-
1
-
-
10244251690
-
UniProt archive
-
Rasko Leinonen, Federico Garcia Diez, David Binns, Wolfgang Fleischmann, Rodrigo Lopez, and Rolf Apweiler. UniProt archive. Bioinformatics, 20(17): 3236-3237, 2004.
-
(2004)
Bioinformatics
, vol.20
, Issue.17
, pp. 3236-3237
-
-
Leinonen, R.1
Diez, F.G.2
Binns, D.3
Fleischmann, W.4
Lopez, R.5
Apweiler, R.6
-
3
-
-
84872521100
-
Improved contact prediction in proteins: Using pseudolikelihoods to infer potts models
-
Magnus Ekeberg, Cecilia Lövkvist, Yueheng Lan, Martin Weigt, and Erik Aurell. Improved contact prediction in proteins: Using pseudolikelihoods to infer Potts models. Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, 87(1): 1-19, 2013.
-
(2013)
Physical Review e - Statistical, Nonlinear, and Soft Matter Physics
, vol.87
, Issue.1
, pp. 1-19
-
-
Ekeberg, M.1
Lövkvist, C.2
Lan, Y.3
Weigt, M.4
Aurell, E.5
-
4
-
-
83755178457
-
Direct-coupling analysis of residue coevolution captures native contacts across many protein families
-
Faruck Morcos, Andrea Pagnani, Bryan Lunt, Arianna Bertolino, Debora S Marks, Chris Sander, Riccardo Zecchina, José N Onuchic, Terence Hwa, and Martin Weigt. Direct-coupling analysis of residue coevolution captures native contacts across many protein families. Proceedings of the National Academy of Sciences of the United States of America, 108(49): E1293-301, 2011.
-
(2011)
Proceedings of the National Academy of Sciences of the United States of America
, vol.108
, Issue.49
, pp. E1293-E1301
-
-
Morcos, F.1
Pagnani, A.2
Lunt, B.3
Bertolino, A.4
Marks, D.S.5
Sander, C.6
Zecchina, R.7
Onuchic, J.N.8
Hwa, T.9
Weigt, M.10
-
5
-
-
84908313189
-
Improving contact prediction along three dimensions
-
Christoph Feinauer, Marcin J. Skwark, Andrea Pagnani, and Erik Aurell. Improving contact prediction along three dimensions. PLOS Computational Biology, 10(10): e1003847, 2014.
-
(2014)
PLOS Computational Biology
, vol.10
, Issue.10
, pp. e1003847
-
-
Feinauer, C.1
Skwark, M.J.2
Pagnani, A.3
Aurell, E.4
-
6
-
-
38849115223
-
Mutual information without the influence of phylogeny or entropy dramatically improves residue contact prediction
-
S. D. Dunn, L. M. Wahl, and G. B. Gloor. Mutual information without the influence of phylogeny or entropy dramatically improves residue contact prediction. Bioinformatics, 24(3): 333-340, 2008.
-
(2008)
Bioinformatics
, vol.24
, Issue.3
, pp. 333-340
-
-
Dunn, S.D.1
Wahl, L.M.2
Gloor, G.B.3
-
7
-
-
0000359337
-
Backpropagation applied to handwritten ZIP code recognition
-
Y. LeCun, B. Boser, J. S. Denker, D. Henderson, R. E. Howard, W. Hubbard, and L. D. Jackel. Backpropagation applied to handwritten ZIP code recognition. Neural Computation, 1(4): 541-551, 1989.
-
(1989)
Neural Computation
, vol.1
, Issue.4
, pp. 541-551
-
-
LeCun, Y.1
Boser, B.2
Denker, J.S.3
Henderson, D.4
Howard, R.E.5
Hubbard, W.6
Jackel, L.D.7
-
8
-
-
58649113008
-
The graph neural network model
-
Franco Scarselli, Marco Gori, Ah Chung Tsoi, Markus Hagenbuchner, and Gabriele Monfardini. The graph neural network model. IEEE Transactions on Neural Networks, 20(1): 61-80, 2009.
-
(2009)
IEEE Transactions on Neural Networks
, vol.20
, Issue.1
, pp. 61-80
-
-
Scarselli, F.1
Gori, M.2
Tsoi, A.C.3
Hagenbuchner, M.4
Monfardini, G.5
-
11
-
-
84965159799
-
Convolutional networks on graphs for learning molecular fingerprints
-
David K Duvenaud, Dougal Maclaurin, Jorge Iparraguirre, Rafael Bombarell, Timothy Hirzel, Alan Aspuru-Guzik, and Ryan P Adams. Convolutional Networks on Graphs for Learning Molecular Fingerprints. Advances in Neural Information Processing Systems 28, pages 2215-2223, 2015.
-
(2015)
Advances in Neural Information Processing Systems
, vol.28
, pp. 2215-2223
-
-
Duvenaud, D.K.1
Maclaurin, D.2
Iparraguirre, J.3
Bombarell, R.4
Hirzel, T.5
Aspuru-Guzik, A.6
Adams, R.P.7
-
13
-
-
84968548037
-
q-space deep learning: Twelve-fold shorter and model-free diffusion MRI scans
-
Vladimir Golkov, Alexey Dosovitskiy, Jonathan Sperl, Marion Menzel, Michael Czisch, Philipp Samann, Thomas Brox, and Daniel Cremers. q-Space deep learning: twelve-fold shorter and model-free diffusion MRI scans. IEEE Transactions on Medical Imaging, 35(5): 1344-1351, 2016.
-
(2016)
IEEE Transactions on Medical Imaging
, vol.35
, Issue.5
, pp. 1344-1351
-
-
Golkov, V.1
Dosovitskiy, A.2
Sperl, J.3
Menzel, M.4
Czisch, M.5
Samann, P.6
Brox, T.7
Cremers, D.8
-
14
-
-
84954310140
-
The loss surfaces of multilayer networks
-
Anna Choromanska, Mikael Henaff, Michael Mathieu, Gérard Ben Arous, and Yann LeCun. The loss surfaces of multilayer networks. Journal of Machine Learning Research: Workshop and Conference Proceedings, 38: 192-204, 2015.
-
(2015)
Journal of Machine Learning Research: Workshop and Conference Proceedings
, vol.38
, pp. 192-204
-
-
Choromanska, A.1
Henaff, M.2
Mathieu, M.3
Ben Arous, G.4
LeCun, Y.5
-
17
-
-
0032979568
-
Importance of long-range interactions in protein folding
-
M Michael Gromiha and Samuel Selvaraj. Importance of long-range interactions in protein folding. Biophysical Chemistry, 77(1): 49-68, 1999.
-
(1999)
Biophysical Chemistry
, vol.77
, Issue.1
, pp. 49-68
-
-
Michael Gromiha, M.1
Selvaraj, S.2
-
18
-
-
84929144039
-
MetaPSICOV: Combining co-evolution methods for accurate prediction of contacts and long range hydrogen bonding in proteins
-
David T. Jones, Tanya Singh, Tomasz Kosciolek, and Stuart Tetchner. MetaPSICOV: Combining co-evolution methods for accurate prediction of contacts and long range hydrogen bonding in proteins. Bioinformatics, 31(7): 999-1006, 2015.
-
(2015)
Bioinformatics
, vol.31
, Issue.7
, pp. 999-1006
-
-
Jones, D.T.1
Singh, T.2
Kosciolek, T.3
Tetchner, S.4
-
19
-
-
84939515755
-
Accurate contact predictions using covariation techniques and machine learning
-
Tomasz Kosciolek and David T. Jones. Accurate contact predictions using covariation techniques and machine learning. Proteins: Structure, Function and Bioinformatics, 84(Suppl 1): 145-151, 2016.
-
(2016)
Proteins: Structure, Function and Bioinformatics
, vol.84
, pp. 145-151
-
-
Kosciolek, T.1
Jones, D.T.2
|