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Volumn 33, Issue 5, 2017, Pages 782-783

Calypso: A user-friendly web-server for mining and visualizing microbiome-environment interactions

Author keywords

[No Author keywords available]

Indexed keywords

RNA 16S;

EID: 85019197739     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btw725     Document Type: Article
Times cited : (512)

References (9)
  • 1
    • 84942197900 scopus 로고    scopus 로고
    • The coral core microbiome identifies rare bacterial taxa as ubiquitous endosymbionts
    • Ainsworth,T.D. et al. (2015) The coral core microbiome identifies rare bacterial taxa as ubiquitous endosymbionts. ISME J., 9, 2261-2274.
    • (2015) ISME J. , vol.9 , pp. 2261-2274
    • Ainsworth, T.D.1
  • 2
    • 84864462144 scopus 로고    scopus 로고
    • METAGENassist: A comprehensive web server for comparative metagenomics
    • Arndt,D. et al. (2012) METAGENassist: a comprehensive web server for comparative metagenomics. Nucleic Acids Res., 40, W88-W95.
    • (2012) Nucleic Acids Res. , vol.40 , pp. W88-W95
    • Arndt, D.1
  • 3
    • 84922032616 scopus 로고    scopus 로고
    • Impact of experimental hookworm infection on the human gut microbiota
    • Cantacessi,C. et al. (2014) Impact of experimental hookworm infection on the human gut microbiota. J. Infect. Dis., 210, 1431-1434.
    • (2014) J. Infect. Dis. , vol.210 , pp. 1431-1434
    • Cantacessi, C.1
  • 4
    • 70349993601 scopus 로고    scopus 로고
    • ShotgunFunctionalizeR: An R-package for functional comparison of metagenomes
    • Kristiansson,E. et al. (2009) ShotgunFunctionalizeR: an R-package for functional comparison of metagenomes. Bioinformatics, 25, 2737-2738.
    • (2009) Bioinformatics , vol.25 , pp. 2737-2738
    • Kristiansson, E.1
  • 5
    • 84876427223 scopus 로고    scopus 로고
    • Phyloseq: An R package for reproducible interactive analysis and graphics of microbiome census data
    • McMurdie,P.J. and Holmes,S. (2013) phyloseq: an R package for reproducible interactive analysis and graphics of microbiome census data. PloS One, 8, e61217.
    • (2013) PloS One , vol.8
    • McMurdie, P.J.1    Holmes, S.2
  • 6
    • 84911429654 scopus 로고    scopus 로고
    • STAMP: Statistical analysis of taxonomic and functional profiles
    • Parks,D.H. et al. (2014) STAMP: statistical analysis of taxonomic and functional profiles. Bioinformatics, 30, 3123-3124.
    • (2014) Bioinformatics , vol.30 , pp. 3123-3124
    • Parks, D.H.1
  • 7
    • 84888865593 scopus 로고    scopus 로고
    • Differential abundance analysis for microbial marker-gene surveys
    • Paulson,J.N. et al. (2013) Differential abundance analysis for microbial marker-gene surveys. Nat. Methods, 10, 1200-1202.
    • (2013) Nat. Methods , vol.10 , pp. 1200-1202
    • Paulson, J.N.1
  • 8
    • 84873052852 scopus 로고    scopus 로고
    • FANTOM: Functional and taxonomic analysis of metagenomes
    • Sanli,K. et al. (2013) FANTOM: Functional and taxonomic analysis of metagenomes. BMC Bioinf., 14, 38.
    • (2013) BMC Bioinf. , vol.14 , pp. 38
    • Sanli, K.1
  • 9
    • 84901767891 scopus 로고    scopus 로고
    • Scabies mites alter the skin microbiome and promote growth of opportunistic pathogens in a porcine model
    • Swe,P.M. et al. (2014) Scabies mites alter the skin microbiome and promote growth of opportunistic pathogens in a porcine model. PLoS Negl. Trop. Dis., 8, e2897.
    • (2014) PLoS Negl. Trop. Dis. , vol.8
    • Swe, P.M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.