–552.
-
(2013)
Nat. Biotechnol.
, vol.31
, pp. 545-552
-
-
Amir, E.D.1
Davis, K.L.2
Tadmor, M.D.3
Simonds, E.F.4
Levine, J.H.5
Bendall, S.C.6
Shenfeld, D.K.7
Krishnaswamy, S.8
Nolan, G.P.9
Pe'er, D.10
-
5
-
-
84869170593
-
SAMHD1 restricts HIV-1 infection in resting CD4(+) T cells
-
Baldauf, H.M., Pan, X., Erikson, E., Schmidt, S., Daddacha, W., Burggraf, M., Schenkova, K., Ambiel, I., Wabnitz, G., Gramberg, T., et al. SAMHD1 restricts HIV-1 infection in resting CD4(+) T cells. Nat. Med. 18 (2012), 1682–1687.
-
(2012)
Nat. Med.
, vol.18
, pp. 1682-1687
-
-
Baldauf, H.M.1
Pan, X.2
Erikson, E.3
Schmidt, S.4
Daddacha, W.5
Burggraf, M.6
Schenkova, K.7
Ambiel, I.8
Wabnitz, G.9
Gramberg, T.10
-
6
-
-
84899574465
-
Single-cell trajectory detection uncovers progression and regulatory coordination in human B cell development
-
Bendall, S.C., Davis, K.L., Amir, A.D., Tadmor, M.D., Simonds, E.F., Chen, T.J., Shenfeld, D.K., Nolan, G.P., Pe'er, D., Single-cell trajectory detection uncovers progression and regulatory coordination in human B cell development. Cell 157 (2014), 714–725.
-
(2014)
Cell
, vol.157
, pp. 714-725
-
-
Bendall, S.C.1
Davis, K.L.2
Amir, A.D.3
Tadmor, M.D.4
Simonds, E.F.5
Chen, T.J.6
Shenfeld, D.K.7
Nolan, G.P.8
Pe'er, D.9
-
7
-
-
0031042433
-
The HIV coreceptors CXCR4 and CCR5 are differentially expressed and regulated on human T lymphocytes
-
Bleul, C.C., Wu, L., Hoxie, J.A., Springer, T.A., Mackay, C.R., The HIV coreceptors CXCR4 and CCR5 are differentially expressed and regulated on human T lymphocytes. Proc. Natl. Acad. Sci. USA 94 (1997), 1925–1930.
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 1925-1930
-
-
Bleul, C.C.1
Wu, L.2
Hoxie, J.A.3
Springer, T.A.4
Mackay, C.R.5
-
8
-
-
0036844376
-
A sensitive and specific enzyme-based assay detecting HIV-1 virion fusion in primary T lymphocytes
-
Cavrois, M., De Noronha, C., Greene, W.C., A sensitive and specific enzyme-based assay detecting HIV-1 virion fusion in primary T lymphocytes. Nat. Biotechnol. 20 (2002), 1151–1154.
-
(2002)
Nat. Biotechnol.
, vol.20
, pp. 1151-1154
-
-
Cavrois, M.1
De Noronha, C.2
Greene, W.C.3
-
9
-
-
85016555837
-
HIV-1 Fusion Assay
-
Cavrois, M., Neidleman, J., Greene, W.C., HIV-1 Fusion Assay. Biol. Protoc., 4, 2014.
-
(2014)
Biol. Protoc.
, vol.4
-
-
Cavrois, M.1
Neidleman, J.2
Greene, W.C.3
-
10
-
-
68349139711
-
HIV reservoir size and persistence are driven by T cell survival and homeostatic proliferation
-
Chomont, N., El-Far, M., Ancuta, P., Trautmann, L., Procopio, F.A., Yassine-Diab, B., Boucher, G., Boulassel, M.R., Ghattas, G., Brenchley, J.M., et al. HIV reservoir size and persistence are driven by T cell survival and homeostatic proliferation. Nat. Med. 15 (2009), 893–900.
-
(2009)
Nat. Med.
, vol.15
, pp. 893-900
-
-
Chomont, N.1
El-Far, M.2
Ancuta, P.3
Trautmann, L.4
Procopio, F.A.5
Yassine-Diab, B.6
Boucher, G.7
Boulassel, M.R.8
Ghattas, G.9
Brenchley, J.M.10
-
11
-
-
85010843531
-
Comprehensive Mass Cytometry Analysis of Cell Cycle, Activation, and Coinhibitory Receptors Expression in CD4 T Cells from Healthy and HIV-Infected Individuals
-
Corneau, A., Cosma, A., Even, S., Katlama, C., Le Grand, R., Frachet, V., Blanc, C., Autran, B., Comprehensive Mass Cytometry Analysis of Cell Cycle, Activation, and Coinhibitory Receptors Expression in CD4 T Cells from Healthy and HIV-Infected Individuals. Cytometry B Clin. Cytom. 92 (2017), 21–32.
-
(2017)
Cytometry B Clin. Cytom.
, vol.92
, pp. 21-32
-
-
Corneau, A.1
Cosma, A.2
Even, S.3
Katlama, C.4
Le Grand, R.5
Frachet, V.6
Blanc, C.7
Autran, B.8
-
12
-
-
12144289425
-
Envelope-constrained neutralization-sensitive HIV-1 after heterosexual transmission
-
Derdeyn, C.A., Decker, J.M., Bibollet-Ruche, F., Mokili, J.L., Muldoon, M., Denham, S.A., Heil, M.L., Kasolo, F., Musonda, R., Hahn, B.H., et al. Envelope-constrained neutralization-sensitive HIV-1 after heterosexual transmission. Science 303 (2004), 2019–2022.
-
(2004)
Science
, vol.303
, pp. 2019-2022
-
-
Derdeyn, C.A.1
Decker, J.M.2
Bibollet-Ruche, F.3
Mokili, J.L.4
Muldoon, M.5
Denham, S.A.6
Heil, M.L.7
Kasolo, F.8
Musonda, R.9
Hahn, B.H.10
-
13
-
-
77749295656
-
Susceptibility of human Th17 cells to human immunodeficiency virus and their perturbation during infection
-
El Hed, A., Khaitan, A., Kozhaya, L., Manel, N., Daskalakis, D., Borkowsky, W., Valentine, F., Littman, D.R., Unutmaz, D., Susceptibility of human Th17 cells to human immunodeficiency virus and their perturbation during infection. J. Infect. Dis. 201 (2010), 843–854.
-
(2010)
J. Infect. Dis.
, vol.201
, pp. 843-854
-
-
El Hed, A.1
Khaitan, A.2
Kozhaya, L.3
Manel, N.4
Daskalakis, D.5
Borkowsky, W.6
Valentine, F.7
Littman, D.R.8
Unutmaz, D.9
-
14
-
-
77956815759
-
Wilcoxon-Mann-Whitney or t-test? On assumptions for hypothesis tests and multiple interpretations of decision rules
-
Fay, M.P., Proschan, M.A., Wilcoxon-Mann-Whitney or t-test? On assumptions for hypothesis tests and multiple interpretations of decision rules. Stat. Surv. 4 (2010), 1–39.
-
(2010)
Stat. Surv.
, vol.4
, pp. 1-39
-
-
Fay, M.P.1
Proschan, M.A.2
-
15
-
-
0025733252
-
Serine phosphorylation-independent downregulation of cell-surface CD4 by nef
-
Garcia, J.V., Miller, A.D., Serine phosphorylation-independent downregulation of cell-surface CD4 by nef. Nature 350 (1991), 508–511.
-
(1991)
Nature
, vol.350
, pp. 508-511
-
-
Garcia, J.V.1
Miller, A.D.2
-
16
-
-
0029974048
-
Heterogeneity of the human CD4+ T-cell population: two distinct CD4+ T-cell subsets characterized by coexpression of CD45RA and CD45RO isoforms
-
Hamann, D., Baars, P.A., Hooibrink, B., van Lier, R.W., Heterogeneity of the human CD4+ T-cell population: two distinct CD4+ T-cell subsets characterized by coexpression of CD45RA and CD45RO isoforms. Blood 88 (1996), 3513–3521.
-
(1996)
Blood
, vol.88
, pp. 3513-3521
-
-
Hamann, D.1
Baars, P.A.2
Hooibrink, B.3
van Lier, R.W.4
-
17
-
-
0037695061
-
In vivo evolution of human immunodeficiency virus type 1 toward increased pathogenicity through CXCR4-mediated killing of uninfected CD4 T cells
-
Jekle, A., Keppler, O.T., De Clercq, E., Schols, D., Weinstein, M., Goldsmith, M.A., In vivo evolution of human immunodeficiency virus type 1 toward increased pathogenicity through CXCR4-mediated killing of uninfected CD4 T cells. J. Virol. 77 (2003), 5846–5854.
-
(2003)
J. Virol.
, vol.77
, pp. 5846-5854
-
-
Jekle, A.1
Keppler, O.T.2
De Clercq, E.3
Schols, D.4
Weinstein, M.5
Goldsmith, M.A.6
-
18
-
-
84962527945
-
Germinal Center T Follicular Helper Cells Are Highly Permissive to HIV-1 and Alter Their Phenotype during Virus Replication
-
Kohler, S.L., Pham, M.N., Folkvord, J.M., Arends, T., Miller, S.M., Miles, B., Meditz, A.L., McCarter, M., Levy, D.N., Connick, E., Germinal Center T Follicular Helper Cells Are Highly Permissive to HIV-1 and Alter Their Phenotype during Virus Replication. J. Immunol. 196 (2016), 2711–2722.
-
(2016)
J. Immunol.
, vol.196
, pp. 2711-2722
-
-
Kohler, S.L.1
Pham, M.N.2
Folkvord, J.M.3
Arends, T.4
Miller, S.M.5
Miles, B.6
Meditz, A.L.7
McCarter, M.8
Levy, D.N.9
Connick, E.10
-
19
-
-
38049151375
-
Loss of IL-7 receptor alpha on CD4+ T cells defines terminally differentiated B cell-helping effector T cells in a B cell-rich lymphoid tissue
-
Lim, H.W., Kim, C.H., Loss of IL-7 receptor alpha on CD4+ T cells defines terminally differentiated B cell-helping effector T cells in a B cell-rich lymphoid tissue. J. Immunol. 179 (2007), 7448–7456.
-
(2007)
J. Immunol.
, vol.179
, pp. 7448-7456
-
-
Lim, H.W.1
Kim, C.H.2
-
20
-
-
84944269311
-
Cell Surface Proteomic Map of HIV Infection Reveals Antagonism of Amino Acid Metabolism by Vpu and Nef
-
Matheson, N.J., Sumner, J., Wals, K., Rapiteanu, R., Weekes, M.P., Vigan, R., Weinelt, J., Schindler, M., Antrobus, R., Costa, A.S., et al. Cell Surface Proteomic Map of HIV Infection Reveals Antagonism of Amino Acid Metabolism by Vpu and Nef. Cell Host Microbe 18 (2015), 409–423.
-
(2015)
Cell Host Microbe
, vol.18
, pp. 409-423
-
-
Matheson, N.J.1
Sumner, J.2
Wals, K.3
Rapiteanu, R.4
Weekes, M.P.5
Vigan, R.6
Weinelt, J.7
Schindler, M.8
Antrobus, R.9
Costa, A.S.10
-
21
-
-
18044378256
-
The Nef protein of human immunodeficiency virus establishes superinfection immunity by a dual strategy to downregulate cell-surface CCR5 and CD4
-
Michel, N., Allespach, I., Venzke, S., Fackler, O.T., Keppler, O.T., The Nef protein of human immunodeficiency virus establishes superinfection immunity by a dual strategy to downregulate cell-surface CCR5 and CD4. Curr. Biol. 15 (2005), 714–723.
-
(2005)
Curr. Biol.
, vol.15
, pp. 714-723
-
-
Michel, N.1
Allespach, I.2
Venzke, S.3
Fackler, O.T.4
Keppler, O.T.5
-
22
-
-
84879880354
-
Restrictions to HIV-1 replication in resting CD4+ T lymphocytes
-
Pan, X., Baldauf, H.M., Keppler, O.T., Fackler, O.T., Restrictions to HIV-1 replication in resting CD4+ T lymphocytes. Cell Res. 23 (2013), 876–885.
-
(2013)
Cell Res.
, vol.23
, pp. 876-885
-
-
Pan, X.1
Baldauf, H.M.2
Keppler, O.T.3
Fackler, O.T.4
-
23
-
-
0027262235
-
Control of lymphocyte recirculation in man. I. Differential regulation of the peripheral lymph node homing receptor L-selectin on T cells during the virgin to memory cell transition
-
Picker, L.J., Treer, J.R., Ferguson-Darnell, B., Collins, P.A., Buck, D., Terstappen, L.W., Control of lymphocyte recirculation in man. I. Differential regulation of the peripheral lymph node homing receptor L-selectin on T cells during the virgin to memory cell transition. J. Immunol. 150 (1993), 1105–1121.
-
(1993)
J. Immunol.
, vol.150
, pp. 1105-1121
-
-
Picker, L.J.1
Treer, J.R.2
Ferguson-Darnell, B.3
Collins, P.A.4
Buck, D.5
Terstappen, L.W.6
-
24
-
-
80054768631
-
Extracting a cellular hierarchy from high-dimensional cytometry data with SPADE
-
Qiu, P., Simonds, E.F., Bendall, S.C., Gibbs, K.D. Jr., Bruggner, R.V., Linderman, M.D., Sachs, K., Nolan, G.P., Plevritis, S.K., Extracting a cellular hierarchy from high-dimensional cytometry data with SPADE. Nat. Biotechnol. 29 (2011), 886–891.
-
(2011)
Nat. Biotechnol.
, vol.29
, pp. 886-891
-
-
Qiu, P.1
Simonds, E.F.2
Bendall, S.C.3
Gibbs, K.D.4
Bruggner, R.V.5
Linderman, M.D.6
Sachs, K.7
Nolan, G.P.8
Plevritis, S.K.9
-
25
-
-
0033578016
-
Inhibition of HIV-1 progeny virion release by cell-surface CD4 is relieved by expression of the viral Nef protein
-
Ross, T.M., Oran, A.E., Cullen, B.R., Inhibition of HIV-1 progeny virion release by cell-surface CD4 is relieved by expression of the viral Nef protein. Curr. Biol. 9 (1999), 613–621.
-
(1999)
Curr. Biol.
, vol.9
, pp. 613-621
-
-
Ross, T.M.1
Oran, A.E.2
Cullen, B.R.3
-
26
-
-
84904789189
-
Single-cell mass cytometry analysis of human tonsil T cell remodeling by varicella zoster virus
-
Sen, N., Mukherjee, G., Sen, A., Bendall, S.C., Sung, P., Nolan, G.P., Arvin, A.M., Single-cell mass cytometry analysis of human tonsil T cell remodeling by varicella zoster virus. Cell Rep. 8 (2014), 633–645.
-
(2014)
Cell Rep.
, vol.8
, pp. 633-645
-
-
Sen, N.1
Mukherjee, G.2
Sen, A.3
Bendall, S.C.4
Sung, P.5
Nolan, G.P.6
Arvin, A.M.7
-
27
-
-
84947492019
-
Single cell mass cytometry reveals remodeling of human T cell phenotypes by varicella zoster virus
-
Sen, N., Mukherjee, G., Arvin, A.M., Single cell mass cytometry reveals remodeling of human T cell phenotypes by varicella zoster virus. Methods 90 (2015), 85–94.
-
(2015)
Methods
, vol.90
, pp. 85-94
-
-
Sen, N.1
Mukherjee, G.2
Arvin, A.M.3
-
28
-
-
84937604921
-
IMMUNOLOGY. An interactive reference framework for modeling a dynamic immune system
-
Spitzer, M.H., Gherardini, P.F., Fragiadakis, G.K., Bhattacharya, N., Yuan, R.T., Hotson, A.N., Finck, R., Carmi, Y., Zunder, E.R., Fantl, W.J., et al. IMMUNOLOGY. An interactive reference framework for modeling a dynamic immune system. Science, 349, 2015, 1259425.
-
(2015)
Science
, vol.349
, pp. 1259425
-
-
Spitzer, M.H.1
Gherardini, P.F.2
Fragiadakis, G.K.3
Bhattacharya, N.4
Yuan, R.T.5
Hotson, A.N.6
Finck, R.7
Carmi, Y.8
Zunder, E.R.9
Fantl, W.J.10
-
29
-
-
0035794535
-
Mechanism for down-regulation of CD28 by Nef
-
Swigut, T., Shohdy, N., Skowronski, J., Mechanism for down-regulation of CD28 by Nef. EMBO J. 20 (2001), 1593–1604.
-
(2001)
EMBO J.
, vol.20
, pp. 1593-1604
-
-
Swigut, T.1
Shohdy, N.2
Skowronski, J.3
-
31
-
-
84928564447
-
HIV-1 Nef and Vpu Interfere with L-Selectin (CD62L) Cell Surface Expression To Inhibit Adhesion and Signaling in Infected CD4+ T Lymphocytes
-
Vassena, L., Giuliani, E., Koppensteiner, H., Bolduan, S., Schindler, M., Doria, M., HIV-1 Nef and Vpu Interfere with L-Selectin (CD62L) Cell Surface Expression To Inhibit Adhesion and Signaling in Infected CD4+ T Lymphocytes. J. Virol. 89 (2015), 5687–5700.
-
(2015)
J. Virol.
, vol.89
, pp. 5687-5700
-
-
Vassena, L.1
Giuliani, E.2
Koppensteiner, H.3
Bolduan, S.4
Schindler, M.5
Doria, M.6
-
32
-
-
84937638635
-
Mapping the Diversity of Follicular Helper T Cells in Human Blood and Tonsils Using High-Dimensional Mass Cytometry Analysis
-
Wong, M.T., Chen, J., Narayanan, S., Lin, W., Anicete, R., Kiaang, H.T., De Lafaille, M.A., Poidinger, M., Newell, E.W., Mapping the Diversity of Follicular Helper T Cells in Human Blood and Tonsils Using High-Dimensional Mass Cytometry Analysis. Cell Rep. 11 (2015), 1822–1833.
-
(2015)
Cell Rep.
, vol.11
, pp. 1822-1833
-
-
Wong, M.T.1
Chen, J.2
Narayanan, S.3
Lin, W.4
Anicete, R.5
Kiaang, H.T.6
De Lafaille, M.A.7
Poidinger, M.8
Newell, E.W.9
-
33
-
-
84921628192
-
Lentiviral Nef proteins manipulate T cells in a subset-specific manner
-
Yu, H., Khalid, M., Heigele, A., Schmökel, J., Usmani, S.M., van der Merwe, J., Münch, J., Silvestri, G., Kirchhoff, F., Lentiviral Nef proteins manipulate T cells in a subset-specific manner. J. Virol. 89 (2015), 1986–2001.
-
(2015)
J. Virol.
, vol.89
, pp. 1986-2001
-
-
Yu, H.1
Khalid, M.2
Heigele, A.3
Schmökel, J.4
Usmani, S.M.5
van der Merwe, J.6
Münch, J.7
Silvestri, G.8
Kirchhoff, F.9
|