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Volumn 66, Issue 3, 2017, Pages 299-319

A relaxed directional random walk model for phylogenetic trait evolution

Author keywords

Brownian motion; Diffusion processes; Phylodynamics; Phylogenetics; Phylogeography; Trait evolution

Indexed keywords

AFRICA; BAYES THEOREM; BIOLOGICAL MODEL; CLASSIFICATION; HUMAN; HUMAN IMMUNODEFICIENCY VIRUS 1; HUMAN IMMUNODEFICIENCY VIRUS INFECTION; IMMUNOLOGY; PHENOTYPE; PHYLOGENY; PROCEDURES; VIROLOGY;

EID: 85019742431     PISSN: 10635157     EISSN: 1076836X     Source Type: Journal    
DOI: 10.1093/sysbio/syw093     Document Type: Article
Times cited : (30)

References (90)
  • 1
    • 48249133971 scopus 로고    scopus 로고
    • Phylogenetic escalation and decline of plant defense strategies
    • Agrawal A., Fishbein M. 2008. Phylogenetic escalation and decline of plant defense strategies. Proc. Natl. Acad. Sci. 105:10057-10060.
    • (2008) Proc. Natl. Acad. Sci. , vol.105 , pp. 10057-10060
    • Agrawal, A.1    Fishbein, M.2
  • 4
    • 84966589392 scopus 로고    scopus 로고
    • Genealogical working distributions for Bayesian model testing with phylogenetic uncertainty
    • Baele G., Lemey P., Suchard M. A. 2016a. Genealogical working distributions for bayesian model testing with phylogenetic uncertainty. Sys. Biol. 65:250-264.
    • (2016) Sys. Biol. , vol.65 , pp. 250-264
    • Baele, G.1    Lemey, P.2    Suchard, M.A.3
  • 5
    • 85014321868 scopus 로고    scopus 로고
    • Emerging concepts of dataintegration in pathogen phylodynamics
    • in press
    • Baele G., Suchard M. A., Rambaut A., Lemey, P. 2016b. Emerging concepts of dataintegration in pathogen phylodynamics. Systematic Biology, in press.
    • (2016) Systematic Biology
    • Baele, G.1    Suchard, M.A.2    Rambaut, A.3    Lemey, P.4
  • 6
    • 53349160053 scopus 로고    scopus 로고
    • Challenges in the development of an HIV-1 vaccine
    • Barouch D. 2008. Challenges in the development of an HIV-1 vaccine. Nature 455:613-619.
    • (2008) Nature , vol.455 , pp. 613-619
    • Barouch, D.1
  • 7
  • 8
    • 84864320749 scopus 로고    scopus 로고
    • Modeling stabilizing selection: Expanding the Ornstein-Uhlenbeck model of adaptive evolution
    • Beaulieu J., Jhwueng D., Boettiger C., O'Meara, B. 2012. Modeling stabilizing selection: Expanding the Ornstein-Uhlenbeck model of adaptive evolution. Evolution 66:2369-2383.
    • (2012) Evolution , vol.66 , pp. 2369-2383
    • Beaulieu, J.1    Jhwueng, D.2    Boettiger, C.3    O'Meara, B.4
  • 11
    • 34249932299 scopus 로고    scopus 로고
    • A highresolution genetic signature of demographic and spatial expansion in epizootic rabies virus
    • Biek R., Henderson J., Waller L., Rupprecht C., Real L. 2007. A highresolution genetic signature of demographic and spatial expansion in epizootic rabies virus. PNAS 104:7993-7998.
    • (2007) PNAS , vol.104 , pp. 7993-7998
    • Biek, R.1    Henderson, J.2    Waller, L.3    Rupprecht, C.4    Real, L.5
  • 14
    • 77957923165 scopus 로고    scopus 로고
    • Three roads diverged? Routes to phylogeographic inference
    • Bloomquist E. W., Lemey P., Suchard M. A. 2010. Three roads diverged? routes to phylogeographic inference. Trends Ecol. & Evol. 25:626-632.
    • (2010) Trends Ecol. & Evol. , vol.25 , pp. 626-632
    • Bloomquist, E.W.1    Lemey, P.2    Suchard, M.A.3
  • 15
    • 84979222171 scopus 로고    scopus 로고
    • Inferring bounded evolutioninphenotypic characters from phylogenetic comparative data
    • Boucher F. Démery V. 2016. Inferring bounded evolutioninphenotypic characters from phylogenetic comparative data. Syst. Biol. 65:651-661.
    • (2016) Syst. Biol. , vol.65 , pp. 651-661
    • Boucher, F.1    Démery, V.2
  • 16
  • 17
    • 0000643179 scopus 로고
    • A brief account of microscopial observations made in the months of June, July and August, 1827, on the particles contained in the pollen of plants; and on the general existence of active molecules in organic and inorganic bodies
    • Brown R. 1828. A brief account of microscopial observations made in the months of June, July and August, 1827, on the particles contained in the pollen of plants; and on the general existence of active molecules in organic and inorganic bodies. Philos. Mag. 4:161-173.
    • (1828) Philos. Mag. , vol.4 , pp. 161-173
    • Brown, R.1
  • 19
    • 0036719574 scopus 로고    scopus 로고
    • Antibodies, viruses and vaccines
    • Burton D. 2002. Antibodies, viruses and vaccines. Nat. Rev. Immunol. 2:706-713.
    • (2002) Nat. Rev. Immunol. , vol.2 , pp. 706-713
    • Burton, D.1
  • 20
    • 1542317452 scopus 로고    scopus 로고
    • HIV vaccine design and the neutralizing antibody problem
    • Burton D. 2004. HIV vaccine design and the neutralizing antibody problem. Nat. Immunol. 5:233-236.
    • (2004) Nat. Immunol. , vol.5 , pp. 233-236
    • Burton, D.1
  • 21
    • 11944264347 scopus 로고    scopus 로고
    • Phylogenetic comparative analysis: A modeling approach for adaptive evolution
    • Butler M. King A. 2004. Phylogenetic comparative analysis: a modeling approach for adaptive evolution. Am. Nat. 164.
    • (2004) Am. Nat. , pp. 164
    • King, B.M.A.1
  • 23
    • 33344465800 scopus 로고    scopus 로고
    • Relaxed phylogenetics and dating with confidence
    • Drummond A., Ho S., Phillips M., Rambaut A. 2006. Relaxed phylogenetics and dating with confidence. PLoS Biol. 4:e88.
    • (2006) PLoS Biol. , vol.4 , pp. e88
    • Drummond, A.1    Ho, S.2    Phillips, M.3    Rambaut, A.4
  • 24
    • 77956488734 scopus 로고    scopus 로고
    • Bayesian random local clocks, or one rate to rule them all
    • Drummond A. Suchard M. 2010. Bayesian random local clocks, or one rate to rule them all. BMC Biol. 8:114.
    • (2010) BMC Biol. , vol.8 , pp. 114
    • Drummond, A.1    Suchard, M.2
  • 26
    • 82855161365 scopus 로고    scopus 로고
    • A novel comparative method for identifying shifts in the rate of character evolution on trees
    • Eastman J., Alfaro M., Joyce P., Hipp A., Harmon L. 2011. A novel comparative method for identifying shifts in the rate of character evolution on trees. Evolution 65:3578-89.
    • (2011) Evolution , vol.65 , pp. 3578-3589
    • Eastman, J.1    Alfaro, M.2    Joyce, P.3    Hipp, A.4    Harmon, L.5
  • 27
    • 79960385535 scopus 로고    scopus 로고
    • Activity of broadly neutralizing antibodies, including PG9, PG16, and VRC01, against recently transmitted subtype B HIV-1 variants from early and late in the epidemic
    • Euler Z., Bunnik E., Burger J., Boeser-Nunnink B., Grijsen M., Prins J., Schuitemaker H. 2011. Activity of broadly neutralizing antibodies, including PG9, PG16, and VRC01, against recently transmitted subtype B HIV-1 variants from early and late in the epidemic. J. Virol. 85:7236-7245.
    • (2011) J. Virol. , vol.85 , pp. 7236-7245
    • Euler, Z.1    Bunnik, E.2    Burger, J.3    Boeser-Nunnink, B.4    Grijsen, M.5    Prins, J.6    Schuitemaker, H.7
  • 29
    • 0015808083 scopus 로고
    • Maximum-likelihood estimation of evolutionary trees from continuous characters
    • Felsenstein J. 1973. Maximum-likelihood estimation of evolutionary trees from continuous characters. Am. J. Hum. Genet. 25:471-492.
    • (1973) Am. J. Hum. Genet. , vol.25 , pp. 471-492
    • Felsenstein, J.1
  • 30
    • 21444434778 scopus 로고
    • Evolutionary trees from DNA sequences: A maximum likelihood approach
    • Felsenstein J. 1981. Evolutionary trees from DNA sequences: a maximum likelihood approach. J. Mol. Evol. 13:93-104.
    • (1981) J. Mol. Evol. , vol.13 , pp. 93-104
    • Felsenstein, J.1
  • 31
    • 0022203256 scopus 로고
    • Phylogenies and the comparative method
    • Felsenstein J. 1985. Phylogenies and the comparative method. Am. Nat. 125:1-15.
    • (1985) Am. Nat. , vol.125 , pp. 1-15
    • Felsenstein, J.1
  • 32
    • 0024181337 scopus 로고
    • Phylogenies and quantitative characters
    • Felsenstein J. 1988. Phylogenies and quantitative characters. Ann. Rev. Ecol. Syst. 19:445-471.
    • (1988) Ann. Rev. Ecol. Syst. , vol.19 , pp. 445-471
    • Felsenstein, J.1
  • 33
    • 0036920097 scopus 로고    scopus 로고
    • Phylogenetic analysis and comparative data: A test and review of evidence
    • Freckleton R., Harvey P., Pagel M. 2002. Phylogenetic analysis and comparative data: A test and review of evidence. Am. Nat. 160:712-726.
    • (2002) Am. Nat. , vol.160 , pp. 712-726
    • Freckleton, R.1    Harvey, P.2    Pagel, M.3
  • 34
    • 84893179575 scopus 로고
    • Variable selection via Gibbs sampling
    • George E., McCulloch R. 1993. Variable selection via Gibbs sampling. JASA 88:881-889.
    • (1993) JASA , vol.88 , pp. 881-889
    • George, E.1    McCulloch, R.2
  • 35
    • 84994417645 scopus 로고    scopus 로고
    • Understanding past population dynamics: Bayesian coalescent-based modeling with covariates
    • Gill M., Lemey P., Bennett S., Biek R., Suchard M. 2016. Understanding past population dynamics: Bayesian coalescent-based modeling with covariates. Syst. Biol. 65:1041-1056.
    • (2016) Syst. Biol. , vol.65 , pp. 1041-1056
    • Gill, M.1    Lemey, P.2    Bennett, S.3    Biek, R.4    Suchard, M.5
  • 36
    • 84873576867 scopus 로고    scopus 로고
    • Improving Bayesian population dynamics inference: A coalescent-based model for multiple loci
    • Gill M., Lemey P., Faria N., Rambaut A., Shapiro B., Suchard M. 2013. Improving Bayesian population dynamics inference: a coalescent-based model for multiple loci. Mol. Biol. Evol. 30:713-724.
    • (2013) Mol. Biol. Evol. , vol.30 , pp. 713-724
    • Gill, M.1    Lemey, P.2    Faria, N.3    Rambaut, A.4    Shapiro, B.5    Suchard, M.6
  • 38
    • 0030772835 scopus 로고    scopus 로고
    • Stabilizing selection and the comparative analysis of adaptation
    • Hansen T. 1997. Stabilizing selection and the comparative analysis of adaptation. Evolution 52:1341-1351.
    • (1997) Evolution , vol.52 , pp. 1341-1351
    • Hansen, T.1
  • 39
    • 0029660868 scopus 로고    scopus 로고
    • Translating between microevolutionary process and macroevolutionary patterns: The correlation structure of interspecific data
    • Hansen T., Martins E. 1996. Translating between microevolutionary process and macroevolutionary patterns: the correlation structure of interspecific data. Evolution 50:1404-1417.
    • (1996) Evolution , vol.50 , pp. 1404-1417
    • Hansen, T.1    Martins, E.2
  • 40
    • 47749107969 scopus 로고    scopus 로고
    • A comparative method for studying adaptation to a randomly evolving environment
    • Hansen T., Pienaar J., Orzack S. 2008. A comparative method for studying adaptation to a randomly evolving environment. Evolution 62:1965-1967.
    • (2008) Evolution , vol.62 , pp. 1965-1967
    • Hansen, T.1    Pienaar, J.2    Orzack, S.3
  • 42
    • 0022376704 scopus 로고
    • Datingthehuman-apesplitting by a molecular clock of mitochondrial DNA
    • Hasegawa M., Kishino H., Yano T. 1985. Datingthehuman-apesplitting by a molecular clock of mitochondrial DNA. J. Mol. Evol. 22:160-174.
    • (1985) J. Mol. Evol. , vol.22 , pp. 160-174
    • Hasegawa, M.1    Kishino, H.2    Yano, T.3
  • 43
    • 77956890234 scopus 로고
    • Monte Carlo sampling methods using Markov chains and their applications
    • Hastings W. 1970. Monte Carlo sampling methods using Markov chains and their applications. Biometrika 57:97-109.
    • (1970) Biometrika , vol.57 , pp. 97-109
    • Hastings, W.1
  • 44
    • 0037965118 scopus 로고    scopus 로고
    • Detecting correlation between characters in a comparative analysis with uncertain phylogeny
    • Huelsenbeck J., Rannala B. 2003. Detecting correlation between characters in a comparative analysis with uncertain phylogeny. Evolution 57:1237-1247.
    • (2003) Evolution , vol.57 , pp. 1237-1247
    • Huelsenbeck, J.1    Rannala, B.2
  • 45
    • 33845319763 scopus 로고    scopus 로고
    • Fitting and comparing models of phyletic evolution: Random walks and beyond
    • Hunt G. 2006. Fitting and comparing models of phyletic evolution: Random walks and beyond. Paleobiology 32:578-601.
    • (2006) Paleobiology , vol.32 , pp. 578-601
    • Hunt, G.1
  • 46
    • 36749102083 scopus 로고    scopus 로고
    • The relative importance of directional change, random walks, and stasis in the evolution of fossil lineages
    • Hunt G. 2007. The relative importance of directional change, random walks, and stasis in the evolution of fossil lineages. Proc. Nat. Acad. Sci. USA 104:18404-18408.
    • (2007) Proc. Nat. Acad. Sci. USA , vol.104 , pp. 18404-18408
    • Hunt, G.1
  • 47
    • 33846432342 scopus 로고
    • Some tests of significance, treated by the theory of probability
    • Jeffreys H. 1935. Some tests of significance, treated by the theory of probability. Math. Proc. Cambridge Philos. Soc. 31:203-222.
    • (1935) Math. Proc. Cambridge Philos. Soc. , vol.31 , pp. 203-222
    • Jeffreys, H.1
  • 49
    • 34249068954 scopus 로고    scopus 로고
    • AnHIV vaccine: Evolving concepts
    • Johnston, M., Fauci A. 2007. AnHIV vaccine: evolving concepts. N. Eng. J. Med. 356:2073-2080.
    • (2007) N. Eng. J. Med. , vol.356 , pp. 2073-2080
    • Johnston, M.1    Fauci, A.2
  • 51
    • 84950934893 scopus 로고
    • Bayes factors
    • Kass R. Raftery A. 1995. Bayes factors. JASA 90:773-795.
    • (1995) JASA , vol.90 , pp. 773-795
    • Kass, R.1    Raftery, A.2
  • 52
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura M. 1980. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16:111-120.
    • (1980) J. Mol. Evol. , vol.16 , pp. 111-120
    • Kimura, M.1
  • 54
    • 0011373760 scopus 로고    scopus 로고
    • Variable selection for regression models
    • Kuo L., Mallick B. 1998. Variable selection for regression models. Sankhya B 60:65-81.
    • (1998) Sankhya B , vol.60 , pp. 65-81
    • Kuo, L.1    Mallick, B.2
  • 55
    • 78650493648 scopus 로고    scopus 로고
    • A phylogenetic model for investigating correlated evolution of subsitution rates and continuous phenotypic characters
    • Lartillot N., Poujol R. 2011. A phylogenetic model for investigating correlated evolution of subsitution rates and continuous phenotypic characters. Mol. Biol. Evol. 28:729-744.
    • (2011) Mol. Biol. Evol. , vol.28 , pp. 729-744
    • Lartillot, N.1    Poujol, R.2
  • 57
    • 77955011960 scopus 로고    scopus 로고
    • Phylogeography takes a relaxed random walk in continuous space and time
    • Lemey P., Rambaut A., Welch J., Suchard M. 2010. Phylogeography takes a relaxed random walk in continuous space and time. Mole. Biol. Evol. 27:1877-1885.
    • (2010) Mole. Biol. Evol. , vol.27 , pp. 1877-1885
    • Lemey, P.1    Rambaut, A.2    Welch, J.3    Suchard, M.4
  • 58
    • 84873403934 scopus 로고    scopus 로고
    • Reconstructing the initial global spread of a human influenza pandemic: A Bayesian spatialtemporal model for the global spread of H1N1pdm
    • Lemey P., Suchard M., Rambaut A. 2009b. Reconstructing the initial global spread of a human influenza pandemic: A Bayesian spatialtemporal model for the global spread of H1N1pdm. PLoS Curr. 1: RRN1031.
    • (2009) PLoS Curr. , vol.1 , pp. RRN1031
    • Lemey, P.1    Suchard, M.2    Rambaut, A.3
  • 59
    • 0033413220 scopus 로고    scopus 로고
    • Estimation ofancestral states of continuous characters: A computer simulation study
    • Martins E. 1999. Estimation ofancestral states of continuous characters: a computer simulation study. Syst. Biol. 48:642-650.
    • (1999) Syst. Biol. , vol.48 , pp. 642-650
    • Martins, E.1
  • 60
    • 77952311370 scopus 로고    scopus 로고
    • The role of antibodies in HIV vaccines
    • Mascola J., Montefiori D. 2010. The role of antibodies in HIV vaccines. Ann. Rev. Immun. 28:413-444.
    • (2010) Ann. Rev. Immun. , vol.28 , pp. 413-444
    • Mascola, J.1    Montefiori, D.2
  • 64
    • 0034061046 scopus 로고    scopus 로고
    • Independent contrasts succeed where ancestor reconstruction fails in a known bacteriophage phylogeny
    • Oakley T., Cunningham C. 2000. Independent contrasts succeed where ancestor reconstruction fails in a known bacteriophage phylogeny. Evolution 54:397-405.
    • (2000) Evolution , vol.54 , pp. 397-405
    • Oakley, T.1    Cunningham, C.2
  • 65
    • 33747056328 scopus 로고    scopus 로고
    • Testing for different rates of continuous trait evolution using likelihood
    • O'Meara B., Ane C., Sanderson M., Wainwright P. 2006. Testing for different rates of continuous trait evolution using likelihood. Evolution 60:922-933.
    • (2006) Evolution , vol.60 , pp. 922-933
    • O'Meara, B.1    Ane, C.2    Sanderson, M.3    Wainwright, P.4
  • 66
    • 0033422611 scopus 로고    scopus 로고
    • The maximum likelihood approach to reconstructing ancestral character states of discrete characters on phylogenies
    • Pagel M. 1999. The maximum likelihood approach to reconstructing ancestral character states of discrete characters on phylogenies. Syst. Biol. 48:612-622.
    • (1999) Syst. Biol. , vol.48 , pp. 612-622
    • Pagel, M.1
  • 67
    • 84907005886 scopus 로고    scopus 로고
    • Complex body size trends in the evolution of sloths (Xenarthra: Pilosa)
    • Pant S., Goswami A., Finarelli J. 2014. Complex body size trends in the evolution of sloths (Xenarthra: Pilosa). BMC Evol. Biol. 14:184.
    • (2014) BMC Evol. Biol. , vol.14 , pp. 184
    • Pant, S.1    Goswami, A.2    Finarelli, J.3
  • 69
    • 84951956574 scopus 로고    scopus 로고
    • Virus evolution and transmission in an ever more connected world
    • Pybus O., Tatem A., Lemey P. 2015. Virus evolution and transmission in an ever more connected world. Proc. Roy. Soc. B 282:20142878.
    • (2015) Proc. Roy. Soc. B , vol.282 , pp. 20142878
    • Pybus, O.1    Tatem, A.2    Lemey, P.3
  • 70
    • 41349095584 scopus 로고    scopus 로고
    • Testing quantitative genetic hypotheses about the evolutionary rate matrix for continuous characters
    • Revell L., Harmon L. 2008. Testing quantitative genetic hypotheses about the evolutionary rate matrix for continuous characters. Evol. Ecol. Res. 10:311-331.
    • (2008) Evol. Ecol. Res. , vol.10 , pp. 311-331
    • Revell, L.1    Harmon, L.2
  • 71
    • 84855283706 scopus 로고    scopus 로고
    • A new phylogenetic method for identifying exceptional phenotypic diversification
    • Revell L., Mahler D., Peres-Neto P., Redelings B. 2012. A new phylogenetic method for identifying exceptional phenotypic diversification. Evolution 66:135-146.
    • (2012) Evolution , vol.66 , pp. 135-146
    • Revell, L.1    Mahler, D.2    Peres-Neto, P.3    Redelings, B.4
  • 72
    • 4344648036 scopus 로고    scopus 로고
    • Bayesian inference of character evolution
    • Ronquist F. 2004. Bayesian inference of character evolution. Trends Ecol. Evol. 19:475-481.
    • (2004) Trends Ecol. Evol. , vol.19 , pp. 475-481
    • Ronquist, F.1
  • 74
    • 0029883521 scopus 로고    scopus 로고
    • Bayesian hypothesis testing of four-taxon topologies using molecular sequence data
    • Sinsheimer J., Lake J., Little R. 1996. Bayesian hypothesis testing of four-taxon topologies using molecular sequence data. Biometrics 52:193-210.
    • (1996) Biometrics , vol.52 , pp. 193-210
    • Sinsheimer, J.1    Lake, J.2    Little, R.3
  • 75
    • 84870542995 scopus 로고    scopus 로고
    • Integrating fossils with molecular phylogenies improves inference of trait evolution
    • Slater G., Harmon L., Alfaro M. 2012a. Integrating fossils with molecular phylogenies improves inference of trait evolution. Evolution 66:3931-3944.
    • (2012) Evolution , vol.66 , pp. 3931-3944
    • Slater, G.1    Harmon, L.2    Alfaro, M.3
  • 76
    • 84857692151 scopus 로고    scopus 로고
    • Fitting models of continuous trait evolution to incompletely sampled comparative data using approximate Bayesian computation
    • Slater G., Harmon L., Wegmann D., Joyce P., Revell L., Alfaro M. 2012b. Fitting models of continuous trait evolution to incompletely sampled comparative data using approximate Bayesian computation. Evolution 66:752-762.
    • (2012) Evolution , vol.66 , pp. 752-762
    • Slater, G.1    Harmon, L.2    Wegmann, D.3    Joyce, P.4    Revell, L.5    Alfaro, M.6
  • 77
    • 84859984927 scopus 로고    scopus 로고
    • Rise of dinosaurs reveals major body-size transitions are driven by passive processes of trait evolution
    • Sookias R., Butler R., Benson R. 2012. Rise of dinosaurs reveals major body-size transitions are driven by passive processes of trait evolution. Proc. Roy. Soc. B 279:2180-2187.
    • (2012) Proc. Roy. Soc. B , vol.279 , pp. 2180-2187
    • Sookias, R.1    Butler, R.2    Benson, R.3
  • 78
    • 21444440302 scopus 로고    scopus 로고
    • Models for estimating Bayes factors with applications to phylogeny and tests of monophyly
    • Suchard M., Weiss R., Sinsheimer J. 2005. Models for estimating Bayes factors with applications to phylogeny and tests of monophyly. Biometrics 61:665-673.
    • (2005) Biometrics , vol.61 , pp. 665-673
    • Suchard, M.1    Weiss, R.2    Sinsheimer, J.3
  • 79
    • 33747174297 scopus 로고    scopus 로고
    • Comparative analyses of the influence of developmental mode on phenotypic diversification rates in shorebirds
    • Thomas G., Freckleton R., Szekely T. 2006. Comparative analyses of the influence of developmental mode on phenotypic diversification rates in shorebirds. Proc. Roy. Soc. B 273:1619-1624.
    • (2006) Proc. Roy. Soc. B , vol.273 , pp. 1619-1624
    • Thomas, G.1    Freckleton, R.2    Szekely, T.3
  • 81
    • 0033755804 scopus 로고    scopus 로고
    • Unprecedented degree of human immunodeficiency virus type 1 (HIV-1) group M genetic diversity in the Democratic Republic of Congo suggests that the HIV-1 pandemic originated in Central Africa
    • Vidal N., Peeters M., Mulanga-Kabeya C., Nzilambi N., Robertson D., Ilunga W., Sema H., Tshimanga K., Bongo B., Delaporte E. 2000. Unprecedented degree of human immunodeficiency virus type 1 (HIV-1) group M genetic diversity in the Democratic Republic of Congo suggests that the HIV-1 pandemic originated in Central Africa. J. Virol. 74:10498-10507.
    • (2000) J. Virol. , vol.74 , pp. 10498-10507
    • Vidal, N.1    Peeters, M.2    Mulanga-Kabeya, C.3    Nzilambi, N.4    Robertson, D.5    Ilunga, W.6    Sema, H.7    Tshimanga, K.8    Bongo, B.9    Delaporte, E.10
  • 82
    • 84921461476 scopus 로고    scopus 로고
    • Simultaneously estimating evolutionary history and repeated traits phylogenetic signal: Applications to viral and host phenotypic evolution
    • Vrancken B., Lemey P., Rambaut A., Bedford T., Longdon B., Günthard H. F., Suchard M. A. 2015. Simultaneously estimating evolutionary history and repeated traits phylogenetic signal: applications to viral and host phenotypic evolution. Methods Ecol. Evol. 6:67-82.
    • (2015) Methods Ecol. Evol. , vol.6 , pp. 67-82
    • Vrancken, B.1    Lemey, P.2    Rambaut, A.3    Bedford, T.4    Longdon, B.5    Günthard, H.F.6    Suchard, M.A.7
  • 83
    • 44049108744 scopus 로고    scopus 로고
    • Toward an AIDS vaccine
    • Walker B., Burton D. 2008. Toward an AIDS vaccine. Science 320:760-764.
    • (2008) Science , vol.320 , pp. 760-764
    • Walker, B.1    Burton, D.2
  • 87
    • 84942880540 scopus 로고    scopus 로고
    • Lessons from Ebola: Improving infectious disease surveillance to inform outbreak management
    • Woolhouse M., Rambaut A., Kellam P. 2015. Lessons from Ebola: Improving infectious disease surveillance to inform outbreak management. Sci. Transl. Med. 7:307rv5.
    • (2015) Sci. Transl. Med. , vol.7 , pp. 307rv5
    • Woolhouse, M.1    Rambaut, A.2    Kellam, P.3
  • 89
    • 0028064845 scopus 로고
    • Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: Approximate methods
    • Yang Z. 1994. Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods. J. Mol. Evol. 39:306-314.
    • (1994) J. Mol. Evol. , vol.39 , pp. 306-314
    • Yang, Z.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.