-
2
-
-
0025183708
-
Basic local alignment search to
-
Altschul, S.F., Gish, W., Miller, W., Myers, E.W. and Lipman, D.J. (1990) Basic local alignment search tool. J. Mol. Biol. 215, 403–410.
-
(1990)
J. Mol. Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
3
-
-
51649150815
-
Nuclear DNA content of some important plant speci
-
Arumuganathan, K. and Earle, E.D. (1991) Nuclear DNA content of some important plant species. Plant Mol. Biol. Rep. 9, 211–215.
-
(1991)
Plant Mol. Biol. Rep.
, vol.9
, pp. 211-215
-
-
Arumuganathan, K.1
Earle, E.D.2
-
4
-
-
84938890107
-
High-resolution skim genotyping by sequencing reveals the distribution of crossovers and gene conversions in Cicer arietinum and Brassica nap
-
Bayer, P.E., Ruperao, P., Mason, A.S., Stiller, J., Chan, C.-K.K., Hayashi, S., Long, Y. et al. (2015) High-resolution skim genotyping by sequencing reveals the distribution of crossovers and gene conversions in Cicer arietinum and Brassica napus. Theor. Appl. Genet. 128, 1039–1047.
-
(2015)
Theor. Appl. Genet.
, vol.128
, pp. 1039-1047
-
-
Bayer, P.E.1
Ruperao, P.2
Mason, A.S.3
Stiller, J.4
Chan, C.-K.K.5
Hayashi, S.6
Long, Y.7
-
5
-
-
84872043258
-
-
Brown, C.T., Howe, A., Zhang, Q., Pyrkosz, A.B. and Brom, T.H. (2012) A Reference-Free Algorithm for Computational Normalization of Shotgun Sequencing Data. http://arxiv.org/abs/1203.4802.
-
(2012)
A Reference-Free Algorithm for Computational Normalization of Shotgun Sequencing Data
-
-
Brown, C.T.1
Howe, A.2
Zhang, Q.3
Pyrkosz, A.B.4
Brom, T.H.5
-
6
-
-
84910090818
-
A complex recombination pattern in the genome of allotetraploid Brassica napus as revealed by a high-density genetic Map ed. H. Cande
-
Cai, G., Yang, Q., Yi, B., Fan, C., Edwards, D., Batley, J., Zhou, Y. et al. (2014) A complex recombination pattern in the genome of allotetraploid Brassica napus as revealed by a high-density genetic Map ed. H. Candela. PLoS One, 9, e109910.
-
(2014)
PLoS One
, vol.9
-
-
Cai, G.1
Yang, Q.2
Yi, B.3
Fan, C.4
Edwards, D.5
Batley, J.6
Zhou, Y.7
-
7
-
-
38049057159
-
MAKER: an easy-to-use annotation pipeline designed for emerging model organism genom
-
Cantarel, B.L., Korf, I., Robb, S.M.C., Parra, G., Ross, E., Moore, B., Holt, C. et al. (2008) MAKER: an easy-to-use annotation pipeline designed for emerging model organism genomes. Genome Res. 18, 188–196.
-
(2008)
Genome Res.
, vol.18
, pp. 188-196
-
-
Cantarel, B.L.1
Korf, I.2
Robb, S.M.C.3
Parra, G.4
Ross, E.5
Moore, B.6
Holt, C.7
-
8
-
-
84906689347
-
Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed geno
-
Chalhoub, B., Denoeud, F., Liu, S., Parkin, I.A.P., Tang, H., Wang, X., Chiquet, J. et al. (2014) Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome. Science, 345, 950–953.
-
(2014)
Science
, vol.345
, pp. 950-953
-
-
Chalhoub, B.1
Denoeud, F.2
Liu, S.3
Parkin, I.A.P.4
Tang, H.5
Wang, X.6
Chiquet, J.7
-
9
-
-
84982129468
-
Subgenome parallel selection is associated with morphotype diversification and convergent crop domestication in Brassica rapa and Brassica olerac
-
Cheng, F., Sun, R., Hou, X., Zheng, H., Zhang, F., Zhang, Y., Liu, B. et al. (2016) Subgenome parallel selection is associated with morphotype diversification and convergent crop domestication in Brassica rapa and Brassica oleracea. Nat. Genet. 1–10.
-
(2016)
Nat. Genet.
, pp. 1-10
-
-
Cheng, F.1
Sun, R.2
Hou, X.3
Zheng, H.4
Zhang, F.5
Zhang, Y.6
Liu, B.7
-
10
-
-
85091137006
-
The khmer software package: enabling efficient nucleotide sequence analys
-
Crusoe, M.R., Alameldin, H.F., Awad, S., Boucher, E., Caldwell, A., Cartwright, R., Charbonneau, A. et al. (2015) The khmer software package: enabling efficient nucleotide sequence analysis. F1000Research, 4, 900.
-
(2015)
F1000Research
, vol.4
, pp. 900
-
-
Crusoe, M.R.1
Alameldin, H.F.2
Awad, S.3
Boucher, E.4
Caldwell, A.5
Cartwright, R.6
Charbonneau, A.7
-
11
-
-
84871906959
-
Accessing complex crop genomes with next-generation sequenci
-
Edwards, D., Batley, J. and Snowdon, R.J. (2013) Accessing complex crop genomes with next-generation sequencing. Theor. Appl. Genet. 126, 1–11.
-
(2013)
Theor. Appl. Genet.
, vol.126
, pp. 1-11
-
-
Edwards, D.1
Batley, J.2
Snowdon, R.J.3
-
12
-
-
0000036472
-
Molecular tagging of the dwarf BREIZH (Bzh) gene in Brassica nap
-
Foisset, N., Delourme, R., Barret, P. and Renard, M. (1995) Molecular tagging of the dwarf BREIZH (Bzh) gene in Brassica napus. Theor. Appl. Genet. 91, 756–761.
-
(1995)
Theor. Appl. Genet.
, vol.91
, pp. 756-761
-
-
Foisset, N.1
Delourme, R.2
Barret, P.3
Renard, M.4
-
14
-
-
84925514063
-
Gene loss in the fungal canola pathogen Leptosphaeria macula
-
Golicz, A.A., Martinez, P.A., Zander, M., Patel, D.A., Van De Wouw, A.P., Visendi, P., Fitzgerald, T.L. et al. (2014) Gene loss in the fungal canola pathogen Leptosphaeria maculans. Funct. Integr. Genomics, 15, 189–196.
-
(2014)
Funct. Integr. Genomics
, vol.15
, pp. 189-196
-
-
Golicz, A.A.1
Martinez, P.A.2
Zander, M.3
Patel, D.A.4
Van De Wouw, A.P.5
Visendi, P.6
Fitzgerald, T.L.7
-
15
-
-
84961213710
-
Towards plant pangenomi
-
Golicz, A.A., Batley, J. and Edwards, D. (2016a) Towards plant pangenomics. Plant Biotechnol. J. 14, 1099–1105.
-
(2016)
Plant Biotechnol. J.
, vol.14
, pp. 1099-1105
-
-
Golicz, A.A.1
Batley, J.2
Edwards, D.3
-
16
-
-
84995460932
-
The pangenome of an agronomically important crop plant Brassica olerac
-
Golicz, A.A., Bayer, P.E., Barker, G.C., Edger, P.P., Kim, H., Martinez, P.A., Chan, C.K.K. et al. (2016b) The pangenome of an agronomically important crop plant Brassica oleracea. Nat. Commun. 7, 13390.
-
(2016)
Nat. Commun.
, vol.7
, pp. 13390
-
-
Golicz, A.A.1
Bayer, P.E.2
Barker, G.C.3
Edger, P.P.4
Kim, H.5
Martinez, P.A.6
Chan, C.K.K.7
-
18
-
-
84871881613
-
SNP discovery and applications in Brassica nap
-
Hayward, A., Mason, A.S., Dalton-Morgan, J., Zander, M., Edwards, D. and Batley, J. (2012) SNP discovery and applications in Brassica napus. J. Plant Biotechnol. 39, 49–61.
-
(2012)
J. Plant Biotechnol.
, vol.39
, pp. 49-61
-
-
Hayward, A.1
Mason, A.S.2
Dalton-Morgan, J.3
Zander, M.4
Edwards, D.5
Batley, J.6
-
19
-
-
0035197244
-
The Arabidopsis SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 gene is expressed in developing ovules and embryos and enhances embryogenic competence in cultu
-
Hecht, V., Vielle-Calzada, J.P., Hartog, M.V., Schmidt, E.D., Boutilier, K., Grossniklaus, U. and de Vries, S.C. (2001) The Arabidopsis SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 gene is expressed in developing ovules and embryos and enhances embryogenic competence in culture. Plant Physiol. 127, 803–816.
-
(2001)
Plant Physiol.
, vol.127
, pp. 803-816
-
-
Hecht, V.1
Vielle-Calzada, J.P.2
Hartog, M.V.3
Schmidt, E.D.4
Boutilier, K.5
Grossniklaus, U.6
de Vries, S.C.7
-
20
-
-
84862231139
-
Use of mRNA-seq to discriminate contributions to the transcriptome from the constituent genomes of the polyploid crop species Brassica nap
-
Higgins, J., Magusin, A., Trick, M., Fraser, F. and Bancroft, I. (2012) Use of mRNA-seq to discriminate contributions to the transcriptome from the constituent genomes of the polyploid crop species Brassica napus. BMC Genom. 13, 247.
-
(2012)
BMC Genom.
, vol.13
, pp. 247
-
-
Higgins, J.1
Magusin, A.2
Trick, M.3
Fraser, F.4
Bancroft, I.5
-
21
-
-
84896808010
-
Insights into the maize pan-genome and pan-transcripto
-
Hirsch, C.N., Foerster, J.M., Johnson, J.M., Sekhon, R.S., Muttoni, G., Vaillancourt, B., Peñagaricano, F. et al. (2014) Insights into the maize pan-genome and pan-transcriptome. Plant Cell, 26, 121–135.
-
(2014)
Plant Cell
, vol.26
, pp. 121-135
-
-
Hirsch, C.N.1
Foerster, J.M.2
Johnson, J.M.3
Sekhon, R.S.4
Muttoni, G.5
Vaillancourt, B.6
Peñagaricano, F.7
-
23
-
-
79952614033
-
A novel hybrid gene prediction method employing protein multiple sequence alignmen
-
Keller, O., Kollmar, M., Stanke, M. and Waack, S. (2011) A novel hybrid gene prediction method employing protein multiple sequence alignments. Bioinformatics, 27, 757–763.
-
(2011)
Bioinformatics
, vol.27
, pp. 757-763
-
-
Keller, O.1
Kollmar, M.2
Stanke, M.3
Waack, S.4
-
24
-
-
84876996918
-
TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusio
-
Kim, D., Pertea, G., Trapnell, C., Pimentel, H., Kelley, R. and Salzberg, S.L. (2013) TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions. Genome Biol. 14, R36.
-
(2013)
Genome Biol.
, vol.14
, pp. R36
-
-
Kim, D.1
Pertea, G.2
Trapnell, C.3
Pimentel, H.4
Kelley, R.5
Salzberg, S.L.6
-
25
-
-
84859210032
-
Fast gapped-read alignment with Bowti
-
Langmead, B. and Salzberg, S.L. (2012) Fast gapped-read alignment with Bowtie 2. Nat. Methods, 9, 357–359.
-
(2012)
Nat. Methods
, vol.9
, pp. 357-359
-
-
Langmead, B.1
Salzberg, S.L.2
-
26
-
-
62349130698
-
Ultrafast and memory-efficient alignment of short DNA sequences to the human geno
-
Langmead, B., Trapnell, C., Pop, M. and Salzberg, S.L. (2009) Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol. 10, R25.
-
(2009)
Genome Biol.
, vol.10
, pp. R25
-
-
Langmead, B.1
Trapnell, C.2
Pop, M.3
Salzberg, S.L.4
-
27
-
-
68549104404
-
The sequence alignment/map format and SAMtoo
-
Li, H., Handsaker, B., Wysoker, A., Fennell, T., Ruan, J., Homer, N., Marth, G. et al. (2009) The sequence alignment/map format and SAMtools. Bioinformatics, 25, 2078–2079.
-
(2009)
Bioinformatics
, vol.25
, pp. 2078-2079
-
-
Li, H.1
Handsaker, B.2
Wysoker, A.3
Fennell, T.4
Ruan, J.5
Homer, N.6
Marth, G.7
-
28
-
-
84902986004
-
Beyond genomic variation–comparison and functional annotation of three Brassica rapa genomes: a turnip, a rapid cycling and a Chinese cabba
-
Lin, K., Zhang, N., Severing, E.I., Nijveen, H., Cheng, F., Visser, R.G.F., Wang, X. et al. (2014) Beyond genomic variation–comparison and functional annotation of three Brassica rapa genomes: a turnip, a rapid cycling and a Chinese cabbage. BMC Genom. 15, 250.
-
(2014)
BMC Genom.
, vol.15
, pp. 250
-
-
Lin, K.1
Zhang, N.2
Severing, E.I.3
Nijveen, H.4
Cheng, F.5
Visser, R.G.F.6
Wang, X.7
-
29
-
-
84901467202
-
The Brassica oleracea genome reveals the asymmetrical evolution of polyploid genom
-
Liu, S., Liu, Y., Yang, X., Tong, C., Edwards, D., Parkin, I.A.P., Zhao, M. et al. (2014) The Brassica oleracea genome reveals the asymmetrical evolution of polyploid genomes. Nat. Commun. 5, 3930.
-
(2014)
Nat. Commun.
, vol.5
, pp. 3930
-
-
Liu, S.1
Liu, Y.2
Yang, X.3
Tong, C.4
Edwards, D.5
Parkin, I.A.P.6
Zhao, M.7
-
30
-
-
84871914205
-
Discovery of single nucleotide polymorphisms in complex genomes using SGSautoS
-
Lorenc, M.T., Hayashi, S., Stiller, J., Lee, H., Manoli, S., Ruperao, P., Visendi, P. et al. (2012) Discovery of single nucleotide polymorphisms in complex genomes using SGSautoSNP. Biology (Basel), 1, 370–382.
-
(2012)
Biology (Basel)
, vol.1
, pp. 370-382
-
-
Lorenc, M.T.1
Hayashi, S.2
Stiller, J.3
Lee, H.4
Manoli, S.5
Ruperao, P.6
Visendi, P.7
-
31
-
-
17844379449
-
Chromosome triplication found across the tribe Brassice
-
Lysak, M.A., Koch, M.A., Pecinka, A. and Schubert, I. (2005) Chromosome triplication found across the tribe Brassiceae. Genome Res. 15, 516–525.
-
(2005)
Genome Res.
, vol.15
, pp. 516-525
-
-
Lysak, M.A.1
Koch, M.A.2
Pecinka, A.3
Schubert, I.4
-
32
-
-
0000150298
-
Genome analysis in Brassica with special reference to the experimental formation of B. napus and peculiar mode of fertilizati
-
Nagaharu, U. (1935) Genome analysis in Brassica with special reference to the experimental formation of B. napus and peculiar mode of fertilization. Jpn. J. Bot. 7, 389–452.
-
(1935)
Jpn. J. Bot.
, vol.7
, pp. 389-452
-
-
Nagaharu, U.1
-
33
-
-
84876532610
-
Database resources of the national center for biotechnology informati
-
NCBI Resource Coordinators (2013) Database resources of the national center for biotechnology information. Nucleic Acids Res. 41, D8–D20.
-
(2013)
Nucleic Acids Res.
, vol.41
, pp. D8-D20
-
-
-
34
-
-
34247866424
-
Homeologous recombination plays a major role in chromosome rearrangements that occur during meiosis of Brassica napus haploi
-
Nicolas, S.D., Le Mignon, G., Eber, F., Coriton, O., Monod, H., Clouet, V., Huteau, V. et al. (2007) Homeologous recombination plays a major role in chromosome rearrangements that occur during meiosis of Brassica napus haploids. Genetics, 175, 487–503.
-
(2007)
Genetics
, vol.175
, pp. 487-503
-
-
Nicolas, S.D.1
Le Mignon, G.2
Eber, F.3
Coriton, O.4
Monod, H.5
Clouet, V.6
Huteau, V.7
-
35
-
-
44849084901
-
Standardized gene nomenclature for the Brassica gen
-
Østergaard, L., King, G.J., Liljegren, S., Roeder, A., Kempin, S., Gremski, K., Østergaard, L. et al. (2008) Standardized gene nomenclature for the Brassica genus. Plant Methods, 4, 10.
-
(2008)
Plant Methods
, vol.4
, pp. 10
-
-
Østergaard, L.1
King, G.J.2
Liljegren, S.3
Roeder, A.4
Kempin, S.5
Gremski, K.6
Østergaard, L.7
-
36
-
-
84905978616
-
Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid Brassica olerac
-
Parkin, I.A., Koh, C., Tang, H., Robinson, S.J., Kagale, S., Clarke, W.E., Town, C.D. et al. (2014) Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid Brassica oleracea. Genome Biol. 15, R77.
-
(2014)
Genome Biol.
, vol.15
, pp. R77
-
-
Parkin, I.A.1
Koh, C.2
Tang, H.3
Robinson, S.J.4
Kagale, S.5
Clarke, W.E.6
Town, C.D.7
-
37
-
-
34249848751
-
CEGMA: a pipeline to accurately annotate core genes in eukaryotic genom
-
Parra, G., Bradnam, K. and Korf, I. (2007) CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes. Bioinformatics, 23, 1061–1067.
-
(2007)
Bioinformatics
, vol.23
, pp. 1061-1067
-
-
Parra, G.1
Bradnam, K.2
Korf, I.3
-
38
-
-
77951770756
-
BEDTools: a flexible suite of utilities for comparing genomic featur
-
Quinlan, A.R. and Hall, I.M. (2010) BEDTools: a flexible suite of utilities for comparing genomic features. Bioinformatics, 26, 841–842.
-
(2010)
Bioinformatics
, vol.26
, pp. 841-842
-
-
Quinlan, A.R.1
Hall, I.M.2
-
39
-
-
79961135005
-
-
Vienna, Austria, the R Foundation for Statistical Computin
-
R Development Core Team (2011) R: A Language and Environment for Statistical Computing. Vienna, Austria: the R Foundation for Statistical Computing ISBN: 3-900051-07-0. http://www.R-project.org/.
-
(2011)
R: A Language and Environment for Statistical Computing
-
-
-
40
-
-
84871946825
-
Streaming fragment assignment for real-time analysis of sequencing experimen
-
Roberts, A. and Pachter, L. (2012) Streaming fragment assignment for real-time analysis of sequencing experiments. Nat. Methods, 10, 71–73.
-
(2012)
Nat. Methods
, vol.10
, pp. 71-73
-
-
Roberts, A.1
Pachter, L.2
-
41
-
-
84905107176
-
Structural variations in plant genom
-
Saxena, R.K., Edwards, D. and Varshney, R.K. (2014) Structural variations in plant genomes. Brief Funct. Genomics, 13, 296–307.
-
(2014)
Brief Funct. Genomics
, vol.13
, pp. 296-307
-
-
Saxena, R.K.1
Edwards, D.2
Varshney, R.K.3
-
42
-
-
84965187491
-
Whole genome de novo assemblies of three divergent strains of rice, Oryza sativa, document novel gene space of aus and indi
-
Schatz, M.C., Maron, L.G., Stein, J.C., Hernandez Wences, A., Gurtowski, J., Biggers, E., Lee, H. et al. (2014) Whole genome de novo assemblies of three divergent strains of rice, Oryza sativa, document novel gene space of aus and indica. Genome Biol. 15, 506.
-
(2014)
Genome Biol.
, vol.15
, pp. 506
-
-
Schatz, M.C.1
Maron, L.G.2
Stein, J.C.3
Hernandez Wences, A.4
Gurtowski, J.5
Biggers, E.6
Lee, H.7
-
43
-
-
0043074509
-
Mapping the mosaic of ancestral genotypes in a cultivar of oilseed rape (Brassica napus) selected via pedigree breedi
-
Sharpe, A.G. and Lydiate, D.J. (2003) Mapping the mosaic of ancestral genotypes in a cultivar of oilseed rape (Brassica napus) selected via pedigree breeding. Genome, 46, 461–468.
-
(2003)
Genome
, vol.46
, pp. 461-468
-
-
Sharpe, A.G.1
Lydiate, D.J.2
-
44
-
-
84940907209
-
BUSCO: assessing genome assembly and annotation completeness with single-copy ortholo
-
Simão, F.A., Waterhouse, R.M., Ioannidis, P., Kriventseva, E.V. and Zdobnov, E.M. (2015) BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs. Bioinformatics, 31, 3210–3212.
-
(2015)
Bioinformatics
, vol.31
, pp. 3210-3212
-
-
Simão, F.A.1
Waterhouse, R.M.2
Ioannidis, P.3
Kriventseva, E.V.4
Zdobnov, E.M.5
-
45
-
-
84955255622
-
Whole genome re-sequencing reveals genome-wide variations among parental lines of 16 mapping populations in chickpea (Cicer arietinum L
-
Thudi, M., Khan, A.W., Kumar, V., Gaur, P.M., Katta, K., Garg, V., Roorkiwal, M. et al. (2016) Whole genome re-sequencing reveals genome-wide variations among parental lines of 16 mapping populations in chickpea (Cicer arietinum L.). BMC Plant Biol. 16(Suppl 1), 10.
-
(2016)
BMC Plant Biol.
, vol.16
, pp. 10
-
-
Thudi, M.1
Khan, A.W.2
Kumar, V.3
Gaur, P.M.4
Katta, K.5
Garg, V.6
Roorkiwal, M.7
-
46
-
-
84863579429
-
Identification and characterization of candidate Rlm4 blackleg resistance genes in Brassica napus using next-generation sequenci
-
Tollenaere, R., Hayward, A., Dalton-Morgan, J., Campbell, E., Lee, J.R., Lorenc, M.T., Manoli, S. et al. (2012) Identification and characterization of candidate Rlm4 blackleg resistance genes in Brassica napus using next-generation sequencing. Plant Biotechnol. J. 10, 709–715.
-
(2012)
Plant Biotechnol. J.
, vol.10
, pp. 709-715
-
-
Tollenaere, R.1
Hayward, A.2
Dalton-Morgan, J.3
Campbell, E.4
Lee, J.R.5
Lorenc, M.T.6
Manoli, S.7
-
47
-
-
66149142707
-
A newly-developed community microarray resource for transcriptome profiling in Brassica species enables the confirmation of Brassica-specific expressed sequenc
-
Trick, M., Cheung, F., Drou, N., Fraser, F., Lobenhofer, E.K., Hurban, P., Magusin, A. et al. (2009) A newly-developed community microarray resource for transcriptome profiling in Brassica species enables the confirmation of Brassica-specific expressed sequences. BMC Plant Biol. 9, 50.
-
(2009)
BMC Plant Biol.
, vol.9
, pp. 50
-
-
Trick, M.1
Cheung, F.2
Drou, N.3
Fraser, F.4
Lobenhofer, E.K.5
Hurban, P.6
Magusin, A.7
-
48
-
-
15544383703
-
Detection of chromosomal rearrangements derived from homologous recombination in four mapping populations of Brassica napu
-
Udall, J.A., Quijada, P.A. and Osborn, T.C. (2005) Detection of chromosomal rearrangements derived from homologous recombination in four mapping populations of Brassica napus L. Genetics, 169, 967–979.
-
(2005)
Genetics
, vol.169
, pp. 967-979
-
-
Udall, J.A.1
Quijada, P.A.2
Osborn, T.C.3
-
49
-
-
80053386792
-
The genome of the mesopolyploid crop species Brassica ra
-
Wang, X., Wang, H., Wang, J., Sun, R., Wu, J., Liu, S., Bai, Y. et al. (2011) The genome of the mesopolyploid crop species Brassica rapa. Nat. Genet. 43, 1035–1039.
-
(2011)
Nat. Genet.
, vol.43
, pp. 1035-1039
-
-
Wang, X.1
Wang, H.2
Wang, J.3
Sun, R.4
Wu, J.5
Liu, S.6
Bai, Y.7
-
50
-
-
84860137835
-
MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collineari
-
Wang, Y., Tang, H., Debarry, J.D., Tan, X., Li, J., Wang, X., Lee, T. et al. (2012) MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity. Nucleic Acids Res. 40, e49.
-
(2012)
Nucleic Acids Res.
, vol.40
-
-
Wang, Y.1
Tang, H.2
Debarry, J.D.3
Tan, X.4
Li, J.5
Wang, X.6
Lee, T.7
-
51
-
-
79959839889
-
Frequent gene movement and pseudogene evolution is common to the large and complex genomes of wheat, barley, and their relativ
-
Wicker, T., Mayer, K.F.X., Gundlach, H., Martis, M., Steuernagel, B., Scholz, U., Simková, H. et al. (2011) Frequent gene movement and pseudogene evolution is common to the large and complex genomes of wheat, barley, and their relatives. Plant Cell 23, 1706-1718.
-
(2011)
Plant Cell
, vol.23
, pp. 1706-1718
-
-
Wicker, T.1
Mayer, K.F.X.2
Gundlach, H.3
Martis, M.4
Steuernagel, B.5
Scholz, U.6
Simková, H.7
-
52
-
-
55449100528
-
Efficient and accurate construction of genetic linkage maps from the minimum spanning tree of a graph. ed. L. Krugly
-
Wu, Y., Bhat, P.R., Close, T.J. and Lonardi, S. (2008) Efficient and accurate construction of genetic linkage maps from the minimum spanning tree of a graph. ed. L. Kruglyak. PLoS Genet. 4, e1000212.
-
(2008)
PLoS Genet.
, vol.4
-
-
Wu, Y.1
Bhat, P.R.2
Close, T.J.3
Lonardi, S.4
-
53
-
-
84895896267
-
Loss/retention and evolution of NBS-encoding genes upon whole genome triplication of Brassica ra
-
Wu, P., Shao, Z.-Q., Wu, X.-Z., Wang, Q., Wang, B., Chen, J.-Q., Hang, Y.-Y. et al. (2014) Loss/retention and evolution of NBS-encoding genes upon whole genome triplication of Brassica rapa. Gene, 540, 54–61.
-
(2014)
Gene
, vol.540
, pp. 54-61
-
-
Wu, P.1
Shao, Z.-Q.2
Wu, X.-Z.3
Wang, Q.4
Wang, B.5
Chen, J.-Q.6
Hang, Y.-Y.7
-
54
-
-
84987597664
-
The genome sequence of allopolyploid Brassica juncea and analysis of differential homeolog gene expression influencing selecti
-
Yang, J., Liu, D., Wang, X., Ji, C., Cheng, F., Liu, B., Hu, Z. et al. (2016) The genome sequence of allopolyploid Brassica juncea and analysis of differential homeolog gene expression influencing selection. Nat. Genet. 1546–1718.
-
(2016)
Nat. Genet.
, pp. 1546-1718
-
-
Yang, J.1
Liu, D.2
Wang, X.3
Ji, C.4
Cheng, F.5
Liu, B.6
Hu, Z.7
-
55
-
-
84942371526
-
Exploring the rice dispensable genome using a metagenome-like assembly strate
-
Yao, W., Li, G., Zhao, H., Wang, G., Lian, X. and Xie, W. (2015) Exploring the rice dispensable genome using a metagenome-like assembly strategy. Genome Biol. 16, 187.
-
(2015)
Genome Biol.
, vol.16
, pp. 187
-
-
Yao, W.1
Li, G.2
Zhao, H.3
Wang, G.4
Lian, X.5
Xie, W.6
-
56
-
-
0034800374
-
InterProScan - an integration platform for the signature-recognition methods in InterP
-
Zdobnov, E.M. and Apweiler, R. (2001) InterProScan - an integration platform for the signature-recognition methods in InterPro. Bioinformatics, 17, 847–848.
-
(2001)
Bioinformatics
, vol.17
, pp. 847-848
-
-
Zdobnov, E.M.1
Apweiler, R.2
-
57
-
-
43149115851
-
Velvet: algorithms for de novo short read assembly using de Bruijn grap
-
Zerbino, D.R. and Birney, E. (2008) Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res. 18, 821–829.
-
(2008)
Genome Res.
, vol.18
, pp. 821-829
-
-
Zerbino, D.R.1
Birney, E.2
-
58
-
-
84978686167
-
Breeding signature of combining ability improvement revealed by a genomic variation map from recurrent selection population in Brassica nap
-
Zhao, X., Li, B., Zhang, K., Hu, K., Yi, B., Wen, J., Chaozhi, M. et al. (2016) Breeding signature of combining ability improvement revealed by a genomic variation map from recurrent selection population in Brassica napus. Sci. Rep. 6, 29553.
-
(2016)
Sci. Rep.
, vol.6
, pp. 29553
-
-
Zhao, X.1
Li, B.2
Zhang, K.3
Hu, K.4
Yi, B.5
Wen, J.6
Chaozhi, M.7
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