메뉴 건너뛰기




Volumn 258, Issue , 2017, Pages 33-40

Development of a single-cell GlxR-based cAMP biosensor for Corynebacterium glutamicum

Author keywords

Biosensor; cAMP; Corynebacterium glutamicum; FACS; GlxR

Indexed keywords

BIOCHEMISTRY; ENZYMES; FLOW CYTOMETRY; GENE EXPRESSION;

EID: 85023599653     PISSN: 01681656     EISSN: 18734863     Source Type: Journal    
DOI: 10.1016/j.jbiotec.2017.07.004     Document Type: Article
Times cited : (16)

References (52)
  • 2
    • 79951471277 scopus 로고    scopus 로고
    • Cyclic AMP signalling in mycobacteria: redirecting the conversation with a common currency
    • Bai, G., Knapp, G.S., McDonough, K.A., Cyclic AMP signalling in mycobacteria: redirecting the conversation with a common currency. Cell Microbiol. 13 (2011), 349–358.
    • (2011) Cell Microbiol. , vol.13 , pp. 349-358
    • Bai, G.1    Knapp, G.S.2    McDonough, K.A.3
  • 3
    • 84891350474 scopus 로고    scopus 로고
    • IpsA, a novel LacI-type regulator, is required for inositol-derived lipid formation in Corynebacteria and Mycobacteria
    • Baumgart, M., Luder, K., Grover, S., Gätgens, C., Besra, G.S., Frunzke, J., IpsA, a novel LacI-type regulator, is required for inositol-derived lipid formation in Corynebacteria and Mycobacteria. BMC Biol., 11, 2013, 122.
    • (2013) BMC Biol. , vol.11 , pp. 122
    • Baumgart, M.1    Luder, K.2    Grover, S.3    Gätgens, C.4    Besra, G.S.5    Frunzke, J.6
  • 4
    • 84864801619 scopus 로고    scopus 로고
    • Bio-based production of chemicals, materials and fuels—Corynebacterium glutamicum as versatile cell factory
    • Becker, J., Wittmann, C., Bio-based production of chemicals, materials and fuels—Corynebacterium glutamicum as versatile cell factory. Curr. Opin. Biotechnol. 23 (2012), 631–640.
    • (2012) Curr. Opin. Biotechnol. , vol.23 , pp. 631-640
    • Becker, J.1    Wittmann, C.2
  • 7
    • 57349158325 scopus 로고    scopus 로고
    • Corynebacteria: Genomics and Molecular Biology
    • Caister Academic Press Norfolk, U.K
    • Burkovski, A., Corynebacteria: Genomics and Molecular Biology. 2008, Caister Academic Press, Norfolk, U.K.
    • (2008)
    • Burkovski, A.1
  • 8
    • 84933540450 scopus 로고    scopus 로고
    • Corynebacterium glutamicum−From Systems Biology to Biotechnological Applications
    • Caister Academic Press Norfolk, U.K
    • Burkovski, A., Corynebacterium glutamicum−From Systems Biology to Biotechnological Applications. 2015, Caister Academic Press, Norfolk, U.K.
    • (2015)
    • Burkovski, A.1
  • 9
    • 76649124874 scopus 로고    scopus 로고
    • Characterization of an adenylate cyclase gene (cyaB) deletion mutant of Corynebacterium glutamicum ATCC 13032
    • Cha, P.H., Park, S.Y., Moon, M.W., Subhadra, B., Oh, T.K., Kim, E., Kim, J.F., Lee, J.K., Characterization of an adenylate cyclase gene (cyaB) deletion mutant of Corynebacterium glutamicum ATCC 13032. Appl. Microbiol. Biotechnol. 85 (2010), 1061–1068.
    • (2010) Appl. Microbiol. Biotechnol. , vol.85 , pp. 1061-1068
    • Cha, P.H.1    Park, S.Y.2    Moon, M.W.3    Subhadra, B.4    Oh, T.K.5    Kim, E.6    Kim, J.F.7    Lee, J.K.8
  • 10
    • 85057684864 scopus 로고    scopus 로고
    • Handbook of Corynebacterium glutamicum
    • CRC Press, Taylor & Francis Group Boca Raton Florida, USA
    • Eggeling, L., Bott, M., Handbook of Corynebacterium glutamicum. 2005, CRC Press, Taylor & Francis Group Boca Raton, Florida, USA.
    • (2005)
    • Eggeling, L.1    Bott, M.2
  • 11
    • 84939986248 scopus 로고    scopus 로고
    • A giant market and a powerful metabolism: L-lysine provided by Corynebacterium glutamicum
    • Eggeling, L., Bott, M., A giant market and a powerful metabolism: L-lysine provided by Corynebacterium glutamicum. Appl. Microbiol. Biotechnol. 99 (2015), 3387–3394.
    • (2015) Appl. Microbiol. Biotechnol. , vol.99 , pp. 3387-3394
    • Eggeling, L.1    Bott, M.2
  • 13
    • 0020959710 scopus 로고
    • Studies on transformation of Escherichia coli with plasmids
    • Hanahan, D., Studies on transformation of Escherichia coli with plasmids. J. Mol. Biol. 166 (1983), 557–580.
    • (1983) J. Mol. Biol. , vol.166 , pp. 557-580
    • Hanahan, D.1
  • 14
    • 84873966152 scopus 로고    scopus 로고
    • Destabilized eYFP variants for dynamic gene expression studies in Corynebacterium glutamicum
    • Hentschel, E., Will, C., Mustafi, N., Burkovski, A., Rehm, N., Frunzke, J., Destabilized eYFP variants for dynamic gene expression studies in Corynebacterium glutamicum. Microb. Biotechnol. 6 (2013), 196–201.
    • (2013) Microb. Biotechnol. , vol.6 , pp. 196-201
    • Hentschel, E.1    Will, C.2    Mustafi, N.3    Burkovski, A.4    Rehm, N.5    Frunzke, J.6
  • 15
    • 84898651997 scopus 로고    scopus 로고
    • Role of Corynebacterium glutamicum sprA encoding a serine protease in glxR-mediated global gene regulation
    • Hong, E.J., Park, J.S., Kim, Y., Lee, H.S., Role of Corynebacterium glutamicum sprA encoding a serine protease in glxR-mediated global gene regulation. PLoS One, 9, 2014, e93587.
    • (2014) PLoS One , vol.9 , pp. e93587
    • Hong, E.J.1    Park, J.S.2    Kim, Y.3    Lee, H.S.4
  • 16
    • 0032774281 scopus 로고    scopus 로고
    • Construction and application of new Corynebacterium glutamicum vectors
    • Jakoby, M., Ngouoto-Nkili, C.E., Burkovski, A., Construction and application of new Corynebacterium glutamicum vectors. Biotechnol. Techn. 13 (1999), 437–441.
    • (1999) Biotechnol. Techn. , vol.13 , pp. 437-441
    • Jakoby, M.1    Ngouoto-Nkili, C.E.2    Burkovski, A.3
  • 18
    • 41049088235 scopus 로고    scopus 로고
    • Triple transcriptional control of the resuscitation promoting factor 2 (rpf2) gene of Corynebacterium glutamicum by the regulators of acetate metabolism RamA and RamB and the cAMP-dependent regulator GlxR
    • Jungwirth, B., Emer, D., Brune, I., Hansmeier, N., Pühler, A., Eikmanns, B.J., Tauch, A., Triple transcriptional control of the resuscitation promoting factor 2 (rpf2) gene of Corynebacterium glutamicum by the regulators of acetate metabolism RamA and RamB and the cAMP-dependent regulator GlxR. FEMS Microbiol. Lett. 281 (2008), 190–197.
    • (2008) FEMS Microbiol. Lett. , vol.281 , pp. 190-197
    • Jungwirth, B.1    Emer, D.2    Brune, I.3    Hansmeier, N.4    Pühler, A.5    Eikmanns, B.J.6    Tauch, A.7
  • 19
    • 84871689556 scopus 로고    scopus 로고
    • High-resolution detection of DNA binding sites of the global transcriptional regulator GlxR in Corynebacterium glutamicum
    • Jungwirth, B., Sala, C., Kohl, T.A., Uplekar, S., Baumbach, J., Cole, S.T., Pühler, A., Tauch, A., High-resolution detection of DNA binding sites of the global transcriptional regulator GlxR in Corynebacterium glutamicum. Microbiology 159 (2013), 12–22.
    • (2013) Microbiology , vol.159 , pp. 12-22
    • Jungwirth, B.1    Sala, C.2    Kohl, T.A.3    Uplekar, S.4    Baumbach, J.5    Cole, S.T.6    Pühler, A.7    Tauch, A.8
  • 21
    • 84975506761 scopus 로고    scopus 로고
    • Construction of a Corynebacterium glutamicum platform strain for the production of stilbenes and (2S)-flavanones
    • Kallscheuer, N., Vogt, M., Stenzel, A., Gätgens, J., Bott, M., Marienhagen, J., Construction of a Corynebacterium glutamicum platform strain for the production of stilbenes and (2S)-flavanones. Metab. Eng. 38 (2016), 47–55.
    • (2016) Metab. Eng. , vol.38 , pp. 47-55
    • Kallscheuer, N.1    Vogt, M.2    Stenzel, A.3    Gätgens, J.4    Bott, M.5    Marienhagen, J.6
  • 22
    • 0027164654 scopus 로고
    • Isoleucine synthesis in Corynebacterium glutamicum: molecular analysis of the ilvB-ilvN-ilvC operon
    • Keilhauer, C., Eggeling, L., Sahm, H., Isoleucine synthesis in Corynebacterium glutamicum: molecular analysis of the ilvB-ilvN-ilvC operon. J. Bacteriol. 175 (1993), 5595–5603.
    • (1993) J. Bacteriol. , vol.175 , pp. 5595-5603
    • Keilhauer, C.1    Eggeling, L.2    Sahm, H.3
  • 23
    • 2442689180 scopus 로고    scopus 로고
    • Identification and characterization of glxR, a gene involved in regulation of glyoxylate bypass in Corynebacterium glutamicum
    • Kim, H.J., Kim, T.H., Kim, Y., Lee, H.S., Identification and characterization of glxR, a gene involved in regulation of glyoxylate bypass in Corynebacterium glutamicum. J. Bacteriol. 186 (2004), 3453–3460.
    • (2004) J. Bacteriol. , vol.186 , pp. 3453-3460
    • Kim, H.J.1    Kim, T.H.2    Kim, Y.3    Lee, H.S.4
  • 24
    • 85008095806 scopus 로고
    • Studies on amino acid fermentation. Part I. Production of L-glutamic acid by various microorganisms
    • Kinoshita, S., Udaka, S., Shimono, M., Studies on amino acid fermentation. Part I. Production of L-glutamic acid by various microorganisms. J. Gen. Appl. Microbiol. 3 (1957), 193–205.
    • (1957) J. Gen. Appl. Microbiol. , vol.3 , pp. 193-205
    • Kinoshita, S.1    Udaka, S.2    Shimono, M.3
  • 25
    • 70249139791 scopus 로고    scopus 로고
    • The GlxR regulon of the amino acid producer Corynebacterium glutamicum: Detection of the corynebacterial core regulon and integration into the transcriptional regulatory network model
    • Kohl, T.A., Tauch, A., The GlxR regulon of the amino acid producer Corynebacterium glutamicum: Detection of the corynebacterial core regulon and integration into the transcriptional regulatory network model. J. Biotechnol. 143 (2009), 239–246.
    • (2009) J. Biotechnol. , vol.143 , pp. 239-246
    • Kohl, T.A.1    Tauch, A.2
  • 26
    • 47249147911 scopus 로고    scopus 로고
    • The GlxR regulon of the amino acid producer Corynebacterium glutamicum: in silico and in vitro detection of DNA binding sites of a global transcription regulator
    • Kohl, T.A., Baumbach, J., Jungwirth, B., Pühler, A., Tauch, A., The GlxR regulon of the amino acid producer Corynebacterium glutamicum: in silico and in vitro detection of DNA binding sites of a global transcription regulator. J. Biotechnol. 135 (2008), 340–350.
    • (2008) J. Biotechnol. , vol.135 , pp. 340-350
    • Kohl, T.A.1    Baumbach, J.2    Jungwirth, B.3    Pühler, A.4    Tauch, A.5
  • 27
    • 0027236999 scopus 로고
    • Transcriptional regulation by cAMP and its receptor protein
    • Kolb, A., Busby, S., Buc, H., Garges, S., Adhya, S., Transcriptional regulation by cAMP and its receptor protein. Annu. Rev. Biochem. 62 (1993), 749–795.
    • (1993) Annu. Rev. Biochem. , vol.62 , pp. 749-795
    • Kolb, A.1    Busby, S.2    Buc, H.3    Garges, S.4    Adhya, S.5
  • 28
    • 84923516258 scopus 로고    scopus 로고
    • A chromosomally encoded T7 RNA polymerase-dependent gene expression system for Corynebacterium glutamicum: construction and comparative evaluation at the single-cell level
    • Kortmann, M., Kuhl, V., Klaffl, S., Bott, M., A chromosomally encoded T7 RNA polymerase-dependent gene expression system for Corynebacterium glutamicum: construction and comparative evaluation at the single-cell level. Microb. Biotechnol. 8 (2015), 253–265.
    • (2015) Microb. Biotechnol. , vol.8 , pp. 253-265
    • Kortmann, M.1    Kuhl, V.2    Klaffl, S.3    Bott, M.4
  • 30
    • 84952978551 scopus 로고    scopus 로고
    • Transcription factor-based biosensors in biotechnology: current state and future prospects
    • Mahr, R., Frunzke, J., Transcription factor-based biosensors in biotechnology: current state and future prospects. Appl. Microbiol. Biotechnol. 100 (2016), 79–90.
    • (2016) Appl. Microbiol. Biotechnol. , vol.100 , pp. 79-90
    • Mahr, R.1    Frunzke, J.2
  • 31
    • 0034005701 scopus 로고    scopus 로고
    • Functional classification of cNMP-binding proteins and nucleotide cyclases with implications for novel regulatory pathways in Mycobacterium tuberculosis
    • McCue, L.A., McDonough, K.A., Lawrence, C.E., Functional classification of cNMP-binding proteins and nucleotide cyclases with implications for novel regulatory pathways in Mycobacterium tuberculosis. Genome Res. 10 (2000), 204–219.
    • (2000) Genome Res. , vol.10 , pp. 204-219
    • McCue, L.A.1    McDonough, K.A.2    Lawrence, C.E.3
  • 35
    • 77149156628 scopus 로고    scopus 로고
    • Functional characterization of the glxR deletion mutant of Corynebacterium glutamicum ATCC 13032: involvement of GlxR in acetate metabolism and carbon catabolite repression
    • Park, S.Y., Moon, M.W., Subhadra, B., Lee, J.K., Functional characterization of the glxR deletion mutant of Corynebacterium glutamicum ATCC 13032: involvement of GlxR in acetate metabolism and carbon catabolite repression. FEMS Microbiol. Lett. 304 (2010), 107–115.
    • (2010) FEMS Microbiol. Lett. , vol.304 , pp. 107-115
    • Park, S.Y.1    Moon, M.W.2    Subhadra, B.3    Lee, J.K.4
  • 36
    • 84940931213 scopus 로고    scopus 로고
    • The genetically encoded tool set for investigating cAMP: more than the sum of its parts
    • Patel, N., Gold, M.G., The genetically encoded tool set for investigating cAMP: more than the sum of its parts. Front. Pharmacol., 6, 2015, 164.
    • (2015) Front. Pharmacol. , vol.6 , pp. 164
    • Patel, N.1    Gold, M.G.2
  • 37
    • 34347397789 scopus 로고    scopus 로고
    • Characterization of citrate utilization in Corynebacterium glutamicum by transcriptome and proteome analysis
    • Polen, T., Schluesener, D., Poetsch, A., Bott, M., Wendisch, V.F., Characterization of citrate utilization in Corynebacterium glutamicum by transcriptome and proteome analysis. FEMS Microbiol. Lett. 273 (2007), 109–119.
    • (2007) FEMS Microbiol. Lett. , vol.273 , pp. 109-119
    • Polen, T.1    Schluesener, D.2    Poetsch, A.3    Bott, M.4    Wendisch, V.F.5
  • 38
    • 0003903343 scopus 로고    scopus 로고
    • Molecular Cloning: A Laboratory Manual
    • 3rd ed. Cold Spring Harbor Laboratory Press Cold Spring Harbor, New York
    • Sambrook, J., Russell, D., Molecular Cloning: A Laboratory Manual. 3rd ed., 2001, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York.
    • (2001)
    • Sambrook, J.1    Russell, D.2
  • 39
    • 0028289983 scopus 로고
    • Small mobilizable multipurpose cloning vectors derived from the Escherichia coli plasmids pK18 and pK19—s: selection of defined deletions in the chromosome of Corynebacterium glutamicum
    • Schäfer, A., Tauch, A., Jäger, W., Kalinowski, J., Thierbach, G., Pühler, A., Small mobilizable multipurpose cloning vectors derived from the Escherichia coli plasmids pK18 and pK19—s: selection of defined deletions in the chromosome of Corynebacterium glutamicum. Gene 145 (1994), 69–73.
    • (1994) Gene , vol.145 , pp. 69-73
    • Schäfer, A.1    Tauch, A.2    Jäger, W.3    Kalinowski, J.4    Thierbach, G.5    Pühler, A.6
  • 40
    • 79959256632 scopus 로고    scopus 로고
    • Biotechnological production of polyamines by bacteria: recent achievements and future perspectives
    • Schneider, J., Wendisch, V.F., Biotechnological production of polyamines by bacteria: recent achievements and future perspectives. Appl. Microbiol. Biotechnol. 91 (2011), 17–30.
    • (2011) Appl. Microbiol. Biotechnol. , vol.91 , pp. 17-30
    • Schneider, J.1    Wendisch, V.F.2
  • 41
    • 85008255923 scopus 로고    scopus 로고
    • Identification of the cAMP phosphodiesterase CpdA as novel key player in cAMP-dependent regulation in Corynebacterium glutamicum
    • Schulte, J., Baumgart, M., Bott, M., Identification of the cAMP phosphodiesterase CpdA as novel key player in cAMP-dependent regulation in Corynebacterium glutamicum. Mol. Microbiol. 103 (2017), 534–552.
    • (2017) Mol. Microbiol. , vol.103 , pp. 534-552
    • Schulte, J.1    Baumgart, M.2    Bott, M.3
  • 42
    • 33750984748 scopus 로고    scopus 로고
    • New messages from old messengers: cAMP and mycobacteria
    • Shenoy, A.R., Visweswariah, S.S., New messages from old messengers: cAMP and mycobacteria. Trends Microbiol. 14 (2006), 543–550.
    • (2006) Trends Microbiol. , vol.14 , pp. 543-550
    • Shenoy, A.R.1    Visweswariah, S.S.2
  • 43
    • 84940189265 scopus 로고    scopus 로고
    • Identification of the regulators binding to the upstream region of glxR in Corynebacterium glutamicum
    • Subhadra, B., Ray, D., Han, J.Y., Bae, K.H., Lee, J.K., Identification of the regulators binding to the upstream region of glxR in Corynebacterium glutamicum. J. Microbiol. Biotechnol. 25 (2015), 1216–1226.
    • (2015) J. Microbiol. Biotechnol. , vol.25 , pp. 1216-1226
    • Subhadra, B.1    Ray, D.2    Han, J.Y.3    Bae, K.H.4    Lee, J.K.5
  • 44
    • 0025330489 scopus 로고
    • cAMP-dependent protein kinase: framework for a diverse family of regulatory enzymes
    • Taylor, S.S., Buechler, J.A., Yonemoto, W., cAMP-dependent protein kinase: framework for a diverse family of regulatory enzymes. Annu. Rev. Biochem. 59 (1990), 971–1005.
    • (1990) Annu. Rev. Biochem. , vol.59 , pp. 971-1005
    • Taylor, S.S.1    Buechler, J.A.2    Yonemoto, W.3
  • 45
    • 84915750400 scopus 로고    scopus 로고
    • The crystal structures of apo and cAMP-bound GlxR from Corynebacterium glutamicum reveal structural and dynamic changes upon cAMP binding in CRP/FNR family transcription factors
    • Townsend, P.D., Jungwirth, B., Pojer, F., Bussmann, M., Money, V.A., Cole, S.T., Pühler, A., Tauch, A., Bott, M., Cann, M.J., Pohl, E., The crystal structures of apo and cAMP-bound GlxR from Corynebacterium glutamicum reveal structural and dynamic changes upon cAMP binding in CRP/FNR family transcription factors. PLoS One, 9, 2014, e113265.
    • (2014) PLoS One , vol.9 , pp. e113265
    • Townsend, P.D.1    Jungwirth, B.2    Pojer, F.3    Bussmann, M.4    Money, V.A.5    Cole, S.T.6    Pühler, A.7    Tauch, A.8    Bott, M.9    Cann, M.J.10    Pohl, E.11
  • 46
    • 63449104706 scopus 로고    scopus 로고
    • Involvement of the LuxR-type transcriptional regulator RamA in regulation of expression of the gapA gene, encoding glyceraldehyde-3-phosphate dehydrogenase of Corynebacterium glutamicum
    • Toyoda, K., Teramoto, H., Inui, M., Yukawa, H., Involvement of the LuxR-type transcriptional regulator RamA in regulation of expression of the gapA gene, encoding glyceraldehyde-3-phosphate dehydrogenase of Corynebacterium glutamicum. J. Bacteriol. 191 (2009), 968–977.
    • (2009) J. Bacteriol. , vol.191 , pp. 968-977
    • Toyoda, K.1    Teramoto, H.2    Inui, M.3    Yukawa, H.4
  • 47
    • 79961140871 scopus 로고    scopus 로고
    • Genome-wide identification of in vivo binding sites of GlxR, a cyclic AMP receptor protein-type regulator in Corynebacterium glutamicum
    • Toyoda, K., Teramoto, H., Inui, M., Yukawa, H., Genome-wide identification of in vivo binding sites of GlxR, a cyclic AMP receptor protein-type regulator in Corynebacterium glutamicum. J. Bacteriol. 193 (2011), 4123–4133.
    • (2011) J. Bacteriol. , vol.193 , pp. 4123-4133
    • Toyoda, K.1    Teramoto, H.2    Inui, M.3    Yukawa, H.4
  • 48
    • 0031663369 scopus 로고    scopus 로고
    • The green fluorescent protein
    • Tsien, R.Y., The green fluorescent protein. Annu. Rev. Biochem. 67 (1998), 509–544.
    • (1998) Annu. Rev. Biochem. , vol.67 , pp. 509-544
    • Tsien, R.Y.1
  • 49
    • 84928727000 scopus 로고    scopus 로고
    • Bioprocess automation on a Mini Pilot Plant enables fast quantitative microbial phenotyping
    • Unthan, S., Radek, A., Wiechert, W., Oldiges, M., Noack, S., Bioprocess automation on a Mini Pilot Plant enables fast quantitative microbial phenotyping. Microb. cell fact., 14, 2015, 32.
    • (2015) Microb. cell fact. , vol.14 , pp. 32
    • Unthan, S.1    Radek, A.2    Wiechert, W.3    Oldiges, M.4    Noack, S.5
  • 51
    • 84873978248 scopus 로고    scopus 로고
    • Bio-based production of organic acids with Corynebacterium glutamicum
    • Wieschalka, S., Blombach, B., Bott, M., Eikmanns, B.J., Bio-based production of organic acids with Corynebacterium glutamicum. Microb. Biotechnol. 6 (2013), 87–102.
    • (2013) Microb. Biotechnol. , vol.6 , pp. 87-102
    • Wieschalka, S.1    Blombach, B.2    Bott, M.3    Eikmanns, B.J.4
  • 52
    • 84878385985 scopus 로고    scopus 로고
    • Corynebacterium glutamicum: Biology and Biotechnology
    • A. Steinbüchel Springer Heidelberg
    • Yukawa, H., Inui, M., Corynebacterium glutamicum: Biology and Biotechnology. Steinbüchel, A., (eds.) Microbiology Monographs, 2013, Springer, Heidelberg.
    • (2013) Microbiology Monographs
    • Yukawa, H.1    Inui, M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.