-
1
-
-
23944506014
-
Global epidemiology of hepatitis C virus infection
-
Shepard, C.W., Finelli, L., Alter, M.J., Global epidemiology of hepatitis C virus infection. Lancet Infect Dis 5 (2005), 558–567.
-
(2005)
Lancet Infect Dis
, vol.5
, pp. 558-567
-
-
Shepard, C.W.1
Finelli, L.2
Alter, M.J.3
-
2
-
-
0035811625
-
Hepatitis C virus infection
-
Lauer, G.M., Walker, B.D., Hepatitis C virus infection. N Engl J Med 345 (2001), 41–52.
-
(2001)
N Engl J Med
, vol.345
, pp. 41-52
-
-
Lauer, G.M.1
Walker, B.D.2
-
3
-
-
84894707183
-
Expanded classification of hepatitis C virus into 7 genotypes and 67 subtypes: updated criteria and genotype assignment web resource
-
Smith, D.B., Bukh, J., Kuiken, C., Muerhoff, A.S., Rice, C.M., Stapleton, J.T., et al. Expanded classification of hepatitis C virus into 7 genotypes and 67 subtypes: updated criteria and genotype assignment web resource. Hepatology 59 (2014), 318–327.
-
(2014)
Hepatology
, vol.59
, pp. 318-327
-
-
Smith, D.B.1
Bukh, J.2
Kuiken, C.3
Muerhoff, A.S.4
Rice, C.M.5
Stapleton, J.T.6
-
4
-
-
34848881072
-
Sequence diversity of hepatitis C virus: implications for immune control and therapy
-
Timm, J., Roggendorf, M., Sequence diversity of hepatitis C virus: implications for immune control and therapy. World J Gastroenterol 13 (2007), 4808–4817.
-
(2007)
World J Gastroenterol
, vol.13
, pp. 4808-4817
-
-
Timm, J.1
Roggendorf, M.2
-
5
-
-
84952815567
-
Direct-acting antivirals for the treatment of hepatitis C virus infection: optimizing current IFN-free treatment and future perspectives
-
Asselah, T., Boyer, N., Saadoun, D., Martinot-Peignoux, M., Marcellin, P., Direct-acting antivirals for the treatment of hepatitis C virus infection: optimizing current IFN-free treatment and future perspectives. Liver Int 36 (2016), 47–57.
-
(2016)
Liver Int
, vol.36
, pp. 47-57
-
-
Asselah, T.1
Boyer, N.2
Saadoun, D.3
Martinot-Peignoux, M.4
Marcellin, P.5
-
6
-
-
84892619580
-
Daclatasvir plus sofosbuvir for previously treated or untreated chronic HCV infection
-
Sulkowski, M.S., Gardiner, D.F., Rodriguez-Torres, M., Reddy, K.R., Hassanein, T., Jacobson, I., et al. Daclatasvir plus sofosbuvir for previously treated or untreated chronic HCV infection. N Engl J Med 370 (2014), 211–221.
-
(2014)
N Engl J Med
, vol.370
, pp. 211-221
-
-
Sulkowski, M.S.1
Gardiner, D.F.2
Rodriguez-Torres, M.3
Reddy, K.R.4
Hassanein, T.5
Jacobson, I.6
-
7
-
-
84877730954
-
Sofosbuvir for previously untreated chronic hepatitis C infection
-
Lawitz, E., Mangia, A., Wyles, D., Rodriguez-Torres, M., Hassanein, T., Gordon, S.C., et al. Sofosbuvir for previously untreated chronic hepatitis C infection. N Engl J Med 368 (2013), 1878–1887.
-
(2013)
N Engl J Med
, vol.368
, pp. 1878-1887
-
-
Lawitz, E.1
Mangia, A.2
Wyles, D.3
Rodriguez-Torres, M.4
Hassanein, T.5
Gordon, S.C.6
-
8
-
-
84952883325
-
Sofosbuvir and velpatasvir for HCV genotype 1, 2, 4, 5, and 6 infection
-
Feld, J.J., Jacobson, I.M., Hezode, C., Asselah, T., Ruane, P.J., Gruener, N., et al. Sofosbuvir and velpatasvir for HCV genotype 1, 2, 4, 5, and 6 infection. N Engl J Med 373 (2015), 2599–2607.
-
(2015)
N Engl J Med
, vol.373
, pp. 2599-2607
-
-
Feld, J.J.1
Jacobson, I.M.2
Hezode, C.3
Asselah, T.4
Ruane, P.J.5
Gruener, N.6
-
9
-
-
84952909361
-
Sofosbuvir and velpatasvir for HCV genotype 2 and 3 infection
-
Foster, G.R., Afdhal, N., Roberts, S.K., Brau, N., Gane, E.J., Pianko, S., et al. Sofosbuvir and velpatasvir for HCV genotype 2 and 3 infection. N Engl J Med 373 (2015), 2608–2617.
-
(2015)
N Engl J Med
, vol.373
, pp. 2608-2617
-
-
Foster, G.R.1
Afdhal, N.2
Roberts, S.K.3
Brau, N.4
Gane, E.J.5
Pianko, S.6
-
10
-
-
84914150658
-
Global epidemiology and genotype distribution of the hepatitis C virus infection
-
Gower, E., Estes, C., Blach, S., Razavi-Shearer, K., Razavi, H., Global epidemiology and genotype distribution of the hepatitis C virus infection. J Hepatol 61 (2014), S45–S57.
-
(2014)
J Hepatol
, vol.61
, pp. S45-S57
-
-
Gower, E.1
Estes, C.2
Blach, S.3
Razavi-Shearer, K.4
Razavi, H.5
-
11
-
-
84921060015
-
Global distribution and prevalence of hepatitis C virus genotypes
-
Messina, J.P., Humphreys, I., Flaxman, A., Brown, A., Cooke, G.S., Pybus, O.G., et al. Global distribution and prevalence of hepatitis C virus genotypes. Hepatology 61 (2015), 77–87.
-
(2015)
Hepatology
, vol.61
, pp. 77-87
-
-
Messina, J.P.1
Humphreys, I.2
Flaxman, A.3
Brown, A.4
Cooke, G.S.5
Pybus, O.G.6
-
12
-
-
78650862933
-
Hepatitis C virus genotype 3a with phylogenetically distinct origin is circulating in Pakistan
-
Rehman, I.U., Idrees, M., Ali, M., Ali, L., Butt, S., Hussain, A., et al. Hepatitis C virus genotype 3a with phylogenetically distinct origin is circulating in Pakistan. Genet Vaccines Ther, 9, 2011, 2.
-
(2011)
Genet Vaccines Ther
, vol.9
, pp. 2
-
-
Rehman, I.U.1
Idrees, M.2
Ali, M.3
Ali, L.4
Butt, S.5
Hussain, A.6
-
13
-
-
84945929387
-
Spatiotemporal reconstruction of the introduction of hepatitis C virus into Scotland and its subsequent regional transmission
-
McNaughton, A.L., Cameron, I.D., Wignall-Fleming, E.B., Biek, R., McLauchlan, J., Gunson, R.N., et al. Spatiotemporal reconstruction of the introduction of hepatitis C virus into Scotland and its subsequent regional transmission. J Virol 89 (2015), 11223–11232.
-
(2015)
J Virol
, vol.89
, pp. 11223-11232
-
-
McNaughton, A.L.1
Cameron, I.D.2
Wignall-Fleming, E.B.3
Biek, R.4
McLauchlan, J.5
Gunson, R.N.6
-
14
-
-
84883741503
-
Molecular epidemiology and genetic history of hepatitis C virus subtype 3a infection in Thailand
-
Akkarathamrongsin, S., Hacharoen, P., Tangkijvanich, P., Theamboonlers, A., Tanaka, Y., Mizokami, M., et al. Molecular epidemiology and genetic history of hepatitis C virus subtype 3a infection in Thailand. Intervirology 56 (2013), 284–294.
-
(2013)
Intervirology
, vol.56
, pp. 284-294
-
-
Akkarathamrongsin, S.1
Hacharoen, P.2
Tangkijvanich, P.3
Theamboonlers, A.4
Tanaka, Y.5
Mizokami, M.6
-
15
-
-
84941878614
-
High incidence of the hepatitis C virus recombinant 2k/1b in Georgia: Recommendations for testing and treatment
-
Karchava, M., Waldenstrom, J., Parker, M., Hallack, R., Sharvadze, L., Gatserelia, L., et al. High incidence of the hepatitis C virus recombinant 2k/1b in Georgia: Recommendations for testing and treatment. Hepatol Res 45 (2015), 1292–1298.
-
(2015)
Hepatol Res
, vol.45
, pp. 1292-1298
-
-
Karchava, M.1
Waldenstrom, J.2
Parker, M.3
Hallack, R.4
Sharvadze, L.5
Gatserelia, L.6
-
16
-
-
84863421649
-
Origin and evolution of the unique hepatitis C virus circulating recombinant form 2k/1b
-
Raghwani, J., Thomas, X.V., Koekkoek, S.M., Schinkel, J., Molenkamp, R., van de Laar, T.J., et al. Origin and evolution of the unique hepatitis C virus circulating recombinant form 2k/1b. J Virol 86 (2012), 2212–2220.
-
(2012)
J Virol
, vol.86
, pp. 2212-2220
-
-
Raghwani, J.1
Thomas, X.V.2
Koekkoek, S.M.3
Schinkel, J.4
Molenkamp, R.5
van de Laar, T.J.6
-
17
-
-
0036196640
-
A natural intergenotypic recombinant of hepatitis C virus identified in St Petersburg
-
Kalinina, O., Norder, H., Mukomolov, S., Magnius, L.O., A natural intergenotypic recombinant of hepatitis C virus identified in St Petersburg. J Virol 76 (2002), 4034–4043.
-
(2002)
J Virol
, vol.76
, pp. 4034-4043
-
-
Kalinina, O.1
Norder, H.2
Mukomolov, S.3
Magnius, L.O.4
-
18
-
-
84873604286
-
Antiviral resistance and the future landscape of hepatitis C virus infection therapy
-
Wyles, D.L., Antiviral resistance and the future landscape of hepatitis C virus infection therapy. J Infect Dis 207 (2013), S33–S39.
-
(2013)
J Infect Dis
, vol.207
, pp. S33-S39
-
-
Wyles, D.L.1
-
19
-
-
84890289271
-
Naturally occurring resistance mutations to inhibitors of HCV NS5A region and NS5B polymerase in DAA treatment-naive patients
-
Paolucci, S., Fiorina, L., Mariani, B., Gulminetti, R., Novati, S., Barbarini, G., et al. Naturally occurring resistance mutations to inhibitors of HCV NS5A region and NS5B polymerase in DAA treatment-naive patients. Virol J, 10, 2013, 355.
-
(2013)
Virol J
, vol.10
, pp. 355
-
-
Paolucci, S.1
Fiorina, L.2
Mariani, B.3
Gulminetti, R.4
Novati, S.5
Barbarini, G.6
-
20
-
-
84922318694
-
Prevalence of the hepatitis C virus NS3 polymorphism Q80K in genotype 1 patients in the European region
-
Sarrazin, C., Lathouwers, E., Peeters, M., Daems, B., Buelens, A., Witek, J., et al. Prevalence of the hepatitis C virus NS3 polymorphism Q80K in genotype 1 patients in the European region. Antiviral Res 116 (2015), 10–16.
-
(2015)
Antiviral Res
, vol.116
, pp. 10-16
-
-
Sarrazin, C.1
Lathouwers, E.2
Peeters, M.3
Daems, B.4
Buelens, A.5
Witek, J.6
-
21
-
-
0027178527
-
Typing of hepatitis C virus isolates and characterization of new subtypes using a line probe assay
-
Stuyver, L., Rossau, R., Wyseur, A., Duhamel, M., Vanderborght, B., Van Heuverswyn, H., et al. Typing of hepatitis C virus isolates and characterization of new subtypes using a line probe assay. J Gen Virol 74 (1993), 1093–1102.
-
(1993)
J Gen Virol
, vol.74
, pp. 1093-1102
-
-
Stuyver, L.1
Rossau, R.2
Wyseur, A.3
Duhamel, M.4
Vanderborght, B.5
Van Heuverswyn, H.6
-
22
-
-
0028807064
-
Hepatitis C virus genotyping by means of 5’-UR/core line probe assays and molecular analysis of untypeable samples
-
Stuyver, L., Wyseur, A., van Arnhem, W., Lunel, F., Laurent-Puig, P., Pawlotsky, J.M., et al. Hepatitis C virus genotyping by means of 5’-UR/core line probe assays and molecular analysis of untypeable samples. Virus Res 38 (1995), 137–157.
-
(1995)
Virus Res
, vol.38
, pp. 137-157
-
-
Stuyver, L.1
Wyseur, A.2
van Arnhem, W.3
Lunel, F.4
Laurent-Puig, P.5
Pawlotsky, J.M.6
-
23
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
-
Altschul, S.F., Madden, T.L., Schaffer, A.A., Zhang, J., Zhang, Z., Miller, W., et al. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25 (1997), 3389–3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
-
24
-
-
84932649981
-
Genotype- and subtype-independent full-genome sequencing assay for hepatitis C virus
-
Hedskog, C., Chodavarapu, K., Ku, K.S., Xu, S., Martin, R., Miller, M.D., et al. Genotype- and subtype-independent full-genome sequencing assay for hepatitis C virus. J Clin Microbiol 53 (2015), 2049–2059.
-
(2015)
J Clin Microbiol
, vol.53
, pp. 2049-2059
-
-
Hedskog, C.1
Chodavarapu, K.2
Ku, K.S.3
Xu, S.4
Martin, R.5
Miller, M.D.6
-
25
-
-
0027968068
-
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson, J.D., Higgins, D.G., Gibson, T.J., CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22 (1994), 4673–4680.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
26
-
-
33750387249
-
Genetic algorithm approaches for the phylogenetic analysis of large biological sequence datasets under the maximum likelihood criterion
-
Ph.D. dissertation The University of Texas at Austin
-
Zwickl, D.J., Genetic algorithm approaches for the phylogenetic analysis of large biological sequence datasets under the maximum likelihood criterion. Ph.D. dissertation, 2006, The University of Texas at Austin.
-
(2006)
-
-
Zwickl, D.J.1
-
27
-
-
33745256005
-
Approximate likelihood-ratio test for branches: A fast, accurate, and powerful alternative
-
Anisimova, M., Gascuel, O., Approximate likelihood-ratio test for branches: A fast, accurate, and powerful alternative. Syst Biol 55 (2006), 539–552.
-
(2006)
Syst Biol
, vol.55
, pp. 539-552
-
-
Anisimova, M.1
Gascuel, O.2
-
28
-
-
77950806408
-
New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0
-
Guindon, S., Dufayard, J.F., Lefort, V., Anisimova, M., Hordijk, W., Gascuel, O., New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Syst Biol 59 (2010), 307–321.
-
(2010)
Syst Biol
, vol.59
, pp. 307-321
-
-
Guindon, S.1
Dufayard, J.F.2
Lefort, V.3
Anisimova, M.4
Hordijk, W.5
Gascuel, O.6
-
29
-
-
84921503517
-
Characterization of hepatitis C virus intergenotypic recombinant strains and associated virological response to sofosbuvir/ribavirin
-
Hedskog, C., Doehle, B., Chodavarapu, K., Gontcharova, V., Crespo Garcia, J., De Knegt, R., et al. Characterization of hepatitis C virus intergenotypic recombinant strains and associated virological response to sofosbuvir/ribavirin. Hepatology 61 (2015), 471–480.
-
(2015)
Hepatology
, vol.61
, pp. 471-480
-
-
Hedskog, C.1
Doehle, B.2
Chodavarapu, K.3
Gontcharova, V.4
Crespo Garcia, J.5
De Knegt, R.6
-
30
-
-
84987899470
-
Treatment of a patient with genotype 7 HCV infection with sofosbuvir and velpatasvir
-
Schreiber, J., McNally, J., Chodavarapu, K., Svarovskaia, E., Moreno, C., Treatment of a patient with genotype 7 HCV infection with sofosbuvir and velpatasvir. Hepatology 64:3 (2016), 983–985.
-
(2016)
Hepatology
, vol.64
, Issue.3
, pp. 983-985
-
-
Schreiber, J.1
McNally, J.2
Chodavarapu, K.3
Svarovskaia, E.4
Moreno, C.5
-
31
-
-
0034635771
-
The role of parenteral antischistosomal therapy in the spread of hepatitis C virus in Egypt
-
Frank, C., Mohamed, M.K., Strickland, G.T., Lavanchy, D., Arthur, R.R., Magder, L.S., et al. The role of parenteral antischistosomal therapy in the spread of hepatitis C virus in Egypt. Lancet 355 (2000), 887–891.
-
(2000)
Lancet
, vol.355
, pp. 887-891
-
-
Frank, C.1
Mohamed, M.K.2
Strickland, G.T.3
Lavanchy, D.4
Arthur, R.R.5
Magder, L.S.6
-
32
-
-
84897441196
-
Recent FDA approval of sofosbuvir and simeprevir. Implications for current HCV treatment
-
Lin, M.V., Chung, R., Recent FDA approval of sofosbuvir and simeprevir. Implications for current HCV treatment. Clin Liver Dis 3 (2014), 65–68.
-
(2014)
Clin Liver Dis
, vol.3
, pp. 65-68
-
-
Lin, M.V.1
Chung, R.2
-
33
-
-
84901595218
-
Daclatasvir plus asunaprevir for chronic HCV genotype 1b infection
-
Kumada, H., Suzuki, Y., Ikeda, K., Toyota, J., Karino, Y., Chayama, K., et al. Daclatasvir plus asunaprevir for chronic HCV genotype 1b infection. Hepatology 59 (2014), 2083–2091.
-
(2014)
Hepatology
, vol.59
, pp. 2083-2091
-
-
Kumada, H.1
Suzuki, Y.2
Ikeda, K.3
Toyota, J.4
Karino, Y.5
Chayama, K.6
-
34
-
-
84896460675
-
Hepatitis C virus NS5A inhibitors and drug resistance mutations
-
Nakamoto, S., Kanda, T., Wu, S., Shirasawa, H., Yokosuka, O., Hepatitis C virus NS5A inhibitors and drug resistance mutations. World J Gastroenterol 20 (2014), 2902–2912.
-
(2014)
World J Gastroenterol
, vol.20
, pp. 2902-2912
-
-
Nakamoto, S.1
Kanda, T.2
Wu, S.3
Shirasawa, H.4
Yokosuka, O.5
-
35
-
-
84861109960
-
Genotype and subtype profiling of PSI-7977 as a nucleotide inhibitor of hepatitis C virus
-
Lam, A.M., Espiritu, C., Bansal, S., Micolochick Steuer, H.M., Niu, C., Zennou, V., et al. Genotype and subtype profiling of PSI-7977 as a nucleotide inhibitor of hepatitis C virus. Antimicrob Agents Chemother 56 (2012), 3359–3368.
-
(2012)
Antimicrob Agents Chemother
, vol.56
, pp. 3359-3368
-
-
Lam, A.M.1
Espiritu, C.2
Bansal, S.3
Micolochick Steuer, H.M.4
Niu, C.5
Zennou, V.6
-
36
-
-
34247254413
-
Improvement of hepatitis C virus (HCV) genotype determination with the new version of the INNO-LiPA HCV assay
-
Bouchardeau, F., Cantaloube, J.F., Chevaliez, S., Portal, C., Razer, A., Lefrere, J.J., et al. Improvement of hepatitis C virus (HCV) genotype determination with the new version of the INNO-LiPA HCV assay. J Clin Microbiol 45 (2007), 1140–1145.
-
(2007)
J Clin Microbiol
, vol.45
, pp. 1140-1145
-
-
Bouchardeau, F.1
Cantaloube, J.F.2
Chevaliez, S.3
Portal, C.4
Razer, A.5
Lefrere, J.J.6
-
37
-
-
84946413443
-
Diagnosis of hepatitis C virus genotype 2k/1b needs NS5B sequencing
-
De Keukeleire, S., Descheemaeker, P., Reynders, M., Diagnosis of hepatitis C virus genotype 2k/1b needs NS5B sequencing. Int J Infect Dis 41 (2015), 1–2.
-
(2015)
Int J Infect Dis
, vol.41
, pp. 1-2
-
-
De Keukeleire, S.1
Descheemaeker, P.2
Reynders, M.3
-
38
-
-
33750944590
-
Genotyping hepatitis C viruses from Southeast Asia by a novel line probe assay that simultaneously detects core and 5’ untranslated regions
-
Noppornpanth, S., Sablon, E., De Nys, K., Truong, X.L., Brouwer, J., Van Brussel, M., et al. Genotyping hepatitis C viruses from Southeast Asia by a novel line probe assay that simultaneously detects core and 5’ untranslated regions. J Clin Microbiol 44 (2006), 3969–3974.
-
(2006)
J Clin Microbiol
, vol.44
, pp. 3969-3974
-
-
Noppornpanth, S.1
Sablon, E.2
De Nys, K.3
Truong, X.L.4
Brouwer, J.5
Van Brussel, M.6
-
39
-
-
84965171281
-
L159F and V321A sofosbuvir-associated hepatitis C virus NS5B substitutions
-
Svarovskaia, E.S., Gane, E., Dvory-Sobol, H., Martin, R., Doehle, B., Hedskog, C., et al. L159F and V321A sofosbuvir-associated hepatitis C virus NS5B substitutions. J Infect Dis 213 (2016), 1240–1247.
-
(2016)
J Infect Dis
, vol.213
, pp. 1240-1247
-
-
Svarovskaia, E.S.1
Gane, E.2
Dvory-Sobol, H.3
Martin, R.4
Doehle, B.5
Hedskog, C.6
-
40
-
-
84979740720
-
Ledipasvir plus sofosbuvir for 12 weeks in patients with hepatitis C genotype 4 infection
-
Abergel, A., Metivier, S., Samuel, D., Jiang, D., Kersey, K., Pang, P.S., et al. Ledipasvir plus sofosbuvir for 12 weeks in patients with hepatitis C genotype 4 infection. Hepatology 64:4 (2016), 1049–1056.
-
(2016)
Hepatology
, vol.64
, Issue.4
, pp. 1049-1056
-
-
Abergel, A.1
Metivier, S.2
Samuel, D.3
Jiang, D.4
Kersey, K.5
Pang, P.S.6
-
41
-
-
85014057062
-
NS5A resistance-associated substitutions in patients with genotype 1 hepatitis C virus: prevalence and effect on treatment outcome
-
Zeuzem, S., Mizokami, M., Pianko, S., Mangia, A., Han, K.H., Martin, R., et al. NS5A resistance-associated substitutions in patients with genotype 1 hepatitis C virus: prevalence and effect on treatment outcome. J Hepatol 66 (2017), 910–918.
-
(2017)
J Hepatol
, vol.66
, pp. 910-918
-
-
Zeuzem, S.1
Mizokami, M.2
Pianko, S.3
Mangia, A.4
Han, K.H.5
Martin, R.6
|